Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
mitochondrion:
28499913
|
msms PMID:
28499913
doi
Department of Life Science and Informatics, Maebashi Institute of Technology, Maebashi 371-0816, Japan. Electronic address: ksakata@maebashi-it.ac.jp., Institute of Crop Science, National Agriculture and Food Research Organization, Tsukuba 305-8518, Japan., Institute of Crop Science, National Agriculture and Food Research Organization, Tsukuba 305-8518, Japan; Faculty of Life and Environmental Sciences, University of Tsukuba, Tsukuba 305-8572, Japan., Institute of Crop Science, National Agriculture and Food Research Organization, Tsukuba 305-8518, Japan; Faculty of Life and Environmental Sciences, University of Tsukuba, Tsukuba 305-8572, Japan. Electronic address: komatsu.setsuko.fu@u.tsukuba.ac.jp., King Abdullah University of Science and Technology (KAUST), Computational Bioscience Research Center (CBRC), Thuwal 23955-6900, Saudi Arabia.
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH29257 | Soybean | endoplasmic reticulum | 94.05 | 83.32 |
| HORVU1Hr1G053280.1 | Barley | mitochondrion | 38.98 | 67.72 |
| CDX70657 | Canola | cytosol | 15.69 | 65.52 |
| CDY66172 | Canola | cytosol | 52.02 | 63.89 |
| PGSC0003DMT400024781 | Potato | cytosol | 53.51 | 61.19 |
| CDX70659 | Canola | cytosol | 5.37 | 60.19 |
| AT3G16620.1 | Thale cress | cytosol | 53.34 | 59.32 |
| VIT_03s0038g02070.t01 | Wine grape | nucleus | 61.44 | 58.35 |
| CDX70551 | Canola | cytosol | 17.34 | 58.33 |
| CDY43117 | Canola | cytosol | 52.85 | 57.97 |
| Solyc11g043010.1.1 | Tomato | nucleus | 34.43 | 57.28 |
| AT2G16640.3 | Thale cress | cytosol | 56.4 | 56.63 |
| CDX92086 | Canola | cytosol, endoplasmic reticulum, vacuole | 49.71 | 56.63 |
| Bra022170.1-P | Field mustard | nucleus | 49.71 | 56.63 |
| CDX78660 | Canola | cytosol | 30.72 | 56.11 |
| Bra006330.1-P | Field mustard | cytosol | 30.72 | 56.11 |
| EER91974 | Sorghum | cytosol | 45.25 | 55.41 |
| Os10t0548800-01 | Rice | cytosol, plasma membrane, plastid | 45.33 | 54.46 |
| Zm00001d029846_P001 | Maize | plastid | 44.59 | 54.16 |
| CDX92087 | Canola | cytosol | 52.6 | 53.89 |
| Zm00001d047130_P001 | Maize | cytosol | 45.25 | 53.57 |
| KRH30746 | Soybean | cytosol | 5.53 | 51.15 |
| CDX70550 | Canola | cytosol | 11.89 | 50.88 |
| CDX70641 | Canola | cytosol | 33.69 | 50.87 |
| Solyc01g111240.2.1 | Tomato | nucleus | 56.15 | 50.71 |
