Factsheet for Bra009405.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
plastid 2
mitochondrion 2
cytosol 3

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX70178	Canola	cytosol	99.73	97.89
AT5G05000.3	Thale cress	cytosol	35.7	84.98
PGSC0003DMT400013477	Potato	cytosol	27.79	68.77
VIT_02s0109g00360.t01	Wine grape	cytosol	28.32	68.06
Solyc03g095220.2.1	Tomato	plastid	23.36	67.18
GSMUA_Achr1P22210_001	Banana	cytosol	12.48	66.91
VIT_16s0039g02670.t01	Wine grape	cytosol	26.85	64.94
PGSC0003DMT400030414	Potato	cytosol, plastid	26.04	64.45
Solyc05g052160.2.1	Tomato	plastid	25.91	64.12
KRG94982	Soybean	cytosol	26.71	63.78
KRH64901	Soybean	cytosol	26.44	62.94
GSMUA_AchrUn_...	Banana	cytosol	26.17	62.5
Bra033311.1-P	Field mustard	cytosol	24.03	60.07
Bra032612.1-P	Field mustard	cytosol	23.76	59.6
KXG39799	Sorghum	cytosol	24.97	57.06
TraesCS4D01G230000.1	Wheat	cytosol	24.7	56.44
Os03t0240500-01	Rice	plastid	24.7	56.27
TraesCS4B01G228900.1	Wheat	cytosol	24.56	56.13
TraesCS4A01G072800.1	Wheat	golgi, plastid	24.56	56.13
Zm00001d028373_P002	Maize	cytosol	24.56	54.79
Zm00001d047965_P002	Maize	cytosol	24.83	52.26
HORVU4Hr1G064110.2	Barley	cytosol	24.3	50.84
Bra006330.1-P	Field mustard	cytosol	11.95	13.42
Bra002291.1-P	Field mustard	cytosol	12.62	12.01
Bra018546.1-P	Field mustard	mitochondrion	12.48	10.43
Bra022170.1-P	Field mustard	nucleus	12.89	9.03
Bra033515.1-P	Field mustard	cytosol	11.28	7.62
Bra036261.1-P	Field mustard	nucleus	13.15	6.31

Protein Annotations

Gene3D:2.60.120.260	MapMan:20.4.2.1.1	MapMan:23.1.2.3	Gene3D:3.40.50.300	EnsemblPlantsGene:Bra009405	EnsemblPlants:Bra009405.1
EnsemblPlants:Bra009405.1-P	ncoils:Coil	GO:GO:0000166	GO:GO:0003674	GO:GO:0005215	GO:GO:0005488
GO:GO:0005525	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0006810
GO:GO:0006886	GO:GO:0008150	GO:GO:0009536	GO:GO:0009707	GO:GO:0015450	GO:GO:0016020
GO:GO:0071806	InterPro:G_AIG1	InterPro:Galactose-bd-like_sf	InterPro:IPR006703	InterPro:IPR008979	InterPro:IPR012919
UniProt:M4CYV8	InterPro:P-loop_NTPase	PFAM:PF04548	PFAM:PF07738	PFscan:PS51469	PFscan:PS51720
PANTHER:PTHR12911	PANTHER:PTHR12911:SF38	SUPFAM:SSF52540	InterPro:SUN_dom	TIGRFAMs:TIGR00991	InterPro:Toc34
UniParc:UPI0002547776	SEG:seg	:	:	:	:

Description

AT5G04990 (E=8e-193) | sad1/unc-84 protein-related

Coordinates

chrA10:+:16500015..16503493

Molecular Weight (calculated)

81983.6 Da

IEP (calculated)

8.731

GRAVY (calculated)

-0.345

Length

745 amino acids

Sequence
(BLAST)

001: MAALQMSREW IGIQQFPPAT QSKLLEILNK FKEEDVSSLT VLVMGKGGVG KSSTVNSVIG EKAAAVSTFQ SEGLRPSLVS RSRSGFTLNI IDTPGLIEGG
101: YVNDQAVNLI KRFLLNMTID VLLYVDRLDV YRVDDLDKQV VTAITDAFGK EIWKKSALVL SHAQFSPPDG LNYDLFVSRR SDALLKLIRA SAQLKKQDIQ
201: DSSIPVILVE NSGRCHKNES DEKTITEISF NGNKSIHVDK KLVEGPNPNA RGKRLIPLIF AFQYLLVMKP LVRAIKSDVS RESKPAWEMR ESDQMSASTM
301: SLTATPSKRT PIVAGDKKPN FDFPPSESLA NGEAKDPILP EAVTDRSKGQ DLGPVTRRVS STANTTSATQ RRTRKVSAPK TEKARWKRVA RIFAKQLVAL
401: LIIVGLIQAA RKVLSPSSSS SPTSSFETEM AFSGLESRIA EVDGLVKATT STMQVQVELL DKKIEKEAKA LRQELEAKAS AFRNEVKKIE SKTESLEKSV
501: EEVKAKPFVS RDEFERVYEE LKKGNVDDSA FSEVSIDELR AYARDVMERE IERHAADGLG RVDYALASGG GFVMGHSDPF LVGKGSSWFA TTGRKAHTNA
601: VKMLSPSFGE PGQCFALKGS SGYVQIRLRG PIVPDAFTLE HVAKSVAYDR SSAPKDCVVS GWLQGNGQES SEESEKMQLL TEFTYDLERS NAQTFNVLDS
701: SDSGLVDTVR LDFTSNHGSN SHTCIYRFRV HGRAPDPVPV VETEL

Best Arabidopsis Sequence Match ( AT5G04990.1 )
(BLAST)

001: MSASTVSITA NTAAATRRTP ILAGEKKSNF DYPQSESLAN GGVGEAGGTS RDLSRGEATL DRSQGQDLGP VTRRSVSAAT GTNTTATQRR TRKVATPKSE
101: KARWKTVVRI FAKQLGALLI IVGLIQLTRK MILKASSPSS PISSYETEMA FSGLESRIAE VDGLVKATTN SMQVQVELLD KKMEREAKVL RQEIERKASA
201: FQSELKKIES RTESLEKSVD EVNAKPWVTK DELERIYEEL KKGNVDDSAF SEISIDELRA YARDIMEKEI EKHAADGLGR VDYALASGGA FVMEHSDPYL
301: VGKGSSWFAT TMRRAHTNAV KMLSPSFGEP GQCFPLKGSE GYVQIRLRGP IIPEAFTLEH VAKSVAYDRS SAPKDCRVSG SLQGPESSAE TENMQLLTEF
401: TYDLDRSNAQ TFNILESSSS GLIDTVRLDF TSNHGSDSHT CIYRFRVHGR APDPVPVVGT NLDQDSSPES E

Arabidopsis Description

SUN1SUN domain-containing protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9FF75]
SUBAcon: [plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.