Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- mitochondrion 4
- plastid 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS5D01G120200.1 | Wheat | mitochondrion | 92.78 | 93.25 |
| TraesCS5B01G109100.1 | Wheat | mitochondrion | 92.52 | 92.88 |
| TraesCS5A01G112900.1 | Wheat | mitochondrion | 92.27 | 92.86 |
| Os12t0197400-01 | Rice | mitochondrion | 78.58 | 78.78 |
| Zm00001d035254_P001 | Maize | plastid | 76.3 | 76.79 |
| EES15811 | Sorghum | mitochondrion | 76.05 | 76.34 |
| GSMUA_Achr1P09910_001 | Banana | mitochondrion | 51.58 | 53.69 |
| VIT_11s0118g00260.t01 | Wine grape | cytosol, mitochondrion, plastid | 51.2 | 50.63 |
| Solyc07g007650.1.1 | Tomato | cytosol | 34.6 | 50.28 |
| KRH20190 | Soybean | cytosol | 47.02 | 46.67 |
| KRH03616 | Soybean | mitochondrion | 47.02 | 46.61 |
| PGSC0003DMT400078922 | Potato | endoplasmic reticulum | 48.54 | 45.76 |
| CDY35813 | Canola | cytosol | 43.6 | 43.93 |
| Bra002291.1-P | Field mustard | cytosol | 43.6 | 43.93 |
| CDX92471 | Canola | cytosol | 43.47 | 43.81 |
| AT5G20300.4 | Thale cress | cytosol | 43.35 | 43.13 |
| HORVU1Hr1G053280.1 | Barley | mitochondrion | 35.49 | 40.17 |
| HORVU4Hr1G064110.2 | Barley | cytosol | 10.39 | 23.03 |
| HORVU5Hr1G117690.19 | Barley | plastid | 32.32 | 21.83 |
| HORVU1Hr1G021840.9 | Barley | nucleus | 37.14 | 20.55 |
Protein Annotations
| MapMan:23.1.2.2 | Gene3D:3.40.50.300 | UniProt:A0A287QSQ3 | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0005488 |
| GO:GO:0005525 | GO:GO:0006810 | GO:GO:0008150 | GO:GO:0045036 | InterPro:G_AIG1 | EnsemblPlantsGene:HORVU5Hr1G031380 |
| EnsemblPlants:HORVU5Hr1G031380.1 | InterPro:IPR006703 | InterPro:P-loop_NTPase | PFAM:PF04548 | PFAM:PF11886 | PFscan:PS51720 |
| PANTHER:PTHR10903 | PANTHER:PTHR10903:SF68 | SUPFAM:SSF52540 | InterPro:TOC159_MAD | UniParc:UPI000B46C69F | SEG:seg |
Description
No Description!
Coordinates
chrchr5H:+:197966462..197970247
Molecular Weight (calculated)
87673.1 Da
IEP (calculated)
6.598
GRAVY (calculated)
-0.376
Length
789 amino acids
Sequence
(BLAST)
(BLAST)
001: MMMNFRDWIS YRLGSSLLSA RPLAISGSDA GASQGDGEGT LGTTQSEFVE TVSANIFPSN DSRALEVTSN PQDAVSSGLL QPDHDHNKSD PLKQVEALQI
101: KFLRLVHRTG LPPSTNVVAQ VLYRLQLANL IKAGESDAKR TNLAINKARV IAAEQEAYGG PDLDLPLRIL LLGKTGVGKS ATINSMFDET KVTTNALVPG
201: TSRIRRVDGT IKGIRVTVID TPGLVPHYHS QRRNRKILHA VKHFIKRNPP DIVLYFERLD HINSRYSDYP LLKLITDTLG SSIWFNTVLV MTHCSSSPPE
301: GPDGYPLEYD AYTRYCKNVV ERHIQLAACN TQLENPIVLV DNHPMCRRNT RGERVLPNGQ VWASELLLLC GATKLLAEAN SLLKLQDSFL LSQANARLPS
401: LPHLLSSLLK PAASSSFEGV DNEMTELSDE EDEYDQLPPF RVLKRSEFEN LTKEQKTAYL DELDYRETSY LKQQWKEGIR RQKLAETENS EASSAVADDY
501: EESTSPEVVH ISDMEIPLSF DSNYPAHRYR HLITNDQLFR PILDPQGWDH DIGFDGINFE ACHDLKKNIS TSIAGQMRKD KEDMYMQSEC SVSYSYQRRY
601: SLMGGMDIQT ATKDLVFTVH GDAKFENLPW NTTGGGISVT KFGSKYFSGA KLEDCITIGK RVHLVANAGR MVGGGQVADG GSLEVTVRGK DYPVREGRTS