| PGSC0003DMT400004034 | Potato | cytosol | 57.23 | 50.66 |
| TraesCS1B01G222000.1 | Wheat | cytosol | 44.51 | 50.19 |
| TraesCS1A01G208000.1 | Wheat | cytosol | 44.1 | 50.0 |
| TraesCS1D01G211300.1 | Wheat | cytosol, golgi | 44.18 | 49.81 |
| CDX70658 | Canola | cytosol | 4.62 | 43.75 |
| GSMUA_Achr8P19440_001 | Banana | cytosol | 42.28 | 42.63 |
| GSMUA_Achr11P... | Banana | cytosol | 44.67 | 38.37 |
| KRH03616 | Soybean | mitochondrion | 25.1 | 38.19 |
| KRH20190 | Soybean | cytosol | 24.61 | 37.48 |
| KRH43000 | Soybean | nucleus | 33.03 | 33.76 |
| KRH59116 | Soybean | nucleus | 33.77 | 32.98 |
| KRG94982 | Soybean | cytosol | 8.09 | 31.41 |
| KRH64901 | Soybean | cytosol | 7.76 | 30.03 |
| KRH02257 | Soybean | cytosol | 15.44 | 21.74 |
Protein Annotations
| EntrezGene:100810931 | MapMan:23.1.2.2 | Gene3D:3.40.50.300 | EMBL:ACUP02007173 | ncoils:Coil | EnsemblPlantsGene:GLYMA_12G030400 |
| GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005488 | GO:GO:0005525 | GO:GO:0016787 |
| GO:GO:0016817 | InterPro:G_AIG1 | InterPro:IPR006703 | UniProt:K7LST1 | EnsemblPlants:KRH24252 | ProteinID:KRH24252 |
| ProteinID:KRH24252.1 | InterPro:P-loop_NTPase | PFAM:PF04548 | PFAM:PF11886 | PFscan:PS51720 | PANTHER:PTHR10903 |
| PANTHER:PTHR10903:SF47 | SUPFAM:SSF52540 | TIGRFAMs:TIGR00993 | InterPro:TOC159_MAD | InterPro:Toc86_159 | UniParc:UPI000295579C |
| SEG:seg | : | : | : | : | : |
Description
hypothetical protein
Coordinates
chr12:-:2266397..2270870
Molecular Weight (calculated)
131713.0 Da
IEP (calculated)
4.437
GRAVY (calculated)
-0.600
Length
1211 amino acids
Sequence
(BLAST)
(BLAST)
0001: MDYEADKFGA NGEGESKRVG EVVSEESVAG SDQTKGLEAE YVFQEAMEPR EQVHDQGSKL NSEDAVVDEQ DDTETGSALT SALADGNTPD AVQEPDSFEQ
0101: AVGADTDSGK LGEDEVIAKQ DLEERDGQGN DYVPLDGVDS GVPGDGEICD ESCGVGDDNL ESSDGGDGKE ESGLNSDREM LVLENGSMVD GNSGLVSEKA
0201: EIDDSEFMTP RENGGIVLDN GSTDEVDGVA TEAIMKSESS EVIPAQGTDA GDLKECAPDP ELGDDKIEVK LNASVDPSGE IQDDTSEEVH GNSAHMTLEH
0301: QDEVTRDMKD DSLGTNMSHK DRNGEEMSTD GIQNTEIRDC GNGYAEAGSS PPFLENSSNQ PLSVQEASAA EPKEASNKDD QSQISDEEHR DHDNTSVVEE
0401: PESIQEKIIQ VTGEQHVQPA ADISSSSERS AGTVPTPVRP SSENSAAAGP TPVHPTGLGR AAPLLEPASR VVQQPRANGT VSNSQSQQME DSSSGEAEEY
0501: DETREKLQMI RVKFLRLAHR LGQTPHNVVV AQVLYRLGLA EQLRGRNGGR VGAFSFDRAS AMAEQLEAAG QEPLDFSCTI MVLGKTGVGK SATINSIFDE
0601: VKFNTSAFHM GTKKVQDVVG TVQGIKVRVI DTPGLLPSWA DQRSNEKILQ SVKHFIKKTP PDIVLYLDRL DMQSRDFSDM PLLRTITEIF GPSIWFNAIV
