Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 5
- mitochondrion 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT1G03850.1 | CDX90725 | AT4G09570.1 | 19130088 |
| AT1G03850.1 | CDY05064 | AT4G09570.1 | 19130088 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra015272.1-P | Field mustard | plastid | 96.77 | 96.77 |
| CDY18190 | Canola | plastid | 93.55 | 93.55 |
| CDY32516 | Canola | plastid | 70.97 | 71.43 |
| CDY10096 | Canola | plastid | 70.32 | 70.78 |
| CDY44992 | Canola | cytosol | 69.03 | 55.44 |
| GSMUA_Achr3P15490_001 | Banana | plastid | 37.42 | 49.15 |
| AT1G03850.1 | Thale cress | cytosol | 50.32 | 49.06 |
| Solyc10g008150.1.1 | Tomato | cytosol | 32.9 | 46.79 |
| GSMUA_Achr6P27020_001 | Banana | cytosol | 27.74 | 45.74 |
| TraesCS5A01G096900.1 | Wheat | cytosol | 26.45 | 43.16 |
| TraesCS7D01G442400.1 | Wheat | cytosol | 30.32 | 42.34 |
| CDY15662 | Canola | cytosol | 34.84 | 42.19 |
| VIT_12s0028g03010.t01 | Wine grape | cytosol | 38.06 | 41.84 |
| CDX94626 | Canola | cytosol | 34.19 | 41.41 |
| GSMUA_Achr1P13880_001 | Banana | cytosol, extracellular | 28.39 | 41.12 |
| GSMUA_Achr10P... | Banana | cytosol | 31.61 | 40.16 |
| Solyc07g053550.1.1 | Tomato | cytosol | 38.06 | 39.86 |
| CDY30815 | Canola | cytosol | 32.26 | 39.06 |
| PGSC0003DMT400056253 | Potato | plastid | 36.13 | 38.89 |
| HORVU3Hr1G061080.1 | Barley | plastid | 34.84 | 38.85 |
| Zm00001d009568_P001 | Maize | cytosol | 33.55 | 38.81 |
| TraesCS3B01G194500.1 | Wheat | cytosol | 27.74 | 38.39 |
| TraesCS3D01G169500.1 | Wheat | cytosol | 27.74 | 38.39 |
| PGSC0003DMT400024317 | Potato | plastid | 36.77 | 38.0 |
| TraesCS3B01G272600.1 | Wheat | plastid | 33.55 | 37.96 |
| KRH55866 | Soybean | cytosol, plastid | 41.94 | 37.79 |
| TraesCS3D01G244800.1 | Wheat | plastid | 33.55 | 37.68 |
| KRH26996 | Soybean | mitochondrion | 38.71 | 37.5 |
| HORVU2Hr1G026710.1 | Barley | cytosol | 27.1 | 37.5 |
| CDY34097 | Canola | cytosol | 32.9 | 37.23 |
| KRH25663 | Soybean | cytosol, plastid | 41.29 | 36.99 |
| TraesCS3A01G246700.1 | Wheat | plastid | 32.9 | 36.96 |
| Zm00001d039011_P001 | Maize | cytosol | 34.19 | 36.81 |
| Os01t0667900-01 | Rice | cytosol | 34.84 | 36.73 |
| TraesCS1D01G405200.1 | Wheat | plastid | 30.97 | 36.36 |
| TraesCS2B01G174000.1 | Wheat | cytosol | 25.81 | 35.71 |
| TraesCS2A01G149100.1 | Wheat | cytosol | 25.81 | 35.71 |
| GSMUA_Achr7P10990_001 | Banana | cytosol | 33.55 | 35.62 |
| OQU78423 | Sorghum | cytosol, mitochondrion | 34.19 | 35.57 |
| KRH22331 | Soybean | mitochondrion | 39.35 | 35.06 |
| TraesCS1B01G425500.1 | Wheat | cytosol | 30.32 | 34.56 |
| CDX70434 | Canola | cytosol, plastid | 30.97 | 34.29 |
| CDX78456 | Canola | plastid | 30.97 | 34.29 |
| TraesCS6B01G132800.1 | Wheat | cytosol | 30.32 | 33.57 |
| TraesCS1B01G425200.1 | Wheat | plastid | 30.97 | 33.33 |
| CDX68934 | Canola | cytosol | 30.97 | 33.33 |
| TraesCS1D01G404800.1 | Wheat | cytosol | 30.97 | 33.1 |
| TraesCS1A01G396900.1 | Wheat | cytosol | 30.97 | 33.1 |
