Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| HORVU1Hr1G053280.1 | Barley | mitochondrion | 63.48 | 97.27 |
| TraesCS1D01G211300.1 | Wheat | cytosol, golgi | 97.1 | 96.55 |
| TraesCS1B01G222000.1 | Wheat | cytosol | 95.88 | 95.34 |
| Os10t0548800-01 | Rice | cytosol, plasma membrane, plastid | 71.16 | 75.4 |
| EER91974 | Sorghum | cytosol | 67.7 | 73.1 |
| Zm00001d029846_P001 | Maize | plastid | 68.07 | 72.92 |
| Zm00001d047130_P001 | Maize | cytosol | 66.48 | 69.4 |
| CDX70657 | Canola | cytosol | 15.17 | 55.86 |
| CDY66172 | Canola | cytosol | 46.54 | 50.41 |
| CDX70659 | Canola | cytosol | 5.06 | 50.0 |
| CDX70551 | Canola | cytosol | 16.57 | 49.17 |
| PGSC0003DMT400024781 | Potato | cytosol | 48.5 | 48.91 |
| Bra006330.1-P | Field mustard | cytosol | 29.59 | 47.66 |
| CDX78660 | Canola | cytosol | 29.4 | 47.36 |
| AT3G16620.1 | Thale cress | cytosol | 47.57 | 46.65 |
| Solyc11g043010.1.1 | Tomato | nucleus | 30.9 | 45.33 |
| CDY43117 | Canola | cytosol | 46.54 | 45.02 |
| Bra022170.1-P | Field mustard | nucleus | 44.29 | 44.5 |
| CDX92086 | Canola | cytosol, endoplasmic reticulum, vacuole | 44.29 | 44.5 |
| KRH24252 | Soybean | mitochondrion | 50.0 | 44.1 |
| AT2G16640.3 | Thale cress | cytosol | 49.16 | 43.53 |
| VIT_03s0038g02070.t01 | Wine grape | nucleus | 51.12 | 42.82 |
| CDX70641 | Canola | cytosol | 31.93 | 42.52 |
| CDX70550 | Canola | cytosol | 11.24 | 42.4 |
| CDX92087 | Canola | cytosol | 46.82 | 42.3 |
| GSMUA_Achr8P19440_001 | Banana | cytosol | 45.04 | 40.05 |
| PGSC0003DMT400004034 | Potato | cytosol | 51.03 | 39.84 |
| Solyc01g111240.2.1 | Tomato | nucleus | 49.81 | 39.67 |
| KRH29257 | Soybean | endoplasmic reticulum | 50.37 | 39.36 |
| CDX70658 | Canola | cytosol | 4.4 | 36.72 |
| TraesCS5A01G112900.1 | Wheat | mitochondrion | 26.87 | 36.61 |
| GSMUA_Achr11P... | Banana | cytosol | 48.03 | 36.38 |
| TraesCS1A01G093900.3 | Wheat | cytosol, nucleus, plastid | 39.79 | 29.85 |
| TraesCS4A01G072800.1 | Wheat | golgi, plastid | 8.33 | 27.3 |
| TraesCS4A01G358400.1 | Wheat | plastid | 30.06 | 26.93 |
Protein Annotations
| MapMan:23.1.2.2 | Gene3D:3.40.50.300 | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005488 |
| GO:GO:0005525 | GO:GO:0016787 | GO:GO:0016817 | InterPro:G_AIG1 | InterPro:IPR006703 | InterPro:P-loop_NTPase |
| PFAM:PF04548 | PFAM:PF11886 | PFscan:PS51720 | PANTHER:PTHR10903 | PANTHER:PTHR10903:SF47 | SUPFAM:SSF52540 |
| TIGRFAMs:TIGR00993 | InterPro:TOC159_MAD | InterPro:Toc86_159 | EnsemblPlantsGene:TraesCS1A01G208000 | EnsemblPlants:TraesCS1A01G208000.1 | TIGR:cd01853 |
| SEG:seg | : | : | : | : | : |
Description
No Description!