0701: VLTHAASAPP EGPNGTASSY DTFFTQRSHV VQQAIRQAAG DMRLMNPVSL VENHSACRTN RAGQRVLPNG QVWKPHLLLL SFASKILAEA NALLKLQDSP
0801: PGKPYVARAR APPLPFLLST LLQSRPQLKL PEEQFGDEDS LDDDLDESSE SDDENEHDDL PPFKPLTKAQ VEKLSKAHKK AYFDELEYRE KLLMKKQLKE
0901: EKKRRKMLKK MAESAKDLPS DHSENVEEES GGAASVPVPM PDLALPASFD SDNPTHRYRY LDSSSNQWLV RPVLETHGWD HDVGYEGLNV ERLFVLKEKI
1001: PLSFSGQVTK DKKDANVQME ISSSVKHGKG KATSLGFDLQ TVGKDLAYTL RSETRFTNFR RNNATAGLSF TLLGDALSSG LKIEDKLVAS KRFKLVVSGG
1101: AMTGRGDIAY GGSLEAQLRD KDYPLGRFLT TLGLSVMDWH GDLAVGYNVQ SQIPVGRYTN LVARANLNNR GAGQISIRLN SSEQLQIALI GLIPLLKKLV
1201: GYHQQLQFGQ Y
0101: AVGADTDSGK LGEDEVIAKQ DLEERDGQGN DYVPLDGVDS GVPGDGEICD ESCGVGDDNL ESSDGGDGKE ESGLNSDREM LVLENGSMVD GNSGLVSEKA
0201: EIDDSEFMTP RENGGIVLDN GSTDEVDGVA TEAIMKSESS EVIPAQGTDA GDLKECAPDP ELGDDKIEVK LNASVDPSGE IQDDTSEEVH GNSAHMTLEH
0301: QDEVTRDMKD DSLGTNMSHK DRNGEEMSTD GIQNTEIRDC GNGYAEAGSS PPFLENSSNQ PLSVQEASAA EPKEASNKDD QSQISDEEHR DHDNTSVVEE
0401: PESIQEKIIQ VTGEQHVQPA ADISSSSERS AGTVPTPVRP SSENSAAAGP TPVHPTGLGR AAPLLEPASR VVQQPRANGT VSNSQSQQME DSSSGEAEEY
0501: DETREKLQMI RVKFLRLAHR LGQTPHNVVV AQVLYRLGLA EQLRGRNGGR VGAFSFDRAS AMAEQLEAAG QEPLDFSCTI MVLGKTGVGK SATINSIFDE
0601: VKFNTSAFHM GTKKVQDVVG TVQGIKVRVI DTPGLLPSWA DQRSNEKILQ SVKHFIKKTP PDIVLYLDRL DMQSRDFSDM PLLRTITEIF GPSIWFNAIV
0701: VLTHAASAPP EGPNGTASSY DTFFTQRSHV VQQAIRQAAG DMRLMNPVSL VENHSACRTN RAGQRVLPNG QVWKPHLLLL SFASKILAEA NALLKLQDSP
0801: PGKPYVARAR APPLPFLLST LLQSRPQLKL PEEQFGDEDS LDDDLDESSE SDDENEHDDL PPFKPLTKAQ VEKLSKAHKK AYFDELEYRE KLLMKKQLKE
0901: EKKRRKMLKK MAESAKDLPS DHSENVEEES GGAASVPVPM PDLALPASFD SDNPTHRYRY LDSSSNQWLV RPVLETHGWD HDVGYEGLNV ERLFVLKEKI
1001: PLSFSGQVTK DKKDANVQME ISSSVKHGKG KATSLGFDLQ TVGKDLAYTL RSETRFTNFR RNNATAGLSF TLLGDALSSG LKIEDKLVAS KRFKLVVSGG
1101: AMTGRGDIAY GGSLEAQLRD KDYPLGRFLT TLGLSVMDWH GDLAVGYNVQ SQIPVGRYTN LVARANLNNR GAGQISIRLN SSEQLQIALI GLIPLLKKLV
1201: GYHQQLQFGQ Y
0001: MGDGTEFVVR SDREDKKLAE DRISDEQVVK NELVRSDEVR DDNEDEVFEE AIGSENDEQE EEEDPKRELF ESDDLPLVET LKSSMVEHEV EDFEEAVGDL
0101: DETSSNEGGV KDFTAVGESH GAGEAEFDVL ATKMNGDKGE GGGGGSYDKV ESSLDVVDTT ENATSTNTNG SNLAAEHVGI ENGKTHSFLG NGIASPKNKE
0201: VVAEVIPKDD GIEEPWNDGI EVDNWEERVD GIQTEQEVEE GEGTTENQFE KRTEEEVVEG EGTSKNLFEK QTEQDVVEGE GTSKDLFENG SVCMDSESEA
0301: ERNGETGAAY TSNIVTNASG DNEVSSAVTS SPLEESSSGE KGETEGDSTC LKPEQHLASS PHSYPESTEV HSNSGSPGVT SREHKPVQSA NGGHDVQSPQ