| CDX75319 | Canola | cytosol | 30.32 | 32.64 |
| Os01t0241400-01 | Rice | cytosol, plastid | 28.39 | 32.35 |
| HORVU1Hr1G092260.1 | Barley | mitochondrion | 31.61 | 32.24 |
| CDX69718 | Canola | cytosol, plastid | 29.03 | 32.14 |
| CDX97156 | Canola | cytosol, plastid | 29.03 | 32.14 |
| Zm00001d011543_P001 | Maize | extracellular | 32.9 | 32.08 |
| TraesCS4A01G254500.1 | Wheat | plastid | 30.32 | 31.97 |
| CDX72386 | Canola | cytosol | 29.03 | 31.91 |
| CDY13515 | Canola | cytosol | 29.03 | 31.91 |
| TraesCS5A01G064100.1 | Wheat | cytosol | 28.39 | 31.88 |
| EES03406 | Sorghum | cytosol, plastid | 34.19 | 31.55 |
| Zm00001d043932_P001 | Maize | cytosol | 32.26 | 31.45 |
| CDY28280 | Canola | cytosol | 29.03 | 31.25 |
| CDY45025 | Canola | cytosol | 29.03 | 31.25 |
| TraesCS4A01G254400.1 | Wheat | plastid | 27.74 | 30.94 |
| TraesCS2A01G232700.1 | Wheat | cytosol | 27.1 | 30.88 |
| TraesCS3A01G147400.1 | Wheat | cytosol, plastid | 27.74 | 30.5 |
| GSMUA_Achr2P15240_001 | Banana | cytosol, endoplasmic reticulum, mitochondrion, plastid | 33.55 | 30.23 |
| TraesCS1A01G397200.1 | Wheat | plastid | 31.61 | 29.7 |
| HORVU3Hr1G032820.1 | Barley | plastid | 28.39 | 28.57 |
| HORVU2Hr1G057870.1 | Barley | cytosol | 29.68 | 28.4 |
| HORVU1Hr1G087630.3 | Barley | mitochondrion | 31.61 | 27.68 |
| HORVU3Hr1G065250.1 | Barley | plastid | 29.03 | 26.79 |
| TraesCS2D01G153900.1 | Wheat | cytosol | 27.74 | 25.6 |
| HORVU1Hr1G087600.1 | Barley | plastid | 30.97 | 25.4 |
| TraesCS3A01G163500.1 | Wheat | plastid | 25.81 | 23.81 |
Protein Annotations
| MapMan:18.8.2 | Gene3D:3.40.30.10 | GO:A0A078DKT9 | EnsemblPlants:CDX89861 | ProteinID:CDX89861 | ProteinID:CDX89861.1 |
| GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005575 | GO:GO:0005623 | GO:GO:0008150 | GO:GO:0009055 |
| GO:GO:0009987 | GO:GO:0015035 | GO:GO:0019725 | GO:GO:0045454 | EnsemblPlantsGene:GSBRNA2T00150324001 | InterPro:GlrX-like_pln_2 |
| InterPro:Glutaredoxin | InterPro:IPR002109 | PFAM:PF00462 | PFscan:PS51354 | PANTHER:PTHR10168 | PANTHER:PTHR10168:SF111 |
| SUPFAM:SSF52833 | TIGRFAMs:TIGR02189 | InterPro:Thioredoxin-like_sf | UniParc:UPI0004EE7750 | SEG:seg | : |
Description
BnaA10g02210D
Coordinates
chrLK031861:+:439395..440004
Molecular Weight (calculated)
16947.5 Da
IEP (calculated)
9.209
GRAVY (calculated)
-0.154
Length
155 amino acids
Sequence
(BLAST)
(BLAST)
001: MQKAIRAYES SWTKTTSANS IFRPKNEDKP SSSLSWLTSS PSPQKPSSSS TKKSSYNVLV MENAVVVFAR KGCCMGHVVK RLLLTHGVNP LVVEIDEEDN
101: NDMIISDLGK TVINKENLPV MFIGGKLFGG LENLMAAHIN GDLVPTLRQA GALWL
101: NDMIISDLGK TVINKENLPV MFIGGKLFGG LENLMAAHIN GDLVPTLRQA GALWL
001: MQKAIRPYES PWTKTVPGNS IFLLKNEDKP SSSSSSLSWL TSGSPKPTSI SNKRSSNLVV MENAVVVFAR RGCCLGHVAK RLLLTHGVNP VVVEIGEEDN
101: NNYDNIVSDK EKLPMMYIGG KLFGGLENLM AAHINGDLVP TLRQAGALWL
101: NNYDNIVSDK EKLPMMYIGG KLFGGLENLM AAHINGDLVP TLRQAGALWL
Arabidopsis Description
Glutaredoxin family protein [Source:TAIR;Acc:AT1G03850]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.