Factsheet for HORVU2Hr1G057870.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol
MultiLoc:	cytosol
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
HORVU0Hr1G032230.4
HORVU1Hr1G068220.1
HORVU2Hr1G016580.5
HORVU3Hr1G019230.6
HORVU3Hr1G042790.4
HORVU3Hr1G042830.1
HORVU3Hr1G079010.5
HORVU4Hr1G019530.1
HORVU4Hr1G052330.3
HORVU5Hr1G032550.3
HORVU6Hr1G075650.1
HORVU7Hr1G038130.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G03850.1	HORVU4Hr1G019530.1	AT4G09570.1	19130088
AT1G03850.1	HORVU5Hr1G032550.3	AT4G09570.1	19130088
AT1G28480.1	HORVU3Hr1G019230.6	AT1G64280.1	17397508
AT1G28480.1	HORVU6Hr1G075650.1	AT3G47620.1	21798944
AT1G28480.1	HORVU7Hr1G038130.1	AT3G47620.1	21798944
AT1G28480.1	HORVU0Hr1G032230.4	AT5G06960.1	21798944
AT1G28480.1	HORVU1Hr1G068220.1	AT5G06960.1	21798944
AT1G28480.1	HORVU2Hr1G016580.5	AT5G06960.1	21798944
AT1G28480.1	HORVU3Hr1G042790.4	AT5G06960.1	21798944
AT1G28480.1	HORVU3Hr1G042830.1	AT5G06960.1	21798944
AT1G28480.1	HORVU3Hr1G079010.5	AT5G06960.1	21798944
AT1G28480.1	HORVU4Hr1G052330.3	AT5G06960.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6B01G132800.1	Wheat	cytosol	68.52	79.29
TraesCS3A01G147400.1	Wheat	cytosol, plastid	66.05	75.89
HORVU1Hr1G092260.1	Barley	mitochondrion	69.75	74.34
TraesCS2A01G232700.1	Wheat	cytosol	59.26	70.59
TraesCS5A01G096900.1	Wheat	cytosol	41.36	70.53
TraesCS5A01G064100.1	Wheat	cytosol	58.64	68.84
TraesCS4A01G254400.1	Wheat	plastid	56.17	65.47
HORVU1Hr1G087600.1	Barley	plastid	74.69	64.02
GSMUA_Achr6P27020_001	Banana	cytosol	35.19	60.64
HORVU3Hr1G061080.1	Barley	plastid	51.23	59.71
TraesCS4A01G254500.1	Wheat	plastid	53.7	59.18
OQU78423	Sorghum	cytosol, mitochondrion	54.32	59.06
Zm00001d009568_P001	Maize	cytosol	48.77	58.96
HORVU1Hr1G087630.3	Barley	mitochondrion	64.2	58.76
Zm00001d039011_P001	Maize	cytosol	51.23	57.64
GSMUA_Achr3P15490_001	Banana	plastid	41.98	57.63
HORVU3Hr1G065250.1	Barley	plastid	56.17	54.17
GSMUA_Achr1P13880_001	Banana	cytosol, extracellular	33.95	51.4
KRH10949	Soybean	cytosol	41.36	50.38
CDX94626	Canola	cytosol	38.89	49.22
AT1G28480.1	Thale cress	cytosol	40.12	47.45
KRH21345	Soybean	plastid	38.89	47.37
KRH20376	Soybean	plastid	39.51	47.06
CDY30815	Canola	cytosol	37.04	46.88
CDY15662	Canola	cytosol	37.04	46.88
VIT_12s0028g03010.t01	Wine grape	cytosol	40.74	46.81
Solyc10g008150.1.1	Tomato	cytosol	30.86	45.87
Bra030545.1-P	Field mustard	cytosol	26.54	45.74
CDY34097	Canola	cytosol	38.27	45.26
Bra032911.1-P	Field mustard	cytosol	38.27	45.26
HORVU2Hr1G026710.1	Barley	cytosol	30.86	44.64
Bra030102.1-P	Field mustard	cytosol	37.04	44.12
Solyc10g008930.1.1	Tomato	cytosol	33.33	42.52
VIT_10s0003g00390.t01	Wine grape	cytosol	38.89	42.0
KRH26996	Soybean	mitochondrion	39.51	40.0
Solyc07g053550.1.1	Tomato	cytosol	36.42	39.86
PGSC0003DMT400024317	Potato	plastid	36.42	39.33
PGSC0003DMT400056253	Potato	plastid	33.95	38.19
KRH22331	Soybean	mitochondrion	39.51	36.78
HORVU3Hr1G032820.1	Barley	plastid	33.95	35.71
KRH25663	Soybean	cytosol, plastid	37.65	35.26
KRH55866	Soybean	cytosol, plastid	36.42	34.3
VIT_00s0199g00290.t01	Wine grape	extracellular	24.69	33.61
Solyc02g077580.1.1	Tomato	cytosol, plastid	29.63	33.57
CDY18190	Canola	plastid	29.63	30.97
Bra015272.1-P	Field mustard	plastid	29.01	30.32
PGSC0003DMT400058776	Potato	plastid	33.33	30.0
CDY32516	Canola	plastid	28.4	29.87
CDY10096	Canola	plastid	28.4	29.87
Bra032540.1-P	Field mustard	plastid	28.4	29.87
CDX89861	Canola	plastid	28.4	29.68
AT1G03850.1	Thale cress	cytosol	25.31	25.79
CDY44992	Canola	cytosol	29.63	24.87

Protein Annotations

MapMan:18.8.2	Gene3D:3.40.30.10	UniProt:A0A287I3H7	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575
GO:GO:0005623	GO:GO:0006091	GO:GO:0008150	GO:GO:0008152	GO:GO:0009055	GO:GO:0009987
GO:GO:0015035	GO:GO:0019725	GO:GO:0022900	GO:GO:0045454	GO:GO:0055114	InterPro:GlrX-like_pln_2
InterPro:Glutaredoxin	EnsemblPlantsGene:HORVU2Hr1G057870	EnsemblPlants:HORVU2Hr1G057870.1	InterPro:IPR002109	PFscan:PS51354	PANTHER:PTHR10168
PANTHER:PTHR10168:SF199	SUPFAM:SSF52833	TIGRFAMs:TIGR02189	InterPro:Thioredoxin-like_sf	UniParc:UPI000B47AC45	SEG:seg

Description

No Description!

Coordinates

chrchr2H:-:373687881..373688371

Molecular Weight (calculated)

17027.4 Da

IEP (calculated)

6.519

GRAVY (calculated)

-0.123

Length

162 amino acids

Sequence
(BLAST)

001: HGRKPNRASH PVEKAANREE EEDDRARPVE MYQAIPYSAG RLPAWPRRSE QAEAEGAGGQ EGASARGDGG EAVRQAVAES PVLVVGRRGC CLTHVVKRLL
101: QGLGVNLAVY EVAAAVTGDE AVVALPAVLV GGRLLGGLDR LMAVHISGEL VPILKDAGAL WL

Best Arabidopsis Sequence Match ( AT1G28480.1 )
(BLAST)

001: MQGTISCARN YNMTTTVGES LRPLSLKTQG NGERVRMVVE ENAVIVIGRR GCCMCHVVRR LLLGLGVNPA VLEIDEERED EVLSELENIG VQGGGGTVKL
101: PAVYVGGRLF GGLDRVMATH ISGELVPILK EVGALWL

Arabidopsis Description

GRXC9Glutaredoxin-C9 [Source:UniProtKB/Swiss-Prot;Acc:Q9SGP6]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.