701: MAATALFFEK ETVIGANLQS IFRVSRGLKL SVSANVNSRN LGRLCVKTST SDHVEIALVA AVSLVQFLLR RRLPPTDKGN QQLDTDLDE
101: KFLRLVHRTG LPPSTNVVAQ VLYRLQLANL IKAGESDAKR TNLAINKARV IAAEQEAYGG PDLDLPLRIL LLGKTGVGKS ATINSMFDET KVTTNALVPG
201: TSRIRRVDGT IKGIRVTVID TPGLVPHYHS QRRNRKILHA VKHFIKRNPP DIVLYFERLD HINSRYSDYP LLKLITDTLG SSIWFNTVLV MTHCSSSPPE
301: GPDGYPLEYD AYTRYCKNVV ERHIQLAACN TQLENPIVLV DNHPMCRRNT RGERVLPNGQ VWASELLLLC GATKLLAEAN SLLKLQDSFL LSQANARLPS
401: LPHLLSSLLK PAASSSFEGV DNEMTELSDE EDEYDQLPPF RVLKRSEFEN LTKEQKTAYL DELDYRETSY LKQQWKEGIR RQKLAETENS EASSAVADDY
501: EESTSPEVVH ISDMEIPLSF DSNYPAHRYR HLITNDQLFR PILDPQGWDH DIGFDGINFE ACHDLKKNIS TSIAGQMRKD KEDMYMQSEC SVSYSYQRRY
601: SLMGGMDIQT ATKDLVFTVH GDAKFENLPW NTTGGGISVT KFGSKYFSGA KLEDCITIGK RVHLVANAGR MVGGGQVADG GSLEVTVRGK DYPVREGRTS
701: MAATALFFEK ETVIGANLQS IFRVSRGLKL SVSANVNSRN LGRLCVKTST SDHVEIALVA AVSLVQFLLR RRLPPTDKGN QQLDTDLDE
001: MKGFKDWVFA LSNSMASSRP LLGSDPFFRD PHQEQDNHSQ APAAPQPVTL SEPPCSTSSD LEILPPLSQQ QVPLESLYQS SIDLNGKKHN PLAKIGGLQV
101: QFLRLVQRFG QSQNNILVSK VLYRVHLAML IRAEESELKN VKLRQDRAKA LAREQESSGI PELDFSLRIL VLGKTGVGKS ATINSIFGQP KSETDAFRPG
201: TDRIEEVMGT VSGVKVTFID TPGFHPLSSS STRKNRKILL SIKRYVKKRP PDVVLYLDRL DMIDMRYSDF SLLQLITEIF GAAIWLNTIL VMTHSAATTE
301: GRNGQSVNYE SYVGQRMDVV QHYIHQAVSD TKLENPVLLV ENHPSCKKNL AGEYVLPNGV VWKPQFMFLC VCTKVLGDVQ SLLRFRDSIG LGQPSSTRTA
401: SLPHLLSVFL RRRLSSGADE TEKEIDKLLN LDLEEEDEYD QLPTIRILGK SRFEKLSKSQ KKEYLDELDY RETLYLKKQL KEECRRRRDE KLVEEENLED
501: TEQRDQAAVP LPDMAGPDSF DSDFPAHRYR CVSAGDQWLV RPVYDPQGWD RDVGFDGINI ETAAKINRNL FASATGQVSR DKQRFTIQSE TNAAYTRNFR
601: EQTFSVAVDL QSSGEDLVYS FQGGTKLQTF KHNTTDVGVG LTSFGGKYYV GGKLEDTLLV GKRVKLTANA GQMRGSGQTA NGGSFEACIR GRDYPVRNEQ
701: IGLTMTALSF KRELVLNYGL QTQFRPARGT NIDVNINMNN RKMGKINVKL NSSEHWEIAL ISALTMFKAL VRRSKTEMTE ENEEEKIVNF LVS
101: QFLRLVQRFG QSQNNILVSK VLYRVHLAML IRAEESELKN VKLRQDRAKA LAREQESSGI PELDFSLRIL VLGKTGVGKS ATINSIFGQP KSETDAFRPG
201: TDRIEEVMGT VSGVKVTFID TPGFHPLSSS STRKNRKILL SIKRYVKKRP PDVVLYLDRL DMIDMRYSDF SLLQLITEIF GAAIWLNTIL VMTHSAATTE
301: GRNGQSVNYE SYVGQRMDVV QHYIHQAVSD TKLENPVLLV ENHPSCKKNL AGEYVLPNGV VWKPQFMFLC VCTKVLGDVQ SLLRFRDSIG LGQPSSTRTA
401: SLPHLLSVFL RRRLSSGADE TEKEIDKLLN LDLEEEDEYD QLPTIRILGK SRFEKLSKSQ KKEYLDELDY RETLYLKKQL KEECRRRRDE KLVEEENLED
501: TEQRDQAAVP LPDMAGPDSF DSDFPAHRYR CVSAGDQWLV RPVYDPQGWD RDVGFDGINI ETAAKINRNL FASATGQVSR DKQRFTIQSE TNAAYTRNFR
601: EQTFSVAVDL QSSGEDLVYS FQGGTKLQTF KHNTTDVGVG LTSFGGKYYV GGKLEDTLLV GKRVKLTANA GQMRGSGQTA NGGSFEACIR GRDYPVRNEQ
701: IGLTMTALSF KRELVLNYGL QTQFRPARGT NIDVNINMNN RKMGKINVKL NSSEHWEIAL ISALTMFKAL VRRSKTEMTE ENEEEKIVNF LVS
Arabidopsis Description
TOC90Translocase of chloroplast 90, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q6S5G3]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.