Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY66172 | Canola | cytosol | 77.67 | 93.1 |
| CDX92086 | Canola | cytosol, endoplasmic reticulum, vacuole | 77.24 | 85.89 |
| CDY43117 | Canola | cytosol | 80.03 | 85.69 |
| AT3G16620.1 | Thale cress | cytosol | 71.15 | 77.23 |
| CDX70659 | Canola | cytosol | 6.51 | 71.3 |
| CDX70657 | Canola | cytosol | 17.26 | 70.34 |
| CDX97269 | Canola | cytosol | 3.72 | 66.67 |
| HORVU1Hr1G053280.1 | Barley | mitochondrion | 39.0 | 66.14 |
| CDX78660 | Canola | cytosol | 36.46 | 65.01 |
| CDX70551 | Canola | cytosol | 19.63 | 64.44 |
| CDX70550 | Canola | cytosol | 15.23 | 63.6 |
| CDX70641 | Canola | cytosol | 39.59 | 58.35 |
| PGSC0003DMT400024781 | Potato | cytosol | 51.44 | 57.41 |
| Solyc11g043010.1.1 | Tomato | nucleus | 32.57 | 52.88 |
| KRH24252 | Soybean | mitochondrion | 53.89 | 52.6 |
| Os10t0548800-01 | Rice | cytosol, plasma membrane, plastid | 44.08 | 51.69 |
| EER91974 | Sorghum | cytosol | 43.23 | 51.67 |
| VIT_03s0038g02070.t01 | Wine grape | nucleus | 54.82 | 50.82 |
| Zm00001d029846_P001 | Maize | plastid | 42.55 | 50.45 |
| Zm00001d047130_P001 | Maize | cytosol | 42.64 | 49.27 |
| CDX70658 | Canola | cytosol | 5.33 | 49.22 |
| TraesCS1B01G222000.1 | Wheat | cytosol | 42.98 | 47.3 |
| TraesCS1A01G208000.1 | Wheat | cytosol | 42.3 | 46.82 |
| TraesCS1D01G211300.1 | Wheat | cytosol, golgi | 42.3 | 46.55 |
| KRH29257 | Soybean | endoplasmic reticulum | 53.81 | 46.53 |
| PGSC0003DMT400004034 | Potato | cytosol | 53.21 | 45.98 |
| Solyc01g111240.2.1 | Tomato | nucleus | 52.12 | 45.94 |
| CDY50376 | Canola | cytosol | 27.07 | 45.91 |
| CDX97270 | Canola | cytosol | 15.14 | 40.77 |
| GSMUA_Achr8P19440_001 | Banana | cytosol | 41.2 | 40.55 |
| CDX91288 | Canola | cytosol | 24.96 | 37.53 |
| CDX92471 | Canola | cytosol | 24.11 | 36.4 |
| CDY35813 | Canola | cytosol | 24.03 | 36.27 |
| GSMUA_Achr11P... | Banana | cytosol | 42.39 | 35.53 |
| CDY52130 | Canola | cytosol, plastid | 7.61 | 28.75 |
| CDX98810 | Canola | cytosol | 7.53 | 28.43 |
| CDX80936 | Canola | cytosol | 7.53 | 28.43 |
| CDX89987 | Canola | cytosol | 7.11 | 28.19 |
