Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 4
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY52130 | Canola | cytosol, plastid | 89.14 | 89.14 |
| CDX80936 | Canola | cytosol | 87.86 | 87.86 |
| VIT_02s0109g00360.t01 | Wine grape | cytosol | 70.61 | 71.29 |
| PGSC0003DMT400013477 | Potato | cytosol | 67.41 | 70.1 |
| GSMUA_Achr1P22210_001 | Banana | cytosol | 30.99 | 69.78 |
| VIT_16s0039g02670.t01 | Wine grape | cytosol | 67.73 | 68.83 |
| Solyc03g095220.2.1 | Tomato | plastid | 56.55 | 68.34 |
| GSMUA_AchrUn_... | Banana | cytosol | 68.05 | 68.27 |
| KRG94982 | Soybean | cytosol | 66.45 | 66.67 |
| PGSC0003DMT400030414 | Potato | cytosol, plastid | 63.58 | 66.11 |
| KRH64901 | Soybean | cytosol | 65.81 | 65.81 |
| Solyc05g052160.2.1 | Tomato | plastid | 62.62 | 65.12 |
| AT1G02280.1 | Thale cress | cytosol | 58.79 | 61.95 |
| KXG39799 | Sorghum | cytosol | 62.62 | 60.12 |
| TraesCS4A01G072800.1 | Wheat | golgi, plastid | 61.98 | 59.51 |
| TraesCS4B01G228900.1 | Wheat | cytosol | 61.98 | 59.51 |
| Os03t0240500-01 | Rice | plastid | 61.98 | 59.33 |
| TraesCS4D01G230000.1 | Wheat | cytosol | 61.66 | 59.2 |
| Zm00001d028373_P002 | Maize | cytosol | 61.98 | 58.08 |
| Zm00001d047965_P002 | Maize | cytosol | 62.3 | 55.08 |
| HORVU4Hr1G064110.2 | Barley | cytosol | 61.34 | 53.93 |
| CDX70178 | Canola | cytosol | 87.86 | 36.23 |
| Bra009405.1-P | Field mustard | cytosol | 84.98 | 35.7 |
| AT5G20300.4 | Thale cress | cytosol | 26.2 | 10.34 |
| AT3G16620.1 | Thale cress | cytosol | 28.11 | 8.08 |
| AT2G16640.3 | Thale cress | cytosol | 28.75 | 7.46 |
| AT4G02510.4 | Thale cress | nucleus | 28.11 | 5.85 |
| AT4G15810.1 | Thale cress | cytosol | 15.97 | 5.45 |
Protein Annotations
| MapMan:23.1.2.3 | Gene3D:3.40.50.300 | EntrezGene:830382 | UniProt:A0A178UIF8 | ProteinID:AED90814.1 | ProteinID:AED90815.1 |
| ProteinID:AED90816.1 | EMBL:AJ132696 | EMBL:AK229425 | ArrayExpress:AT5G05000 | EnsemblPlantsGene:AT5G05000 | RefSeq:AT5G05000 |
| TAIR:AT5G05000 | RefSeq:AT5G05000-TAIR-G | EnsemblPlants:AT5G05000.3 | TAIR:AT5G05000.3 | EMBL:AY088447 | UniProt:B5RID3 |
| ProteinID:BAB11522.1 | EMBL:BT044057 | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0003924 |
| GO:GO:0005215 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005525 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005737 | GO:GO:0006810 | GO:GO:0006886 | GO:GO:0008150 | GO:GO:0009507 |
| GO:GO:0009527 | GO:GO:0009536 | GO:GO:0009707 | GO:GO:0009941 | GO:GO:0015031 | GO:GO:0015450 |
| GO:GO:0016020 | GO:GO:0016021 | GO:GO:0016787 | GO:GO:0019750 | GO:GO:0042802 | GO:GO:0045036 |
| GO:GO:0046872 | GO:GO:0071806 | InterPro:G_AIG1 | InterPro:IPR006703 | RefSeq:NP_196119.1 | RefSeq:NP_850768.1 |
| RefSeq:NP_974732.1 | ProteinID:OAO92977.1 | InterPro:P-loop_NTPase | PFAM:PF04548 | PIRSF:PIRSF038134 | PO:PO:0000013 |
| PO:PO:0000037 | PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 |
| PO:PO:0001185 | PO:PO:0004507 | PO:PO:0005052 | PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 |
| PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 |
| PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 |
| PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 |
| PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025281 |
| PFscan:PS51720 | PANTHER:PTHR10903 | PANTHER:PTHR10903:SF43 | UniProt:Q38906 | SUPFAM:SSF52540 | TIGRFAMs:TIGR00991 |
| Symbol:TOC34 | InterPro:Toc34 | EMBL:U43377 | UniParc:UPI0000162461 | SEG:seg | : |
Description
TOC34Translocase of chloroplast 34, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q38906]
Coordinates
chr5:-:1474029..1476281
Molecular Weight (calculated)
34709.2 Da
IEP (calculated)
9.998
GRAVY (calculated)
-0.151
Length
313 amino acids
Sequence
(BLAST)
(BLAST)
001: MAALQTLREW IGIQQFPPAT QSKLLEILGK YKEEDVSSLT VLVMGKGGVG KSSTVNSVIG EKAAAVSTFQ SEGLRPTLVS RTRSGFTLNI IDTPGLIEGG
101: YVNDQAINII KRFLLNMTID VLLYVDRLDV YRVDDLDRQV VGAITDAFGK EIWKKSALVL THAQFSPPDG LNYNHFVSKR SNALLKVIQT GAQLKKQDLQ
201: GFSIPVILVE NSGRCHKNES DEKILPCGTS WIPNLFNKIT EISFNGNKAI HVDKKLVEGP NPNERGKKLI PLMFAFQYLL VMKPLVRAIK SDVSRESKPA
301: WELRDSGLAS RRS
101: YVNDQAINII KRFLLNMTID VLLYVDRLDV YRVDDLDRQV VGAITDAFGK EIWKKSALVL THAQFSPPDG LNYNHFVSKR SNALLKVIQT GAQLKKQDLQ
201: GFSIPVILVE NSGRCHKNES DEKILPCGTS WIPNLFNKIT EISFNGNKAI HVDKKLVEGP NPNERGKKLI PLMFAFQYLL VMKPLVRAIK SDVSRESKPA
301: WELRDSGLAS RRS
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.