Coordinates
chr1A:+:369694947..369698153
Molecular Weight (calculated)
115782.0 Da
IEP (calculated)
4.412
GRAVY (calculated)
-0.466
Length
1068 amino acids
Sequence
(BLAST)
(BLAST)
0001: MDDSAIGEKR LLEPEDRESP GGVAEEEVGG AQVGAEPAPV AAAAEVGGSG EILDAREGDA AEAVVQAQEG GGGEVVEVRQ RDVGVEEVVS DVAWAEATMD
0101: PSAGYDQQAA RNGPPTAVES DEDADLFVEV EQQELAGSDQ SEEFFHNAQA SVTGESVAAE CEAIEDYRPA EIGVEDDAHD EHRERLEEEA MLEAIRLCVT
0201: DAVLAEHLDE EPEKGREDVP ACDINPELPM NSSEPEQVQE AMLVDQSKEQ PEYSKGDTAA HDSKLEVPTQ SGGEPDVVVE ELDDSNSSGD ENKASSAPAR
0301: SSSAAAGQAN GPSLLARPAG LGASSSLLPP ARPVQQVRAN GPVAVDRDTR QDTESAGDDG DENDEIREKL QMIRVKFLRL ANRFGQTPHN MVVSQVLYRL
0401: GLAEQIRRNG RGVFNFGRAQ EIAERLEAAG NEPLDLSCTI LVLGKTGVGK SATINSIFDD VKLETDAFES STRKVQEVVG MVEGIQVKVI DTPGLSSSSS
0501: DQQYNQKVLN SVKKIVSKNP PDIVLYFDRL DLQSRDYGDV PLLQTISKVF GASVWFNAIV VLTHAASAPP DGPNGIPLSY EMFVTQRSHV VQQAIRQAAA
0601: DVRLMNPVAL VENHSACRTN RSGQRVLPNG QVWKPQLLLL CFASKVLAEA NSFLKLQDSP AGKTSSTRVA PLPFLLSSLL QSRAPLKLPE EQFGDDDDLE
0701: DDLADDCDSD DGSDYDDLPP FKRLTKAQLS KLNHAQRKAY LEELDYREKL FYKKQLKEEH MRRKMMKKMA AEARAREDDY GNSNVDDDGS TPTNVAVPMP
0801: DMVLPSTFDS DYPSHRYRFL DTPSEWLVRP VLETQGWDHD VGYEGLNVER LFAVKGKVPL SVSGQLTKDK KDSSLQMEVA SSVKHGEGKT SSVGLDLQSV
0901: GKDMAYTIRG ESRFKNFRRN NTAAGISATL LGDTLSAGVK IEDRLIVNKQ LRLLVSGGTM SGKGDAAYGG RLEATLRDKD YPIGRMLSTL AISVVDWHGD
1001: LAVGCNAQSQ IPAGRSSNVI ASLNVSNKGT GQVGIRLNSS EHLQIALLAL VPIFKNVRKL LDNYYESA
0101: PSAGYDQQAA RNGPPTAVES DEDADLFVEV EQQELAGSDQ SEEFFHNAQA SVTGESVAAE CEAIEDYRPA EIGVEDDAHD EHRERLEEEA MLEAIRLCVT
0201: DAVLAEHLDE EPEKGREDVP ACDINPELPM NSSEPEQVQE AMLVDQSKEQ PEYSKGDTAA HDSKLEVPTQ SGGEPDVVVE ELDDSNSSGD ENKASSAPAR
0301: SSSAAAGQAN GPSLLARPAG LGASSSLLPP ARPVQQVRAN GPVAVDRDTR QDTESAGDDG DENDEIREKL QMIRVKFLRL ANRFGQTPHN MVVSQVLYRL
0401: GLAEQIRRNG RGVFNFGRAQ EIAERLEAAG NEPLDLSCTI LVLGKTGVGK SATINSIFDD VKLETDAFES STRKVQEVVG MVEGIQVKVI DTPGLSSSSS
0501: DQQYNQKVLN SVKKIVSKNP PDIVLYFDRL DLQSRDYGDV PLLQTISKVF GASVWFNAIV VLTHAASAPP DGPNGIPLSY EMFVTQRSHV VQQAIRQAAA
0601: DVRLMNPVAL VENHSACRTN RSGQRVLPNG QVWKPQLLLL CFASKVLAEA NSFLKLQDSP AGKTSSTRVA PLPFLLSSLL QSRAPLKLPE EQFGDDDDLE
0701: DDLADDCDSD DGSDYDDLPP FKRLTKAQLS KLNHAQRKAY LEELDYREKL FYKKQLKEEH MRRKMMKKMA AEARAREDDY GNSNVDDDGS TPTNVAVPMP
0801: DMVLPSTFDS DYPSHRYRFL DTPSEWLVRP VLETQGWDHD VGYEGLNVER LFAVKGKVPL SVSGQLTKDK KDSSLQMEVA SSVKHGEGKT SSVGLDLQSV
0901: GKDMAYTIRG ESRFKNFRRN NTAAGISATL LGDTLSAGVK IEDRLIVNKQ LRLLVSGGTM SGKGDAAYGG RLEATLRDKD YPIGRMLSTL AISVVDWHGD
1001: LAVGCNAQSQ IPAGRSSNVI ASLNVSNKGT GQVGIRLNSS EHLQIALLAL VPIFKNVRKL LDNYYESA
0001: MGDGTEFVVR SDREDKKLAE DRISDEQVVK NELVRSDEVR DDNEDEVFEE AIGSENDEQE EEEDPKRELF ESDDLPLVET LKSSMVEHEV EDFEEAVGDL