| CDY55323 | Canola | cytosol | 7.02 | 27.95 |
| CDY32453 | Canola | cytosol | 7.02 | 27.95 |
| CDY15228 | Canola | cytosol | 7.02 | 27.85 |
| CDX70178 | Canola | cytosol | 9.14 | 14.23 |
| CDY44175 | Canola | cytosol | 11.08 | 14.18 |
| CDY22896 | Canola | cytosol | 10.83 | 12.64 |
| CDX98809 | Canola | cytosol | 1.78 | 4.67 |
Protein Annotations
| MapMan:23.1.2.2 | Gene3D:3.40.50.300 | GO:A0A078DT88 | EnsemblPlants:CDX92087 | ProteinID:CDX92087 | ProteinID:CDX92087.1 |
| GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005488 | GO:GO:0005525 | GO:GO:0016787 |
| GO:GO:0016817 | EnsemblPlantsGene:GSBRNA2T00153773001 | InterPro:G_AIG1 | InterPro:IPR006703 | InterPro:P-loop_NTPase | PFAM:PF04548 |
| PFAM:PF11886 | PFscan:PS51720 | PANTHER:PTHR10903 | PANTHER:PTHR10903:SF47 | SUPFAM:SSF52540 | TIGRFAMs:TIGR00993 |
| InterPro:TOC159_MAD | InterPro:Toc86_159 | UniParc:UPI0004EE4228 | SEG:seg | : | : |
Description
BnaA05g23200D
Coordinates
chrLK031871:-:100101..104681
Molecular Weight (calculated)
129707.0 Da
IEP (calculated)
4.627
GRAVY (calculated)
-0.663
Length
1182 amino acids
Sequence
(BLAST)
(BLAST)
0001: MEEKKLADDG NSDEQVERIE LVVSDVDARD TEDEVFEEAI DSSKPESFQA DDGLHEDSPS EEVKDSKVNG ESHGEANGQD ITTGEAVPGF VTSRMNGVEG
0101: EASAGNVSDT ATLSFSENGT VSLEKKAVLL SFGSDMEEKK LVDDRISDDQ VDNNILLVSN VDARDTVDEV FEEAINGFQD DDGLHEDLPR EATPAVYMDD
0201: LEEVSSNEKE VIDSMVSGES HGEANVQDIT TGEAAPGFVT FKMNGDEGKS GTDNVSETAT HSFSENGKKQ LVAEVIEETR NGGIEEENRD ENVDVSAGRG
0301: TEQEAQRNGE TAADYNTVKR ASGERSLNDS IACAGTLSPL EKSSSEEKGE TEGHISREHD TVQNSKGGLG VEHTSQPNKE FEKKQGSRVN MSPEIQESPH
0401: LERKSEEASS VSPTESTSNT AASPPARPAG LGRDAPLLES TPRVPHQPRV NGNVSQNQSE QAEDPTPAET DEHDETREKL QLIRVKFLRL SHRLGQTPHN
0501: VVVAQVLYRL GLAEQLRGRN GSRVGAFSFD RASSMAEQLE AAGQDPLDFS CTVMVLGKSG VGKSATINSI FDEPKICTDA FQMGTKRVQE VEGFVQGIKV
0601: RVIDTPGLLP SWSDQHKNEK MLKSVKAFIK KNPPDIVLYL DRLDMQSRDS GDTPLLRTIT DVFGPSIWFN AIVGLTHAAS APPDGPNGTA SSYDMFVTQR
0701: SHVIQQAIRQ AAGDMRLMNP VSLVENHSAC RTNRAGQRVL PNGQVWKPHL LLLSFASKIL AEANALLKLQ DNNTPGRPFV ARSKAPPLPL LLSSFLQSRP
0801: QAKLPEEQYG DEEDEDDLDE SSGSDEESEY DQLPPFKRLT KAEMGSLSKS QKKEYLDEME YREKLFMKRQ MKEERKRRKM MKKFAAEIKE FANGHSENVE
