Factsheet for GSMUA_Achr1P09910_001

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 2
mitochondrion 4
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_11s0118g00260.t01	Wine grape	cytosol, mitochondrion, plastid	55.67	52.88
Solyc07g007650.1.1	Tomato	cytosol	37.47	52.3
TraesCS5D01G120200.1	Wheat	mitochondrion	53.56	51.72
Os12t0197400-01	Rice	mitochondrion	53.69	51.72
HORVU5Hr1G031380.1	Barley	mitochondrion	53.69	51.58
TraesCS5A01G112900.1	Wheat	mitochondrion	53.3	51.53
TraesCS5B01G109100.1	Wheat	mitochondrion	53.17	51.27
Zm00001d035254_P001	Maize	plastid	52.64	50.89
EES15811	Sorghum	mitochondrion	52.51	50.64
KRH20190	Soybean	cytosol	51.85	49.43
KRH03616	Soybean	mitochondrion	51.85	49.37
PGSC0003DMT400078922	Potato	endoplasmic reticulum	53.69	48.63
Bra002291.1-P	Field mustard	cytosol	46.97	45.47
CDY35813	Canola	cytosol	46.97	45.47
CDX92471	Canola	cytosol	46.97	45.47
AT5G20300.4	Thale cress	cytosol	47.23	45.15
GSMUA_Achr9P31010_001	Banana	cytosol	37.99	29.12
GSMUA_AchrUn_...	Banana	cytosol	11.87	28.85
GSMUA_Achr1P22210_001	Banana	cytosol	4.88	26.62
GSMUA_Achr9P31000_001	Banana	cytosol	35.36	24.54
GSMUA_Achr8P19440_001	Banana	cytosol	33.38	21.07
GSMUA_Achr11P...	Banana	cytosol	34.56	18.58
GSMUA_Achr6P20360_001	Banana	cytosol	26.65	17.86

Protein Annotations

MapMan:23.1.2.2	Gene3D:3.40.50.300	GO:GO:0000166	GO:GO:0003674	GO:GO:0005488	GO:GO:0005525
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0006810	GO:GO:0008150	GO:GO:0045036
EnsemblPlantsGene:GSMUA_Achr1G09910_001	EnsemblPlants:GSMUA_Achr1P09910_001	EnsemblPlants:GSMUA_Achr1T09910_001	InterPro:G_AIG1	InterPro:IPR006703	UniProt:M0RYK0
InterPro:P-loop_NTPase	PFAM:PF04548	PFAM:PF11886	PFscan:PS51720	PANTHER:PTHR10903	PANTHER:PTHR10903:SF68
SUPFAM:SSF52540	InterPro:TOC159_MAD	UniParc:UPI000295100E	SEG:seg	:	:

Description

Putative Translocase of chloroplast 90, chloroplastic [Source:GMGC_GENE;Acc:GSMUA_Achr1G09910_001]

Coordinates

chr1:-:7573209..7578080

Molecular Weight (calculated)

84588.7 Da

IEP (calculated)

7.643

GRAVY (calculated)

-0.345

Length

758 amino acids

Sequence
(BLAST)

001: MMNFRKWVSC QLISNKLLSA RPFQFSDEDS TSEEHVHPDT ASIGTVSVSD SQSNDTQITE VPTSPHLITA MSSHLGHRKA DPLTKVEELQ IKFLRLIHRI
101: GLTPENLVVS QVLYRLQLAS LIRAGESDVK RPVLKVNTAR GIATELESTG SPNLDLSLRI LVLGKTGVGK SSTINSIFEQ PMVATNAFDP STDRIHEVVG
201: TIKGIQVTVI DTPGLSASYG NASHNRRLML SIKRFIRKSP PDVVLYFERL DAINRGYSDQ PLLKLINDVF GSSIWFNTIL VMTHASSHPP EGSDGYSVAY
301: DAFVHQCTTT VRNYIRQTVS NAQFETPVIL VENHPMCRTN NKGEKVLPNG QVWLSQFLLL CAATKVLADA NVLLKFQESF QLIPKNSRLP SLPHLLSSIL
401: RPRSLPNGKS FGDQDDFKTL SKAQRNAYLD ELDYRETLYL KKQWKEELRR QRERMLHQDD TYVRNDNYEN SDSQEVSEVS DMAIPLSFES DNPAYRYRSL
501: LGNDQWLVRP VLDPQGWDHD VAFDGINLES SLDIRKNFQA SVVGQMRKDK EDFNIQSECT ARYSDPRHHS LLAEVDIQTA AKDLVCTVHG DAKFCNFKCN
601: TTGGGISVTK YGNMYFVGAK LEDSINIGRR AKLTLNAGQI RGCGQVASGG SIEATLRGKD YPIRDDKLTL ATTILSYDKE MVLGGSIQTD FRAGRTVKMS
701: VNANLNSRRL GQISIKTSTS EHVEIALIAI FSLVNALIQR KGTEASIDEK KESTSIDL

Best Arabidopsis Sequence Match ( AT5G20300.2 )
(BLAST)

001: MKGFKDWVFA LSNSMASSRP LLGSDPFFRD PHQEQDNHSQ APAAPQPVTL SEPPCSTSSD LEILPPLSQQ QVPLESLYQS SIDLNGKKHN PLAKIGGLQV
101: QFLRLVQRFG QSQNNILVSK VLYRVHLAML IRAEESELKN VKLRQDRAKA LAREQESSGI PELDFSLRIL VLGKTGVGKS ATINSIFGQP KSETDAFRPG
201: TDRIEEVMGT VSGVKVTFID TPGFHPLSSS STRKNRKILL SIKRYVKKRP PDVVLYLDRL DMIDMRYSDF SLLQLITEIF GAAIWLNTIL VMTHSAATTE
301: GRNGQSVNYE SYVGQRMDVV QHYIHQAVSD TKLENPVLLV ENHPSCKKNL AGEYVLPNGV VWKPQFMFLC VCTKVLGDVQ SLLRFRDSIG LGQPSSTRTA
401: SLPHLLSVFL RRRLSSGADE TEKEIDKLLN LDLEEEDEYD QLPTIRILGK SRFEKLSKSQ KKEYLDELDY RETLYLKKQL KEECRRRRDE KLVEEENLED
501: TEQRDQAAVP LPDMAGPDSF DSDFPAHRYR CVSAGDQWLV RPVYDPQGWD RDVGFDGINI ETAAKINRNL FASATGQVSR DKQRFTIQSE TNAAYTRNFR
601: EQTFSVAVDL QSSGEDLVYS FQGGTKLQTF KHNTTDVGVG LTSFGGKYYV GGKLEDTLLV GKRVKLTANA GQMRGSGQTA NGGSFEACIR GRDYPVRNEQ
701: IGLTMTALSF KRELVLNYGL QTQFRPARGT NIDVNINMNN RKMGKINVKL NSSEHWEIAL ISALTMFKAL VRRSKTEMTE ENEEEKIVNF LVS

Arabidopsis Description

TOC90Translocase of chloroplast 90, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q6S5G3]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.