0101: DETSSNEGGV KDFTAVGESH GAGEAEFDVL ATKMNGDKGE GGGGGSYDKV ESSLDVVDTT ENATSTNTNG SNLAAEHVGI ENGKTHSFLG NGIASPKNKE
0201: VVAEVIPKDD GIEEPWNDGI EVDNWEERVD GIQTEQEVEE GEGTTENQFE KRTEEEVVEG EGTSKNLFEK QTEQDVVEGE GTSKDLFENG SVCMDSESEA
0301: ERNGETGAAY TSNIVTNASG DNEVSSAVTS SPLEESSSGE KGETEGDSTC LKPEQHLASS PHSYPESTEV HSNSGSPGVT SREHKPVQSA NGGHDVQSPQ
0401: PNKELEKQQS SRVHVDPEIT ENSHVETEPE VVSSVSPTES RSNPAALPPA RPAGLGRASP LLEPASRAPQ QSRVNGNGSH NQFQQAEDST TTEADEHDET
0501: REKLQLIRVK FLRLAHRLGQ TPHNVVVAQV LYRLGLAEQL RGRNGSRVGA FSFDRASAMA EQLEAAGQDP LDFSCTIMVL GKSGVGKSAT INSIFDEVKF
0601: CTDAFQMGTK RVQDVEGLVQ GIKVRVIDTP GLLPSWSDQA KNEKILNSVK AFIKKNPPDI VLYLDRLDMQ SRDSGDMPLL RTISDVFGPS IWFNAIVGLT
0701: HAASVPPDGP NGTASSYDMF VTQRSHVIQQ AIRQAAGDMR LMNPVSLVEN HSACRTNRAG QRVLPNGQVW KPHLLLLSFA SKILAEANAL LKLQDNIPGR
0801: PFAARSKAPP LPFLLSSLLQ SRPQPKLPEQ QYGDEEDEDD LEESSDSDEE SEYDQLPPFK SLTKAQMATL SKSQKKQYLD EMEYREKLLM KKQMKEERKR
0901: RKMFKKFAAE IKDLPDGYSE NVEEESGGPA SVPVPMPDLS LPASFDSDNP THRYRYLDSS NQWLVRPVLE THGWDHDIGY EGVNAERLFV VKEKIPISVS
1001: GQVTKDKKDA NVQLEMASSV KHGEGKSTSL GFDMQTVGKE LAYTLRSETR FNNFRRNKAA AGLSVTHLGD SVSAGLKVED KFIASKWFRI VMSGGAMTSR
1101: GDFAYGGTLE AQLRDKDYPL GRFLTTLGLS VMDWHGDLAI GGNIQSQVPI GRSSNLIARA NLNNRGAGQV SVRVNSSEQL QLAMVAIVPL FKKLLSYYYP
1201: QTQYGQ
0101: DETSSNEGGV KDFTAVGESH GAGEAEFDVL ATKMNGDKGE GGGGGSYDKV ESSLDVVDTT ENATSTNTNG SNLAAEHVGI ENGKTHSFLG NGIASPKNKE
0201: VVAEVIPKDD GIEEPWNDGI EVDNWEERVD GIQTEQEVEE GEGTTENQFE KRTEEEVVEG EGTSKNLFEK QTEQDVVEGE GTSKDLFENG SVCMDSESEA
0301: ERNGETGAAY TSNIVTNASG DNEVSSAVTS SPLEESSSGE KGETEGDSTC LKPEQHLASS PHSYPESTEV HSNSGSPGVT SREHKPVQSA NGGHDVQSPQ
0401: PNKELEKQQS SRVHVDPEIT ENSHVETEPE VVSSVSPTES RSNPAALPPA RPAGLGRASP LLEPASRAPQ QSRVNGNGSH NQFQQAEDST TTEADEHDET
0501: REKLQLIRVK FLRLAHRLGQ TPHNVVVAQV LYRLGLAEQL RGRNGSRVGA FSFDRASAMA EQLEAAGQDP LDFSCTIMVL GKSGVGKSAT INSIFDEVKF
0601: CTDAFQMGTK RVQDVEGLVQ GIKVRVIDTP GLLPSWSDQA KNEKILNSVK AFIKKNPPDI VLYLDRLDMQ SRDSGDMPLL RTISDVFGPS IWFNAIVGLT
0701: HAASVPPDGP NGTASSYDMF VTQRSHVIQQ AIRQAAGDMR LMNPVSLVEN HSACRTNRAG QRVLPNGQVW KPHLLLLSFA SKILAEANAL LKLQDNIPGR
0801: PFAARSKAPP LPFLLSSLLQ SRPQPKLPEQ QYGDEEDEDD LEESSDSDEE SEYDQLPPFK SLTKAQMATL SKSQKKQYLD EMEYREKLLM KKQMKEERKR
0901: RKMFKKFAAE IKDLPDGYSE NVEEESGGPA SVPVPMPDLS LPASFDSDNP THRYRYLDSS NQWLVRPVLE THGWDHDIGY EGVNAERLFV VKEKIPISVS
1001: GQVTKDKKDA NVQLEMASSV KHGEGKSTSL GFDMQTVGKE LAYTLRSETR FNNFRRNKAA AGLSVTHLGD SVSAGLKVED KFIASKWFRI VMSGGAMTSR
1101: GDFAYGGTLE AQLRDKDYPL GRFLTTLGLS VMDWHGDLAI GGNIQSQVPI GRSSNLIARA NLNNRGAGQV SVRVNSSEQL QLAMVAIVPL FKKLLSYYYP
1201: QTQYGQ
Arabidopsis Description
TOC132Translocase of chloroplast 132, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9SLF3]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.