0901: EERSEPASVP VPMPDLSLPA SFDSDNPTHR YRSLDSSNQW LVRPVLETQG WDHDVGYEGV NAERLFVVKE KIPISFSGQV TKDKKDANVQ LEMASSVKHG
1001: EGRSTSLGFE MQNAGKELAY TVRSDTKFNN FRKHKAAAGL SVTLLGDSVS AGLKVEDKLI ANKRFRMVMC GGAMTSRGDV AYGGSLEAQL RDKDYPLGRF
1101: LSTLGLSVMD WHGDLAIGGN IQSQVPIGRS SNLIARANLN NRGAGQVSLR VNSSEQLQLA LVALVPLFKK LLSYYSPQQM EY
0101: EASAGNVSDT ATLSFSENGT VSLEKKAVLL SFGSDMEEKK LVDDRISDDQ VDNNILLVSN VDARDTVDEV FEEAINGFQD DDGLHEDLPR EATPAVYMDD
0201: LEEVSSNEKE VIDSMVSGES HGEANVQDIT TGEAAPGFVT FKMNGDEGKS GTDNVSETAT HSFSENGKKQ LVAEVIEETR NGGIEEENRD ENVDVSAGRG
0301: TEQEAQRNGE TAADYNTVKR ASGERSLNDS IACAGTLSPL EKSSSEEKGE TEGHISREHD TVQNSKGGLG VEHTSQPNKE FEKKQGSRVN MSPEIQESPH
0401: LERKSEEASS VSPTESTSNT AASPPARPAG LGRDAPLLES TPRVPHQPRV NGNVSQNQSE QAEDPTPAET DEHDETREKL QLIRVKFLRL SHRLGQTPHN
0501: VVVAQVLYRL GLAEQLRGRN GSRVGAFSFD RASSMAEQLE AAGQDPLDFS CTVMVLGKSG VGKSATINSI FDEPKICTDA FQMGTKRVQE VEGFVQGIKV
0601: RVIDTPGLLP SWSDQHKNEK MLKSVKAFIK KNPPDIVLYL DRLDMQSRDS GDTPLLRTIT DVFGPSIWFN AIVGLTHAAS APPDGPNGTA SSYDMFVTQR
0701: SHVIQQAIRQ AAGDMRLMNP VSLVENHSAC RTNRAGQRVL PNGQVWKPHL LLLSFASKIL AEANALLKLQ DNNTPGRPFV ARSKAPPLPL LLSSFLQSRP
0801: QAKLPEEQYG DEEDEDDLDE SSGSDEESEY DQLPPFKRLT KAEMGSLSKS QKKEYLDEME YREKLFMKRQ MKEERKRRKM MKKFAAEIKE FANGHSENVE
0901: EERSEPASVP VPMPDLSLPA SFDSDNPTHR YRSLDSSNQW LVRPVLETQG WDHDVGYEGV NAERLFVVKE KIPISFSGQV TKDKKDANVQ LEMASSVKHG
1001: EGRSTSLGFE MQNAGKELAY TVRSDTKFNN FRKHKAAAGL SVTLLGDSVS AGLKVEDKLI ANKRFRMVMC GGAMTSRGDV AYGGSLEAQL RDKDYPLGRF
1101: LSTLGLSVMD WHGDLAIGGN IQSQVPIGRS SNLIARANLN NRGAGQVSLR VNSSEQLQLA LVALVPLFKK LLSYYSPQQM EY
0001: MGDGAEIVTR LYGDEKKLAE DGRISELVGS DEVKDNEEEV FEEAIGSQEG LKPESLKTDV LQEDFPLASN DEVCDLEETS RNERGVENLK VNYSEIGESH
0101: GEVNEQCITT KEADSDLVTL KMNDYDHGEV ADADISYGKM ASSLDVVENS EKATSNLATE DVNLENGNTH SSSENGVVSP DENKELVAEV ISVSACSVET
0201: GSNGIDDEKW EEEIDVSAGM VTEQRNGKTG AEFNSVKIVS GDKSLNDSIE VAAGTLSPLE KSSSEEKGET ESQNSNGGHD IQSNKEIVKQ QDSSVNIGPE
0301: IKESQHMERE SEVLSSVSPT ESRSDTAALP PARPAGLGRA APLLEPAPRV TQQPRVNGNV SHNQPQQAED STTAETDEHD ETREKLQFIR VKFLRLSHRL
