CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
mitochondrion 2
cytosol 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
BaCelLo:	nucleus
iPSORT:	mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra009405.1-P	Field mustard	cytosol	97.89	99.73
CDX98810	Canola	cytosol	40.32	97.76
CDX98809	Canola	cytosol	56.92	96.0
CDY52130	Canola	cytosol, plastid	38.21	92.65
CDX80936	Canola	cytosol	37.94	92.01
AT5G05000.3	Thale cress	cytosol	36.23	87.86
VIT_02s0109g00360.t01	Wine grape	cytosol	29.12	71.29
PGSC0003DMT400013477	Potato	cytosol	28.2	71.1
Solyc03g095220.2.1	Tomato	plastid	23.98	70.27
VIT_16s0039g02670.t01	Wine grape	cytosol	27.8	68.51
PGSC0003DMT400030414	Potato	cytosol, plastid	26.88	67.77
GSMUA_Achr1P22210_001	Banana	cytosol	12.25	66.91
Solyc05g052160.2.1	Tomato	plastid	26.35	66.45
KRG94982	Soybean	cytosol	27.14	66.03
GSMUA_AchrUn_...	Banana	cytosol	27.01	65.71
KRH64901	Soybean	cytosol	26.88	65.18
CDY55323	Canola	cytosol	24.9	63.64
CDX89987	Canola	cytosol	24.9	63.42
CDY32453	Canola	cytosol	24.64	62.96
CDY15228	Canola	cytosol	24.64	62.75
KXG39799	Sorghum	cytosol	25.82	60.12
TraesCS4D01G230000.1	Wheat	cytosol	25.69	59.82
TraesCS4A01G072800.1	Wheat	golgi, plastid	25.56	59.51
TraesCS4B01G228900.1	Wheat	cytosol	25.56	59.51
Os03t0240500-01	Rice	plastid	25.56	59.33
Zm00001d028373_P002	Maize	cytosol	25.43	57.78
Zm00001d047965_P002	Maize	cytosol	25.56	54.8
HORVU4Hr1G064110.2	Barley	cytosol	25.3	53.93
CDX97269	Canola	cytosol	3.16	36.36
CDX70657	Canola	cytosol	8.43	22.07
CDX70551	Canola	cytosol	8.3	17.5
CDY50376	Canola	cytosol	12.78	13.92
CDX78660	Canola	cytosol	12.12	13.88
CDX92471	Canola	cytosol	13.04	12.64
CDX91288	Canola	cytosol	12.78	12.34
CDY35813	Canola	cytosol	12.65	12.26
CDX70641	Canola	cytosol	12.78	12.09
CDX70659	Canola	cytosol	1.58	11.11
CDY66172	Canola	cytosol	14.23	10.95
CDY43117	Canola	cytosol	14.76	10.14
CDX97270	Canola	cytosol	5.53	9.57
CDX92086	Canola	cytosol, endoplasmic reticulum, vacuole	13.31	9.5
CDX70658	Canola	cytosol	1.58	9.38
CDX92087	Canola	cytosol	14.23	9.14
CDX70550	Canola	cytosol	3.29	8.83
CDY44175	Canola	cytosol	7.77	6.39
CDY22896	Canola	cytosol	8.04	6.02

Protein Annotations

Gene3D:2.60.120.260	MapMan:20.4.2.1.1	MapMan:23.1.2.3	Gene3D:3.40.50.300	GO:A0A078C5C1	EnsemblPlants:CDX70178
ProteinID:CDX70178	ProteinID:CDX70178.1	ncoils:Coil	GO:GO:0000166	GO:GO:0003674	GO:GO:0005215
GO:GO:0005488	GO:GO:0005525	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0006810	GO:GO:0006886	GO:GO:0008150	GO:GO:0009536	GO:GO:0009707	GO:GO:0015450
GO:GO:0016020	EnsemblPlantsGene:GSBRNA2T00136298001	InterPro:G_AIG1	InterPro:Galactose-bd-like_sf	InterPro:IPR006703	InterPro:IPR008979
InterPro:IPR012919	InterPro:P-loop_NTPase	PFAM:PF04548	PFAM:PF07738	PFscan:PS51469	PFscan:PS51720
PANTHER:PTHR12911	PANTHER:PTHR12911:SF38	SUPFAM:SSF52540	InterPro:SUN_dom	TIGRFAMs:TIGR00991	InterPro:Toc34
UniParc:UPI0004EE1215	SEG:seg	:	:	:	:

