Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX70659 | Canola | cytosol | 36.04 | 94.44 |
| CDX70658 | Canola | cytosol | 28.27 | 62.5 |
| CDX78660 | Canola | cytosol | 85.51 | 36.5 |
| CDX70641 | Canola | cytosol | 78.45 | 27.68 |
| CDY66172 | Canola | cytosol | 62.9 | 18.05 |
| HORVU1Hr1G053280.1 | Barley | mitochondrion | 41.7 | 16.93 |
| CDY43117 | Canola | cytosol | 63.96 | 16.39 |
| CDX97270 | Canola | cytosol | 24.38 | 15.72 |
| CDX92087 | Canola | cytosol | 63.6 | 15.23 |
| AT2G16640.3 | Thale cress | cytosol | 60.07 | 14.1 |
| CDX92086 | Canola | cytosol, endoplasmic reticulum, vacuole | 52.3 | 13.92 |
| PGSC0003DMT400024781 | Potato | cytosol | 49.12 | 13.13 |
| Os10t0548800-01 | Rice | cytosol, plasma membrane, plastid | 45.58 | 12.8 |
| EER91974 | Sorghum | cytosol | 44.52 | 12.74 |
| Zm00001d029846_P001 | Maize | plastid | 43.82 | 12.44 |
| Zm00001d047130_P001 | Maize | cytosol | 43.46 | 12.02 |
| KRH24252 | Soybean | mitochondrion | 50.88 | 11.89 |
| VIT_03s0038g02070.t01 | Wine grape | nucleus | 50.88 | 11.29 |
| TraesCS1B01G222000.1 | Wheat | cytosol | 42.76 | 11.27 |
| TraesCS1A01G208000.1 | Wheat | cytosol | 42.4 | 11.24 |
| TraesCS1D01G211300.1 | Wheat | cytosol, golgi | 42.4 | 11.17 |
| KRH29257 | Soybean | endoplasmic reticulum | 51.59 | 10.68 |
| Solyc01g111240.2.1 | Tomato | nucleus | 49.47 | 10.44 |
| GSMUA_Achr8P19440_001 | Banana | cytosol | 43.46 | 10.24 |
| PGSC0003DMT400004034 | Potato | cytosol | 49.47 | 10.23 |
| CDY50376 | Canola | cytosol | 25.09 | 10.19 |
| Solyc11g043010.1.1 | Tomato | nucleus | 22.61 | 8.79 |
| GSMUA_Achr11P... | Banana | cytosol | 41.7 | 8.37 |
| CDY35813 | Canola | cytosol | 22.61 | 8.17 |
| CDX92471 | Canola | cytosol | 22.26 | 8.05 |
| CDX91288 | Canola | cytosol | 20.49 | 7.38 |
| CDX70551 | Canola | cytosol | 8.83 | 6.94 |
| CDX70657 | Canola | cytosol | 6.71 | 6.55 |
| CDX98809 | Canola | cytosol | 6.01 | 3.78 |
| CDX70178 | Canola | cytosol | 8.83 | 3.29 |
| CDY22896 | Canola | cytosol | 10.95 | 3.06 |
| CDY44175 | Canola | cytosol | 9.89 | 3.03 |
| CDX97269 | Canola | cytosol | 0.71 | 3.03 |
