Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- plastid 3
- cytosol 3
- mitochondrion 1
Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
GSMUA_AchrUn_... | Banana | cytosol | 82.73 | 36.86 |
VIT_02s0109g00360.t01 | Wine grape | cytosol | 75.54 | 33.87 |
PGSC0003DMT400013477 | Potato | cytosol | 71.22 | 32.89 |
VIT_16s0039g02670.t01 | Wine grape | cytosol | 71.22 | 32.14 |
Os03t0240500-01 | Rice | plastid | 75.54 | 32.11 |
KXG39799 | Sorghum | cytosol | 74.82 | 31.9 |
TraesCS4A01G072800.1 | Wheat | golgi, plastid | 74.82 | 31.9 |
TraesCS4B01G228900.1 | Wheat | cytosol | 74.82 | 31.9 |
TraesCS4D01G230000.1 | Wheat | cytosol | 74.82 | 31.9 |
Solyc05g052160.2.1 | Tomato | plastid | 68.35 | 31.56 |
PGSC0003DMT400030414 | Potato | cytosol, plastid | 67.63 | 31.23 |
Zm00001d028373_P002 | Maize | cytosol | 74.82 | 31.14 |
AT5G05000.3 | Thale cress | cytosol | 69.78 | 30.99 |
KRG94982 | Soybean | cytosol | 69.06 | 30.77 |
CDY55323 | Canola | cytosol | 64.75 | 30.3 |
AT1G02280.1 | Thale cress | cytosol | 64.75 | 30.3 |
CDX98810 | Canola | cytosol | 67.63 | 30.03 |
CDY32453 | Canola | cytosol | 64.03 | 29.97 |
Bra032612.1-P | Field mustard | cytosol | 64.03 | 29.97 |
CDY15228 | Canola | cytosol | 64.03 | 29.87 |
CDX89987 | Canola | cytosol | 64.03 | 29.87 |
Bra033311.1-P | Field mustard | cytosol | 64.03 | 29.87 |
CDY52130 | Canola | cytosol, plastid | 66.91 | 29.71 |
KRH64901 | Soybean | cytosol | 66.91 | 29.71 |
CDX80936 | Canola | cytosol | 66.19 | 29.39 |
HORVU4Hr1G064110.2 | Barley | cytosol | 74.82 | 29.21 |
Solyc03g095220.2.1 | Tomato | plastid | 53.96 | 28.96 |
Zm00001d047965_P002 | Maize | cytosol | 73.38 | 28.81 |
Bra009405.1-P | Field mustard | cytosol | 66.91 | 12.48 |
CDX70178 | Canola | cytosol | 66.91 | 12.25 |
GSMUA_Achr1P09910_001 | Banana | mitochondrion | 26.62 | 4.88 |
GSMUA_Achr9P31010_001 | Banana | cytosol | 30.22 | 4.25 |
GSMUA_Achr8P19440_001 | Banana | cytosol | 35.97 | 4.16 |
GSMUA_Achr9P31000_001 | Banana | cytosol | 31.65 | 4.03 |
GSMUA_Achr6P20360_001 | Banana | cytosol | 30.22 | 3.71 |
GSMUA_Achr11P... | Banana | cytosol | 35.25 | 3.48 |
CDX98809 | Canola | cytosol | 0.0 | 0.0 |
Protein Annotations
EnsemblPlants:GSMUA_Achr1P22210_001 | EnsemblPlants:GSMUA_Achr1T22210_001 | EnsemblPlantsGene:GSMUA_Achr1G22210_001 | Gene3D:3.40.50.300 | GO:GO:0000166 | GO:GO:0003674 |
GO:GO:0005488 | GO:GO:0005525 | InterPro:G_AIG1 | InterPro:IPR006703 | InterPro:P-loop_NTPase | PANTHER:PTHR10903 |
PANTHER:PTHR10903:SF43 | PFAM:PF04548 | PFscan:PS51720 | SUPFAM:SSF52540 | UniParc:UPI000294B8FF | UniProt:M0S229 |
MapMan:23.1.2.3 | : | : | : | : | : |
Description
Translocase of chloroplast 34, chloroplastic [Source:GMGC_GENE;Acc:GSMUA_Achr1G22210_001]
Coordinates
chr1:-:16667190..16668296
Molecular Weight (calculated)
15604.8 Da
IEP (calculated)
6.531
GRAVY (calculated)
-0.102
Length
139 amino acids
Sequence
(BLAST)
(BLAST)
001: MAAKIDHEWT GIRQFPFGTQ NKLHELLGKL KQEAGVGKSS TVNSILGEKV ATVSAFQSEG LRPAMCSRTR AGFTLNIIDT PGFVEDGYVN EQSLEILERF
101: LLNKTIDILL YVDWLDAYRV DSLDRLVIRA ITDTFGKRI
101: LLNKTIDILL YVDWLDAYRV DSLDRLVIRA ITDTFGKRI
001: MAALQTLREW IGIQQFPPAT QSKLLEILGK YKEEDVSSLT VLVMGKGGVG KSSTVNSVIG EKAAAVSTFQ SEGLRPTLVS RTRSGFTLNI IDTPGLIEGG
101: YVNDQAINII KRFLLNMTID VLLYVDRLDV YRVDDLDRQV VGAITDAFGK EIWKKSALVL THAQFSPPDG LNYNHFVSKR SNALLKVIQT GAQLKKQDLQ
201: GFSIPVILVE NSGRCHKNES DEKILPCGTS WIPNLFNKIT EISFNGNKAI HVDKKLVEGP NPNERGKKLI PLMFAFQYLL VMKPLVRAIK SDVSRESKPA
301: WELRDSGLAS RRS
101: YVNDQAINII KRFLLNMTID VLLYVDRLDV YRVDDLDRQV VGAITDAFGK EIWKKSALVL THAQFSPPDG LNYNHFVSKR SNALLKVIQT GAQLKKQDLQ
201: GFSIPVILVE NSGRCHKNES DEKILPCGTS WIPNLFNKIT EISFNGNKAI HVDKKLVEGP NPNERGKKLI PLMFAFQYLL VMKPLVRAIK SDVSRESKPA
301: WELRDSGLAS RRS
Arabidopsis Description
TOC34Translocase of chloroplast 34, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q38906]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.