0401: PNKELEKQQS SRVHVDPEIT ENSHVETEPE VVSSVSPTES RSNPAALPPA RPAGLGRASP LLEPASRAPQ QSRVNGNGSH NQFQQAEDST TTEADEHDET
0501: REKLQLIRVK FLRLAHRLGQ TPHNVVVAQV LYRLGLAEQL RGRNGSRVGA FSFDRASAMA EQLEAAGQDP LDFSCTIMVL GKSGVGKSAT INSIFDEVKF
0601: CTDAFQMGTK RVQDVEGLVQ GIKVRVIDTP GLLPSWSDQA KNEKILNSVK AFIKKNPPDI VLYLDRLDMQ SRDSGDMPLL RTISDVFGPS IWFNAIVGLT
0701: HAASVPPDGP NGTASSYDMF VTQRSHVIQQ AIRQAAGDMR LMNPVSLVEN HSACRTNRAG QRVLPNGQVW KPHLLLLSFA SKILAEANAL LKLQDNIPGR
0801: PFAARSKAPP LPFLLSSLLQ SRPQPKLPEQ QYGDEEDEDD LEESSDSDEE SEYDQLPPFK SLTKAQMATL SKSQKKQYLD EMEYREKLLM KKQMKEERKR
0901: RKMFKKFAAE IKDLPDGYSE NVEEESGGPA SVPVPMPDLS LPASFDSDNP THRYRYLDSS NQWLVRPVLE THGWDHDIGY EGVNAERLFV VKEKIPISVS
1001: GQVTKDKKDA NVQLEMASSV KHGEGKSTSL GFDMQTVGKE LAYTLRSETR FNNFRRNKAA AGLSVTHLGD SVSAGLKVED KFIASKWFRI VMSGGAMTSR
1101: GDFAYGGTLE AQLRDKDYPL GRFLTTLGLS VMDWHGDLAI GGNIQSQVPI GRSSNLIARA NLNNRGAGQV SVRVNSSEQL QLAMVAIVPL FKKLLSYYYP
1201: QTQYGQ
0101: DETSSNEGGV KDFTAVGESH GAGEAEFDVL ATKMNGDKGE GGGGGSYDKV ESSLDVVDTT ENATSTNTNG SNLAAEHVGI ENGKTHSFLG NGIASPKNKE
0201: VVAEVIPKDD GIEEPWNDGI EVDNWEERVD GIQTEQEVEE GEGTTENQFE KRTEEEVVEG EGTSKNLFEK QTEQDVVEGE GTSKDLFENG SVCMDSESEA
0301: ERNGETGAAY TSNIVTNASG DNEVSSAVTS SPLEESSSGE KGETEGDSTC LKPEQHLASS PHSYPESTEV HSNSGSPGVT SREHKPVQSA NGGHDVQSPQ
0401: PNKELEKQQS SRVHVDPEIT ENSHVETEPE VVSSVSPTES RSNPAALPPA RPAGLGRASP LLEPASRAPQ QSRVNGNGSH NQFQQAEDST TTEADEHDET
0501: REKLQLIRVK FLRLAHRLGQ TPHNVVVAQV LYRLGLAEQL RGRNGSRVGA FSFDRASAMA EQLEAAGQDP LDFSCTIMVL GKSGVGKSAT INSIFDEVKF
0601: CTDAFQMGTK RVQDVEGLVQ GIKVRVIDTP GLLPSWSDQA KNEKILNSVK AFIKKNPPDI VLYLDRLDMQ SRDSGDMPLL RTISDVFGPS IWFNAIVGLT
0701: HAASVPPDGP NGTASSYDMF VTQRSHVIQQ AIRQAAGDMR LMNPVSLVEN HSACRTNRAG QRVLPNGQVW KPHLLLLSFA SKILAEANAL LKLQDNIPGR
0801: PFAARSKAPP LPFLLSSLLQ SRPQPKLPEQ QYGDEEDEDD LEESSDSDEE SEYDQLPPFK SLTKAQMATL SKSQKKQYLD EMEYREKLLM KKQMKEERKR
0901: RKMFKKFAAE IKDLPDGYSE NVEEESGGPA SVPVPMPDLS LPASFDSDNP THRYRYLDSS NQWLVRPVLE THGWDHDIGY EGVNAERLFV VKEKIPISVS
1001: GQVTKDKKDA NVQLEMASSV KHGEGKSTSL GFDMQTVGKE LAYTLRSETR FNNFRRNKAA AGLSVTHLGD SVSAGLKVED KFIASKWFRI VMSGGAMTSR
1101: GDFAYGGTLE AQLRDKDYPL GRFLTTLGLS VMDWHGDLAI GGNIQSQVPI GRSSNLIARA NLNNRGAGQV SVRVNSSEQL QLAMVAIVPL FKKLLSYYYP
1201: QTQYGQ
Arabidopsis Description
TOC132Translocase of chloroplast 132, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9SLF3]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.