0401: GQTPHNVVVA QVLYRLGLAE QLRGRNGSRV GAFSFDRASA MAEQLEAAAQ DPLDFSCTIM VLGKSGVGKS ATINSIFDEL KISTDAFQVG TKKVQDIEGF
0501: VQGIKVRVID TPGLLPSWSD QHKNEKILKS VRAFIKKSPP DIVLYLDRLD MQSRDSGDMP LLRTITDVFG PSIWFNAIVG LTHAASAPPD GPNGTASSYD
0601: MFVTQRSHVI QQAIRQAAGD MRLMNPVSLV ENHSACRTNR AGQRVLPNGQ VWKPHLLLLS FASKILAEAN ALLKLQDNIP GGQFATRSKA PPLPLLLSSL
0701: LQSRPQAKLP EQQYDDEDDE DDLDESSDSE EESEYDELPP FKRLTKAEMT KLSKSQKKEY LDEMEYREKL FMKRQMKEER KRRKLLKKFA AEIKDMPNGY
0801: SENVEEERSE PASVPVPMPD LSLPASFDSD NPTHRYRYLD TSNQWLVRPV LETHGWDHDI GYEGVNAERL FVVKDKIPVS FSGQVTKDKK DAHVQLELAS
0901: SVKHGEGRST SLGFDMQNAG KELAYTIRSE TRFNKFRKNK AAAGLSVTLL GDSVSAGLKV EDKLIANKRF RMVMSGGAMT SRGDVAYGGT LEAQFRDKDY
1001: PLGRFLSTLG LSVMDWHGDL AIGGNIQSQV PIGRSSNLIA RANLNNRGAG QVSIRVNSSE QLQLAVVALV PLFKKLLTYY SPEQMQYGH
0101: GEVNEQCITT KEADSDLVTL KMNDYDHGEV ADADISYGKM ASSLDVVENS EKATSNLATE DVNLENGNTH SSSENGVVSP DENKELVAEV ISVSACSVET
0201: GSNGIDDEKW EEEIDVSAGM VTEQRNGKTG AEFNSVKIVS GDKSLNDSIE VAAGTLSPLE KSSSEEKGET ESQNSNGGHD IQSNKEIVKQ QDSSVNIGPE
0301: IKESQHMERE SEVLSSVSPT ESRSDTAALP PARPAGLGRA APLLEPAPRV TQQPRVNGNV SHNQPQQAED STTAETDEHD ETREKLQFIR VKFLRLSHRL
0401: GQTPHNVVVA QVLYRLGLAE QLRGRNGSRV GAFSFDRASA MAEQLEAAAQ DPLDFSCTIM VLGKSGVGKS ATINSIFDEL KISTDAFQVG TKKVQDIEGF
0501: VQGIKVRVID TPGLLPSWSD QHKNEKILKS VRAFIKKSPP DIVLYLDRLD MQSRDSGDMP LLRTITDVFG PSIWFNAIVG LTHAASAPPD GPNGTASSYD
0601: MFVTQRSHVI QQAIRQAAGD MRLMNPVSLV ENHSACRTNR AGQRVLPNGQ VWKPHLLLLS FASKILAEAN ALLKLQDNIP GGQFATRSKA PPLPLLLSSL
0701: LQSRPQAKLP EQQYDDEDDE DDLDESSDSE EESEYDELPP FKRLTKAEMT KLSKSQKKEY LDEMEYREKL FMKRQMKEER KRRKLLKKFA AEIKDMPNGY
0801: SENVEEERSE PASVPVPMPD LSLPASFDSD NPTHRYRYLD TSNQWLVRPV LETHGWDHDI GYEGVNAERL FVVKDKIPVS FSGQVTKDKK DAHVQLELAS
0901: SVKHGEGRST SLGFDMQNAG KELAYTIRSE TRFNKFRKNK AAAGLSVTLL GDSVSAGLKV EDKLIANKRF RMVMSGGAMT SRGDVAYGGT LEAQFRDKDY
1001: PLGRFLSTLG LSVMDWHGDL AIGGNIQSQV PIGRSSNLIA RANLNNRGAG QVSIRVNSSE QLQLAVVALV PLFKKLLTYY SPEQMQYGH
Arabidopsis Description
TOC120Translocase of chloroplast 120, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9LUS2]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.