Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY66172 | Canola | cytosol | 74.38 | 82.15 |
| CDY43117 | Canola | cytosol | 75.57 | 74.55 |
| CDX92086 | Canola | cytosol, endoplasmic reticulum, vacuole | 72.18 | 73.94 |
| Bra022170.1-P | Field mustard | nucleus | 72.18 | 73.94 |
| CDX92087 | Canola | cytosol | 77.23 | 71.15 |
| AT2G16640.3 | Thale cress | cytosol | 78.05 | 70.48 |
| HORVU1Hr1G053280.1 | Barley | mitochondrion | 42.15 | 65.85 |
| PGSC0003DMT400024781 | Potato | cytosol | 56.84 | 58.45 |
| Solyc11g043010.1.1 | Tomato | nucleus | 36.27 | 54.26 |
| KRH24252 | Soybean | mitochondrion | 59.32 | 53.34 |
| EER91974 | Sorghum | cytosol | 47.66 | 52.48 |
| Os10t0548800-01 | Rice | cytosol, plasma membrane, plastid | 47.93 | 51.79 |
| VIT_03s0038g02070.t01 | Wine grape | nucleus | 60.24 | 51.45 |
| Zm00001d029846_P001 | Maize | plastid | 46.74 | 51.05 |
| Zm00001d047130_P001 | Maize | cytosol | 47.11 | 50.15 |
| TraesCS1B01G222000.1 | Wheat | cytosol | 47.47 | 48.14 |
| TraesCS1A01G208000.1 | Wheat | cytosol | 46.65 | 47.57 |
| TraesCS1D01G211300.1 | Wheat | cytosol, golgi | 46.65 | 47.3 |
| KRH29257 | Soybean | endoplasmic reticulum | 59.14 | 47.11 |
| PGSC0003DMT400004034 | Potato | cytosol | 59.05 | 47.0 |
| Solyc01g111240.2.1 | Tomato | nucleus | 57.67 | 46.83 |
| GSMUA_Achr8P19440_001 | Banana | cytosol | 45.18 | 40.97 |
| GSMUA_Achr11P... | Banana | cytosol | 47.02 | 36.31 |
| AT5G20300.4 | Thale cress | cytosol | 25.62 | 35.18 |
| AT5G05000.3 | Thale cress | cytosol | 8.08 | 28.11 |
| AT1G02280.1 | Thale cress | cytosol | 7.62 | 27.95 |
| AT4G02510.4 | Thale cress | nucleus | 37.92 | 27.48 |
| AT4G15810.1 | Thale cress | cytosol | 12.49 | 14.81 |
Protein Annotations
| MapMan:23.1.2.2 | Gene3D:3.40.50.300 | EntrezGene:820913 | ProteinID:AEE75844.1 | EMBL:AK229133 | ArrayExpress:AT3G16620 |
| EnsemblPlantsGene:AT3G16620 | RefSeq:AT3G16620 | TAIR:AT3G16620 | RefSeq:AT3G16620-TAIR-G | EnsemblPlants:AT3G16620.1 | TAIR:AT3G16620.1 |
| Symbol:ATTOC120 | EMBL:AY587019 | Unigene:At.38870 | ProteinID:BAB02753.1 | GO:GO:0000166 | GO:GO:0003674 |
| GO:GO:0003824 | GO:GO:0005488 | GO:GO:0005525 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005737 | GO:GO:0006810 | GO:GO:0008150 | GO:GO:0009507 | GO:GO:0009527 | GO:GO:0009536 |
| GO:GO:0009707 | GO:GO:0015031 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0016787 | GO:GO:0016817 |
| GO:GO:0045036 | GO:GO:0046872 | InterPro:G_AIG1 | InterPro:IPR006703 | RefSeq:NP_188284.1 | InterPro:P-loop_NTPase |
| PFAM:PF04548 | PFAM:PF11886 | PO:PO:0000005 | PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000230 |
| PO:PO:0000293 | PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 |
| PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 |
| PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 |
| PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 |
| PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 |
