Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- plastid 2
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX92471 | Canola | cytosol | 98.98 | 98.98 |
| AT5G20300.4 | Thale cress | cytosol | 82.89 | 81.84 |
| VIT_11s0118g00260.t01 | Wine grape | cytosol, mitochondrion, plastid | 54.79 | 53.76 |
| Solyc07g007650.1.1 | Tomato | cytosol | 37.04 | 53.41 |
| KRH20190 | Soybean | cytosol | 51.21 | 50.44 |
| KRH03616 | Soybean | mitochondrion | 51.21 | 50.38 |
| PGSC0003DMT400078922 | Potato | endoplasmic reticulum | 53.64 | 50.18 |
| GSMUA_Achr1P09910_001 | Banana | mitochondrion | 45.47 | 46.97 |
| Os12t0197400-01 | Rice | mitochondrion | 45.08 | 44.85 |
| EES15811 | Sorghum | mitochondrion | 44.57 | 44.4 |
| Zm00001d035254_P001 | Maize | plastid | 44.19 | 44.13 |
| TraesCS5D01G120200.1 | Wheat | mitochondrion | 43.81 | 43.69 |
| TraesCS5A01G112900.1 | Wheat | mitochondrion | 43.68 | 43.62 |
| HORVU5Hr1G031380.1 | Barley | mitochondrion | 43.93 | 43.6 |
| TraesCS5B01G109100.1 | Wheat | mitochondrion | 43.68 | 43.51 |
| Bra006330.1-P | Field mustard | cytosol | 25.54 | 30.17 |
| Bra018546.1-P | Field mustard | mitochondrion | 33.46 | 29.37 |
| Bra022170.1-P | Field mustard | nucleus | 34.61 | 25.49 |
| Bra032612.1-P | Field mustard | cytosol | 9.58 | 25.25 |
| Bra033311.1-P | Field mustard | cytosol | 9.58 | 25.17 |
| Bra036261.1-P | Field mustard | nucleus | 35.5 | 17.89 |
| Bra009405.1-P | Field mustard | cytosol | 12.01 | 12.62 |
| Bra033515.1-P | Field mustard | cytosol | 16.35 | 11.62 |
Protein Annotations
| MapMan:23.1.2.2 | Gene3D:3.40.50.300 | EnsemblPlantsGene:Bra002291 | EnsemblPlants:Bra002291.1 | EnsemblPlants:Bra002291.1-P | ncoils:Coil |
| GO:GO:0000166 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005525 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0006810 | GO:GO:0008150 | GO:GO:0045036 | InterPro:G_AIG1 | InterPro:IPR006703 |
| UniProt:M4CDL0 | InterPro:P-loop_NTPase | PFAM:PF04548 | PFAM:PF11886 | PFscan:PS51720 | PANTHER:PTHR10903 |
| PANTHER:PTHR10903:SF68 | SUPFAM:SSF52540 | InterPro:TOC159_MAD | UniParc:UPI0002544DDC | SEG:seg | : |
Description
AT5G20300 (E=0.0) | chloroplast outer membrane protein, putative
Coordinates
chrA10:+:10459003..10461482
Molecular Weight (calculated)
87720.1 Da
IEP (calculated)
7.013
GRAVY (calculated)
-0.489
Length
783 amino acids
Sequence
(BLAST)
(BLAST)
001: MKGFIDWVFD LSNSMASSSR PLLGTAPFSR HHEPHDSHSQ APALPEPVAR SEPPCSTSVD VEAHPPISQQ QTPLESLHQS SLDLNDKKHN PLAKIGDLQV
101: QFLRLVHRFG QSQNNILVSK VLYRVHLAML IRAEESELKT VKLKQDKAKT LAKEQESSGV PELDFSLRIL VLGKTGVGKS ATINSILGQS KSETDAFQPA
201: TDRIEEVNGT VSGVKVTFID TPGLHQPSPS SARKNRKTLL SIKRYVKKRP PDVVLYLDRL DTIDLRYSDY PLLSLITEVL GAALWLNTIL VMTHSSVASE
301: GRNMNYESYV GQRVDVVQHY IHQAVSDTKL ENPVLLVENH PSCRKNHAGE CVLPNGLVWK PQFMFLCVCT KVLGDVQSLL RFRDSIGLGQ ASGTRTASLP
401: HLLSVFLRRR LSSGGDEAER EIDELMDSEL EEEEEDEYDQ LPAIRILGKA RFEKLSKSQK REYLDELDYR ETLYLKKQLK EECRRRKDEK LNEEEEEKSD