| CDX89987 | Canola | cytosol | 3.18 | 3.02 |
| CDY15228 | Canola | cytosol | 3.18 | 3.02 |
| CDY55323 | Canola | cytosol | 2.83 | 2.69 |
| CDY32453 | Canola | cytosol | 2.83 | 2.69 |
| CDX80936 | Canola | cytosol | 2.83 | 2.56 |
| CDY52130 | Canola | cytosol, plastid | 2.83 | 2.56 |
| CDX98810 | Canola | cytosol | 2.83 | 2.56 |
Protein Annotations
| EnsemblPlants:CDX70550 | EnsemblPlantsGene:GSBRNA2T00140388001 | InterPro:TOC159_MAD | PANTHER:PTHR10903 | PANTHER:PTHR10903:SF47 | PFAM:PF11886 |
| ProteinID:CDX70550 | ProteinID:CDX70550.1 | SEG:seg | UniParc:UPI0004EDC8DA | MapMan:35.1 | : |
Description
BnaC03g06340D
Coordinates
chrLK031791:-:985915..986766
Molecular Weight (calculated)
30613.8 Da
IEP (calculated)
7.071
GRAVY (calculated)
-0.160
Length
283 amino acids
Sequence
(BLAST)
(BLAST)
001: MEEENERRRP HITLPPTMPV PIPIWYDTNN HPVRTHPPID LSNPSLLVTP VLVLPGWDHD IGYDGLSAEG TLVNVKEKIH MSYSGQATEN FMKKGANVQL
101: EMASLVVHGE EGNRSTSLGF EMQKKTWDEL SCTLRSDFNF MKHKAAAGLA VTLLGDSVSA GVKAERKLIA NKRFGMDVCG GGGMTCRGDA AYGGSLEAQL
201: LGSFFLSTLG LSVVDGHGGL AIGGNIQTQV HIGRSSDLTA RANLNSRGAV QVSIRANIFE QLEHAMAALV PLFKKLLSYY SPN
101: EMASLVVHGE EGNRSTSLGF EMQKKTWDEL SCTLRSDFNF MKHKAAAGLA VTLLGDSVSA GVKAERKLIA NKRFGMDVCG GGGMTCRGDA AYGGSLEAQL
201: LGSFFLSTLG LSVVDGHGGL AIGGNIQTQV HIGRSSDLTA RANLNSRGAV QVSIRANIFE QLEHAMAALV PLFKKLLSYY SPN
0001: MGDGTEFVVR SDREDKKLAE DRISDEQVVK NELVRSDEVR DDNEDEVFEE AIGSENDEQE EEEDPKRELF ESDDLPLVET LKSSMVEHEV EDFEEAVGDL
0101: DETSSNEGGV KDFTAVGESH GAGEAEFDVL ATKMNGDKGE GGGGGSYDKV ESSLDVVDTT ENATSTNTNG SNLAAEHVGI ENGKTHSFLG NGIASPKNKE
0201: VVAEVIPKDD GIEEPWNDGI EVDNWEERVD GIQTEQEVEE GEGTTENQFE KRTEEEVVEG EGTSKNLFEK QTEQDVVEGE GTSKDLFENG SVCMDSESEA
0301: ERNGETGAAY TSNIVTNASG DNEVSSAVTS SPLEESSSGE KGETEGDSTC LKPEQHLASS PHSYPESTEV HSNSGSPGVT SREHKPVQSA NGGHDVQSPQ
0401: PNKELEKQQS SRVHVDPEIT ENSHVETEPE VVSSVSPTES RSNPAALPPA RPAGLGRASP LLEPASRAPQ QSRVNGNGSH NQFQQAEDST TTEADEHDET
0501: REKLQLIRVK FLRLAHRLGQ TPHNVVVAQV LYRLGLAEQL RGRNGSRVGA FSFDRASAMA EQLEAAGQDP LDFSCTIMVL GKSGVGKSAT INSIFDEVKF
0601: CTDAFQMGTK RVQDVEGLVQ GIKVRVIDTP GLLPSWSDQA KNEKILNSVK AFIKKNPPDI VLYLDRLDMQ SRDSGDMPLL RTISDVFGPS IWFNAIVGLT
