Factsheet for Zm00001d035254_P001

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

mitochondrion 5
plastid 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, mitochondrion
iPSORT:	mitochondrion
MultiLoc:	mitochondrion
Predotar:	mitochondrion
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

plastid: 22065420
plastid: 23198870

msms PMID: 23198870 doi

M Huang, G Friso, K Nishimura, X Qu, PD Olinares, W Majeran, Q Sun, KJ van Wijk

Department of Plant Biology, Cornell University, Ithaca, New York 14853, United States.

msms PMID: 22065420 doi

W Majeran, G Friso, Y Asakura, X Qu, M Huang, L Ponnala, KP Watkins, A Barkan, KJ van Wijk

Department of Plant Biology, Cornell University, Ithaca, New York 14853, USA.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES15811	Sorghum	mitochondrion	92.22	91.98
TraesCS5D01G120200.1	Wheat	mitochondrion	77.55	77.45
TraesCS5A01G112900.1	Wheat	mitochondrion	77.04	77.04
TraesCS5B01G109100.1	Wheat	mitochondrion	77.17	76.97
HORVU5Hr1G031380.1	Barley	mitochondrion	76.79	76.3
Os12t0197400-01	Rice	mitochondrion	76.53	76.24
GSMUA_Achr1P09910_001	Banana	mitochondrion	50.89	52.64
VIT_11s0118g00260.t01	Wine grape	cytosol, mitochondrion, plastid	51.02	50.13
Solyc07g007650.1.1	Tomato	cytosol	34.57	49.91
KRH20190	Soybean	cytosol	47.07	46.42
KRH03616	Soybean	mitochondrion	47.07	46.36
PGSC0003DMT400078922	Potato	endoplasmic reticulum	48.72	45.64
CDY35813	Canola	cytosol	44.26	44.32
Bra002291.1-P	Field mustard	cytosol	44.13	44.19
CDX92471	Canola	cytosol	44.13	44.19
AT5G20300.4	Thale cress	cytosol	42.98	42.5
Zm00001d029846_P001	Maize	plastid	36.99	29.09
Zm00001d047130_P001	Maize	cytosol	37.24	28.54
Zm00001d010852_P002	Maize	plastid	38.78	25.19
Zm00001d028373_P002	Maize	cytosol	10.2	23.95
Zm00001d012893_P002	Maize	cytosol, plastid	33.67	23.2
Zm00001d035812_P003	Maize	plastid	38.39	23.14
Zm00001d034755_P001	Maize	cytosol	33.42	22.7
Zm00001d047965_P002	Maize	cytosol	10.08	22.32

Protein Annotations

EntrezGene:100281578	MapMan:23.1.2.2	Gene3D:3.40.50.300	UniProt:A0A096RKK3	ProteinID:AQK78572.1	ProteinID:AQK78573.1
GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0005525	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0006810	GO:GO:0008150	GO:GO:0016787	GO:GO:0016817
GO:GO:0019031	GO:GO:0045036	InterPro:G_AIG1	InterPro:IPR006703	InterPro:P-loop_NTPase	PFAM:PF04548
PFAM:PF11886	PFscan:PS51720	PANTHER:PTHR10903	PANTHER:PTHR10903:SF68	SUPFAM:SSF52540	TIGRFAMs:TIGR00993
InterPro:TOC159_MAD	InterPro:Toc86_159	UniParc:UPI00022112C5	EnsemblPlantsGene:Zm00001d035254	EnsemblPlants:Zm00001d035254_P001	EnsemblPlants:Zm00001d035254_T001
SEG:seg	:	:	:	:	:

Description

Chloroplast outer envelope protein 86 isoform 1%3B Chloroplast outer envelope protein 86 isoform 2

Coordinates

chr6:+:17432744..17436513

Molecular Weight (calculated)

86755.7 Da

IEP (calculated)

6.478

GRAVY (calculated)

-0.381

Length

784 amino acids

Sequence
(BLAST)