501: QAAVPLPEMA GPDSFDSDFP SHRYRSIATS DQWLVRPVYD PQGWDHDVGF DGINIETAVK VKKNLFASAN GQVSRDKQRF TIHSETNAAY TTDSRIQTFS
601: VAADVQSSGD DLVYTFHGGT KLKTFKQNTT DLGVGLTSFG GKYYLAGKIE DSLLVGKRVK LTVNAGQMKG SGETAHGGSF EACIRGRDYP VRNEQIGVTV
701: TALSFKKELV LNWGLQTQVR PTRDTNVDVS VNMNNRKMGK INVKLNSSEH WEIALISAFT LFKALVRRKK AVSEITNENE EEL
101: QFLRLVHRFG QSQNNILVSK VLYRVHLAML IRAEESELKT VKLKQDKAKT LAKEQESSGV PELDFSLRIL VLGKTGVGKS ATINSILGQS KSETDAFQPA
201: TDRIEEVNGT VSGVKVTFID TPGLHQPSPS SARKNRKTLL SIKRYVKKRP PDVVLYLDRL DTIDLRYSDY PLLSLITEVL GAALWLNTIL VMTHSSVASE
301: GRNMNYESYV GQRVDVVQHY IHQAVSDTKL ENPVLLVENH PSCRKNHAGE CVLPNGLVWK PQFMFLCVCT KVLGDVQSLL RFRDSIGLGQ ASGTRTASLP
401: HLLSVFLRRR LSSGGDEAER EIDELMDSEL EEEEEDEYDQ LPAIRILGKA RFEKLSKSQK REYLDELDYR ETLYLKKQLK EECRRRKDEK LNEEEEEKSD
501: QAAVPLPEMA GPDSFDSDFP SHRYRSIATS DQWLVRPVYD PQGWDHDVGF DGINIETAVK VKKNLFASAN GQVSRDKQRF TIHSETNAAY TTDSRIQTFS
601: VAADVQSSGD DLVYTFHGGT KLKTFKQNTT DLGVGLTSFG GKYYLAGKIE DSLLVGKRVK LTVNAGQMKG SGETAHGGSF EACIRGRDYP VRNEQIGVTV
701: TALSFKKELV LNWGLQTQVR PTRDTNVDVS VNMNNRKMGK INVKLNSSEH WEIALISAFT LFKALVRRKK AVSEITNENE EEL
001: MKGFKDWVFA LSNSMASSRP LLGSDPFFRD PHQEQDNHSQ APAAPQPVTL SEPPCSTSSD LEILPPLSQQ QVPLESLYQS SIDLNGKKHN PLAKIGGLQV
101: QFLRLVQRFG QSQNNILVSK VLYRVHLAML IRAEESELKN VKLRQDRAKA LAREQESSGI PELDFSLRIL VLGKTGVGKS ATINSIFGQP KSETDAFRPG
201: TDRIEEVMGT VSGVKVTFID TPGFHPLSSS STRKNRKILL SIKRYVKKRP PDVVLYLDRL DMIDMRYSDF SLLQLITEIF GAAIWLNTIL VMTHSAATTE
301: GRNGQSVNYE SYVGQRMDVV QHYIHQAVSD TKLENPVLLV ENHPSCKKNL AGEYVLPNGV VWKPQFMFLC VCTKVLGDVQ SLLRFRDSIG LGQPSSTRTA
401: SLPHLLSVFL RRRLSSGADE TEKEIDKLLN LDLEEEDEYD QLPTIRILGK SRFEKLSKSQ KKEYLDELDY RETLYLKKQL KEECRRRRDE KLVEEENLED
501: TEQRDQAAVP LPDMAGPDSF DSDFPAHRYR CVSAGDQWLV RPVYDPQGWD RDVGFDGINI ETAAKINRNL FASATGQVSR DKQRFTIQSE TNAAYTRNFR
601: EQTFSVAVDL QSSGEDLVYS FQGGTKLQTF KHNTTDVGVG LTSFGGKYYV GGKLEDTLLV GKRVKLTANA GQMRGSGQTA NGGSFEACIR GRDYPVRNEQ
701: IGLTMTALSF KRELVLNYGL QTQFRPARGT NIDVNINMNN RKMGKINVKL NSSEHWEIAL ISALTMFKAL VRRSKTEMTE ENEEEKIVNF LVS
101: QFLRLVQRFG QSQNNILVSK VLYRVHLAML IRAEESELKN VKLRQDRAKA LAREQESSGI PELDFSLRIL VLGKTGVGKS ATINSIFGQP KSETDAFRPG
201: TDRIEEVMGT VSGVKVTFID TPGFHPLSSS STRKNRKILL SIKRYVKKRP PDVVLYLDRL DMIDMRYSDF SLLQLITEIF GAAIWLNTIL VMTHSAATTE
301: GRNGQSVNYE SYVGQRMDVV QHYIHQAVSD TKLENPVLLV ENHPSCKKNL AGEYVLPNGV VWKPQFMFLC VCTKVLGDVQ SLLRFRDSIG LGQPSSTRTA
401: SLPHLLSVFL RRRLSSGADE TEKEIDKLLN LDLEEEDEYD QLPTIRILGK SRFEKLSKSQ KKEYLDELDY RETLYLKKQL KEECRRRRDE KLVEEENLED
501: TEQRDQAAVP LPDMAGPDSF DSDFPAHRYR CVSAGDQWLV RPVYDPQGWD RDVGFDGINI ETAAKINRNL FASATGQVSR DKQRFTIQSE TNAAYTRNFR
601: EQTFSVAVDL QSSGEDLVYS FQGGTKLQTF KHNTTDVGVG LTSFGGKYYV GGKLEDTLLV GKRVKLTANA GQMRGSGQTA NGGSFEACIR GRDYPVRNEQ
701: IGLTMTALSF KRELVLNYGL QTQFRPARGT NIDVNINMNN RKMGKINVKL NSSEHWEIAL ISALTMFKAL VRRSKTEMTE ENEEEKIVNF LVS
Arabidopsis Description
TOC90Translocase of chloroplast 90, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q6S5G3]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.