0701: HAASVPPDGP NGTASSYDMF VTQRSHVIQQ AIRQAAGDMR LMNPVSLVEN HSACRTNRAG QRVLPNGQVW KPHLLLLSFA SKILAEANAL LKLQDNIPGR
0801: PFAARSKAPP LPFLLSSLLQ SRPQPKLPEQ QYGDEEDEDD LEESSDSDEE SEYDQLPPFK SLTKAQMATL SKSQKKQYLD EMEYREKLLM KKQMKEERKR
0901: RKMFKKFAAE IKDLPDGYSE NVEEESGGPA SVPVPMPDLS LPASFDSDNP THRYRYLDSS NQWLVRPVLE THGWDHDIGY EGVNAERLFV VKEKIPISVS
1001: GQVTKDKKDA NVQLEMASSV KHGEGKSTSL GFDMQTVGKE LAYTLRSETR FNNFRRNKAA AGLSVTHLGD SVSAGLKVED KFIASKWFRI VMSGGAMTSR
1101: GDFAYGGTLE AQLRDKDYPL GRFLTTLGLS VMDWHGDLAI GGNIQSQVPI GRSSNLIARA NLNNRGAGQV SVRVNSSEQL QLAMVAIVPL FKKLLSYYYP
1201: QTQYGQ
0101: DETSSNEGGV KDFTAVGESH GAGEAEFDVL ATKMNGDKGE GGGGGSYDKV ESSLDVVDTT ENATSTNTNG SNLAAEHVGI ENGKTHSFLG NGIASPKNKE
0201: VVAEVIPKDD GIEEPWNDGI EVDNWEERVD GIQTEQEVEE GEGTTENQFE KRTEEEVVEG EGTSKNLFEK QTEQDVVEGE GTSKDLFENG SVCMDSESEA
0301: ERNGETGAAY TSNIVTNASG DNEVSSAVTS SPLEESSSGE KGETEGDSTC LKPEQHLASS PHSYPESTEV HSNSGSPGVT SREHKPVQSA NGGHDVQSPQ
0401: PNKELEKQQS SRVHVDPEIT ENSHVETEPE VVSSVSPTES RSNPAALPPA RPAGLGRASP LLEPASRAPQ QSRVNGNGSH NQFQQAEDST TTEADEHDET
0501: REKLQLIRVK FLRLAHRLGQ TPHNVVVAQV LYRLGLAEQL RGRNGSRVGA FSFDRASAMA EQLEAAGQDP LDFSCTIMVL GKSGVGKSAT INSIFDEVKF
0601: CTDAFQMGTK RVQDVEGLVQ GIKVRVIDTP GLLPSWSDQA KNEKILNSVK AFIKKNPPDI VLYLDRLDMQ SRDSGDMPLL RTISDVFGPS IWFNAIVGLT
0701: HAASVPPDGP NGTASSYDMF VTQRSHVIQQ AIRQAAGDMR LMNPVSLVEN HSACRTNRAG QRVLPNGQVW KPHLLLLSFA SKILAEANAL LKLQDNIPGR
0801: PFAARSKAPP LPFLLSSLLQ SRPQPKLPEQ QYGDEEDEDD LEESSDSDEE SEYDQLPPFK SLTKAQMATL SKSQKKQYLD EMEYREKLLM KKQMKEERKR
0901: RKMFKKFAAE IKDLPDGYSE NVEEESGGPA SVPVPMPDLS LPASFDSDNP THRYRYLDSS NQWLVRPVLE THGWDHDIGY EGVNAERLFV VKEKIPISVS
1001: GQVTKDKKDA NVQLEMASSV KHGEGKSTSL GFDMQTVGKE LAYTLRSETR FNNFRRNKAA AGLSVTHLGD SVSAGLKVED KFIASKWFRI VMSGGAMTSR
1101: GDFAYGGTLE AQLRDKDYPL GRFLTTLGLS VMDWHGDLAI GGNIQSQVPI GRSSNLIARA NLNNRGAGQV SVRVNSSEQL QLAMVAIVPL FKKLLSYYYP
1201: QTQYGQ
Arabidopsis Description
TOC132Translocase of chloroplast 132, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9SLF3]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.