Description

BnaA10g25270D

Coordinates

chrLK031790:+:3428598..3432671

Molecular Weight (calculated)

83586.6 Da

IEP (calculated)

8.721

GRAVY (calculated)

-0.343

Length

759 amino acids

Sequence
(BLAST)

001: MAALQMSREW IGIQQFPPAT QSKLIEILNK FKEEDVSSLT VLVMGKGGVG KSSTVNSVIG EKAAAVSTFQ SEGLRPSLVS RSRSGFTLNI IDTPGLIEGG
101: YVNDQAVNLI KRFLLNMTID VLLYVDRLDV YRVDDLDKQV VTAITDAFGK EIWKKSALVL SHAQFSPPDG LNYDLFVSRR SDALLKLIRA SAQLKKQDMQ
201: DSSIPVILVE NSGRCHKNES DEKILPDGSS WIPNLYKTIT EISFNGNKSI HVDKKLVEGP NPNARGKRLI PLIFAFQYLL VMKPLVRAIK SDVSRESKPA
301: WEMRESDQMS ASTMSLTATP SKRTPIVAGD KKPNFDFPPS ESLANGEAKD PILPEAVTDR SKGQDLGPVT RRVSSTANTT SATQRRTRKV SAPKTEKARW
401: KRVARIFAKQ LVALLIIVGL IQAARKVLSP SSSSSPTSSF ETEMAFSGLE SRIAEVDGLV KATTSTMQVQ VELLDKKIEK EAKALRQELE AKASAFRNEV
501: KKIESKTESL EKSVEEVKAK PFVSRDEFER VYEELKKGNV DDSAFSEVSI DELRAYARDV MEREIERHAA DGLGRVDYAL ASGGGFVMGH SDPFLVGKGS
601: SWFATTGRKA HTNAVKMLSP SFGEPGQCFA LKGSSGYVQI RLRGPIVPDA FTLEHVAKSV AYDRSSAPKD CVVSGWLQGN GQESSEESEK MQLLTEFTYD
701: LERSNAQTFN VLDSSDSGLV DTVRLDFTSN HGSNSHTCIY RFRVHGRAPD PVPVVETEL

Best Arabidopsis Sequence Match ( AT5G04990.1 )
(BLAST)

001: MSASTVSITA NTAAATRRTP ILAGEKKSNF DYPQSESLAN GGVGEAGGTS RDLSRGEATL DRSQGQDLGP VTRRSVSAAT GTNTTATQRR TRKVATPKSE
101: KARWKTVVRI FAKQLGALLI IVGLIQLTRK MILKASSPSS PISSYETEMA FSGLESRIAE VDGLVKATTN SMQVQVELLD KKMEREAKVL RQEIERKASA
201: FQSELKKIES RTESLEKSVD EVNAKPWVTK DELERIYEEL KKGNVDDSAF SEISIDELRA YARDIMEKEI EKHAADGLGR VDYALASGGA FVMEHSDPYL
301: VGKGSSWFAT TMRRAHTNAV KMLSPSFGEP GQCFPLKGSE GYVQIRLRGP IIPEAFTLEH VAKSVAYDRS SAPKDCRVSG SLQGPESSAE TENMQLLTEF
401: TYDLDRSNAQ TFNILESSSS GLIDTVRLDF TSNHGSDSHT CIYRFRVHGR APDPVPVVGT NLDQDSSPES E

Arabidopsis Description

SUN1SUN domain-containing protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9FF75]
SUBAcon: [plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.