001: MLMNFRDWIS YRLGSSLLSA RPFALSPGAD DGASEGDAHG TAHNDFVDTV TANTFSSNDM RASEVTANSG SGAIYSGIVQ QDDDNKKSDP LMKVEALQIK
101: FLRLVYRTGV SPSADVVAQV LYRLQLANLI KASESDARRT NLAINKARVI AAQQEAPGGP DLDVSMQILL LGKSGVGKSA TINSIFDERK VATDALVPAT
201: HRIKKIEGTI KGIRVTVIDT PGLVSHYHGQ RRNMKILNSV KHFIKRSPPD IILYFERLDH INSRYSDYPL LKLMTDILGS PMWFNTVLVM THCSSSPPEG
301: PDGYPLEYDT YTRYCKNVVQ RHIQAAVSNT QLDNPFVLID NHPMCRRNTK GERVLPNGQV WVSELLLLCG ATKLLTEANS LLKFQDSFLL SQANTRLPSL
401: PHLLSSLLKP HSSSSSDAID SQLTEMSDEE DEYDQLPPFR ILKKSEYENL TNEQKSAYLD ELDYRETLYL KKQWKEGIRR KKLTEAQSDE VGDDYDESAS
501: PEIVHMSDMD IPLSFDSDYP VHRYRHIITD DQLFRPVLDP QGWDHDIGFD AINFEASQEL KKNVSAAITG QMRKDKEDMY IHSECSVSYN AQRGCSLMGG
601: MDMQTASKDL VCTVHGDAKF HNLPWNSIGG GISVTKFGNK YFAGAKLEDS VTIGRRVKLV ANAGRMSGCG QVAHGGGVEI TARGKDYPVR EGSVTAAVSA
701: LSFEKETVIG ANLQSDFRVG RGSKISVSAN LNSRNLGNLS VRTSTSDHAE IALITVVSLI QFILRRRSAA DNKDEQQIGT NLDD

Best Arabidopsis Sequence Match ( AT5G20300.2 )
(BLAST)

001: MKGFKDWVFA LSNSMASSRP LLGSDPFFRD PHQEQDNHSQ APAAPQPVTL SEPPCSTSSD LEILPPLSQQ QVPLESLYQS SIDLNGKKHN PLAKIGGLQV
101: QFLRLVQRFG QSQNNILVSK VLYRVHLAML IRAEESELKN VKLRQDRAKA LAREQESSGI PELDFSLRIL VLGKTGVGKS ATINSIFGQP KSETDAFRPG
201: TDRIEEVMGT VSGVKVTFID TPGFHPLSSS STRKNRKILL SIKRYVKKRP PDVVLYLDRL DMIDMRYSDF SLLQLITEIF GAAIWLNTIL VMTHSAATTE
301: GRNGQSVNYE SYVGQRMDVV QHYIHQAVSD TKLENPVLLV ENHPSCKKNL AGEYVLPNGV VWKPQFMFLC VCTKVLGDVQ SLLRFRDSIG LGQPSSTRTA
401: SLPHLLSVFL RRRLSSGADE TEKEIDKLLN LDLEEEDEYD QLPTIRILGK SRFEKLSKSQ KKEYLDELDY RETLYLKKQL KEECRRRRDE KLVEEENLED
501: TEQRDQAAVP LPDMAGPDSF DSDFPAHRYR CVSAGDQWLV RPVYDPQGWD RDVGFDGINI ETAAKINRNL FASATGQVSR DKQRFTIQSE TNAAYTRNFR
601: EQTFSVAVDL QSSGEDLVYS FQGGTKLQTF KHNTTDVGVG LTSFGGKYYV GGKLEDTLLV GKRVKLTANA GQMRGSGQTA NGGSFEACIR GRDYPVRNEQ
701: IGLTMTALSF KRELVLNYGL QTQFRPARGT NIDVNINMNN RKMGKINVKL NSSEHWEIAL ISALTMFKAL VRRSKTEMTE ENEEEKIVNF LVS

Arabidopsis Description

TOC90Translocase of chloroplast 90, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q6S5G3]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.