| PO:PO:0025022 | PO:PO:0025195 | PO:PO:0025281 | PFscan:PS51720 | PANTHER:PTHR10903 | PANTHER:PTHR10903:SF47 |
| UniProt:Q9LUS2 | SUPFAM:SSF52540 | TIGRFAMs:TIGR00993 | InterPro:TOC159_MAD | InterPro:Toc86_159 | UniParc:UPI000009EEBC |
| SEG:seg | : | : | : | : | : |
Description
TOC120Translocase of chloroplast 120, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9LUS2]
Coordinates
chr3:-:5658317..5662066
Molecular Weight (calculated)
119924.0 Da
IEP (calculated)
4.733
GRAVY (calculated)
-0.584
Length
1089 amino acids
Sequence
(BLAST)
(BLAST)
0001: MGDGAEIVTR LYGDEKKLAE DGRISELVGS DEVKDNEEEV FEEAIGSQEG LKPESLKTDV LQEDFPLASN DEVCDLEETS RNERGVENLK VNYSEIGESH
0101: GEVNEQCITT KEADSDLVTL KMNDYDHGEV ADADISYGKM ASSLDVVENS EKATSNLATE DVNLENGNTH SSSENGVVSP DENKELVAEV ISVSACSVET
0201: GSNGIDDEKW EEEIDVSAGM VTEQRNGKTG AEFNSVKIVS GDKSLNDSIE VAAGTLSPLE KSSSEEKGET ESQNSNGGHD IQSNKEIVKQ QDSSVNIGPE
0301: IKESQHMERE SEVLSSVSPT ESRSDTAALP PARPAGLGRA APLLEPAPRV TQQPRVNGNV SHNQPQQAED STTAETDEHD ETREKLQFIR VKFLRLSHRL
0401: GQTPHNVVVA QVLYRLGLAE QLRGRNGSRV GAFSFDRASA MAEQLEAAAQ DPLDFSCTIM VLGKSGVGKS ATINSIFDEL KISTDAFQVG TKKVQDIEGF
0501: VQGIKVRVID TPGLLPSWSD QHKNEKILKS VRAFIKKSPP DIVLYLDRLD MQSRDSGDMP LLRTITDVFG PSIWFNAIVG LTHAASAPPD GPNGTASSYD
0601: MFVTQRSHVI QQAIRQAAGD MRLMNPVSLV ENHSACRTNR AGQRVLPNGQ VWKPHLLLLS FASKILAEAN ALLKLQDNIP GGQFATRSKA PPLPLLLSSL
0701: LQSRPQAKLP EQQYDDEDDE DDLDESSDSE EESEYDELPP FKRLTKAEMT KLSKSQKKEY LDEMEYREKL FMKRQMKEER KRRKLLKKFA AEIKDMPNGY
0801: SENVEEERSE PASVPVPMPD LSLPASFDSD NPTHRYRYLD TSNQWLVRPV LETHGWDHDI GYEGVNAERL FVVKDKIPVS FSGQVTKDKK DAHVQLELAS
0901: SVKHGEGRST SLGFDMQNAG KELAYTIRSE TRFNKFRKNK AAAGLSVTLL GDSVSAGLKV EDKLIANKRF RMVMSGGAMT SRGDVAYGGT LEAQFRDKDY
1001: PLGRFLSTLG LSVMDWHGDL AIGGNIQSQV PIGRSSNLIA RANLNNRGAG QVSIRVNSSE QLQLAVVALV PLFKKLLTYY SPEQMQYGH
0101: GEVNEQCITT KEADSDLVTL KMNDYDHGEV ADADISYGKM ASSLDVVENS EKATSNLATE DVNLENGNTH SSSENGVVSP DENKELVAEV ISVSACSVET
0201: GSNGIDDEKW EEEIDVSAGM VTEQRNGKTG AEFNSVKIVS GDKSLNDSIE VAAGTLSPLE KSSSEEKGET ESQNSNGGHD IQSNKEIVKQ QDSSVNIGPE
0301: IKESQHMERE SEVLSSVSPT ESRSDTAALP PARPAGLGRA APLLEPAPRV TQQPRVNGNV SHNQPQQAED STTAETDEHD ETREKLQFIR VKFLRLSHRL
0401: GQTPHNVVVA QVLYRLGLAE QLRGRNGSRV GAFSFDRASA MAEQLEAAAQ DPLDFSCTIM VLGKSGVGKS ATINSIFDEL KISTDAFQVG TKKVQDIEGF
0501: VQGIKVRVID TPGLLPSWSD QHKNEKILKS VRAFIKKSPP DIVLYLDRLD MQSRDSGDMP LLRTITDVFG PSIWFNAIVG LTHAASAPPD GPNGTASSYD
0601: MFVTQRSHVI QQAIRQAAGD MRLMNPVSLV ENHSACRTNR AGQRVLPNGQ VWKPHLLLLS FASKILAEAN ALLKLQDNIP GGQFATRSKA PPLPLLLSSL
0701: LQSRPQAKLP EQQYDDEDDE DDLDESSDSE EESEYDELPP FKRLTKAEMT KLSKSQKKEY LDEMEYREKL FMKRQMKEER KRRKLLKKFA AEIKDMPNGY
0801: SENVEEERSE PASVPVPMPD LSLPASFDSD NPTHRYRYLD TSNQWLVRPV LETHGWDHDI GYEGVNAERL FVVKDKIPVS FSGQVTKDKK DAHVQLELAS
0901: SVKHGEGRST SLGFDMQNAG KELAYTIRSE TRFNKFRKNK AAAGLSVTLL GDSVSAGLKV EDKLIANKRF RMVMSGGAMT SRGDVAYGGT LEAQFRDKDY
1001: PLGRFLSTLG LSVMDWHGDL AIGGNIQSQV PIGRSSNLIA RANLNNRGAG QVSIRVNSSE QLQLAVVALV PLFKKLLTYY SPEQMQYGH
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.