Subcellular Localization
min:
: max
Winner_takes_all: plastid, cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- plastid 3
- cytosol 2
- mitochondrion 1
PPI
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT3G46740.1 | CDY25541 | AT1G63900.1 | 23118188 |
| AT3G46740.1 | CDY34384 | AT1G63900.1 | 23118188 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX86093 | Canola | cytosol | 83.98 | 100.0 |
| CDX82997 | Canola | cytosol | 81.43 | 96.96 |
| AT3G46740.1 | Thale cress | plastid | 92.46 | 83.99 |
| VIT_06s0004g05150.t01 | Wine grape | plastid | 83.71 | 76.98 |
| CDX81332 | Canola | mitochondrion | 35.53 | 76.74 |
| KRH10219 | Soybean | plastid | 81.29 | 76.07 |
| KRH23106 | Soybean | endoplasmic reticulum | 81.29 | 75.5 |
| Solyc06g076360.2.1 | Tomato | plastid | 81.83 | 74.88 |
| PGSC0003DMT400078190 | Potato | plastid | 81.56 | 72.31 |
| HORVU4Hr1G022900.2 | Barley | mitochondrion | 37.42 | 69.85 |
| CDY33023 | Canola | plastid | 72.41 | 67.84 |
| CDX80294 | Canola | plastid | 72.54 | 66.63 |
| TraesCS4D01G119300.1 | Wheat | cytosol | 54.1 | 66.56 |
| CDX70592 | Canola | cytosol | 7.27 | 64.29 |
| CDX78609 | Canola | extracellular | 12.92 | 64.0 |
| TraesCS4D01G209900.1 | Wheat | plastid | 68.91 | 63.37 |
| TraesCS4A01G095300.1 | Wheat | golgi, plastid | 68.91 | 63.29 |
| HORVU4Hr1G060190.1 | Barley | plastid | 69.04 | 63.26 |
| TraesCS4B01G209200.1 | Wheat | plastid, unclear | 68.91 | 63.21 |
| Zm00001d028586_P001 | Maize | plastid | 68.24 | 59.51 |
| EER95112 | Sorghum | plastid | 67.97 | 59.41 |
| Zm00001d047828_P001 | Maize | plasma membrane | 67.97 | 59.2 |
| TraesCS4A01G194000.1 | Wheat | plastid | 59.76 | 58.58 |
| Bra018196.1-P | Field mustard | plastid | 93.54 | 57.87 |
| KXG36538 | Sorghum | nucleus | 59.08 | 55.22 |
| CDX68401 | Canola | cytosol | 81.7 | 51.84 |
| CDY55302 | Canola | cytosol, peroxisome | 9.02 | 26.17 |
| CDX92514 | Canola | cytosol | 12.11 | 23.14 |
| CDX87938 | Canola | cytosol | 10.36 | 21.57 |
| CDY58968 | Canola | nucleus, plastid | 17.5 | 17.78 |
| CDX92515 | Canola | nucleus, plastid | 8.88 | 13.81 |
| GSMUA_Achr9P03850_001 | Banana | nucleus, peroxisome, plastid | 4.31 | 13.73 |
Protein Annotations
| Gene3D:2.40.160.50 | MapMan:23.1.2.1 | Gene3D:3.10.20.310 | GO:A0A078EE65 | InterPro:Bac_surfAg_D15 | EnsemblPlants:CDX99099 |
| ProteinID:CDX99099 | ProteinID:CDX99099.1 | GO:GO:0003674 | GO:GO:0005215 | GO:GO:0005575 | GO:GO:0006810 |
| GO:GO:0006886 | GO:GO:0008150 | GO:GO:0015450 | GO:GO:0016020 | GO:GO:0019867 | EnsemblPlantsGene:GSBRNA2T00107247001 |
| InterPro:IAP75 | PFAM:PF01103 | PANTHER:PTHR12815 | PANTHER:PTHR12815:SF18 | TIGRFAMs:TIGR00992 | UniParc:UPI0004EE62BB |
| SEG:seg | : | : | : | : | : |
Description
BnaA06g17900D
Coordinates
chrLK031908:+:348580..352000
Molecular Weight (calculated)
81319.4 Da
IEP (calculated)
7.308
GRAVY (calculated)
-0.391
Length
743 amino acids
Sequence
(BLAST)
(BLAST)
001: MAAFSVNGQL IPAAATSSTT PNSIYPRGGG GGDGNFGGFG GGGGGGDGND GGFWGKLFSP APAVADEEQS PDWDSHGLPG NIVVQLNKLS GFKKYKVSDI
101: VFFDRRRQTS IGTEDSFFEM VSIRPGGVYT KAQLQKELET LATCGMFEKV DLEGKTKPDG TLGVTISFAE STWQSADRFR CINVGLMVQS KPIEMDTDMT
201: DKEKLEYYRS LEKDYKRRID RARPCLLPAP VYGEVMQMLR DQGKVSARLL QKIRDRVQKW YHDEGYACAQ VVNFGNLNTK EVVCEVVEGD ITQLVIQYQD
301: KLGNVVEGNT QVPVVRRELP KQLRQGYVFN IEAGKQALRN INSLGLFSNI EVNPRPDEKN EGGIIVEIKL KELEQKSAEV STEWSIVPGR GGAPTLASFQ
401: PGGSVTFEHR NIQGLNRSLM GSVTTSNFLN PQDDLSFKME YVHPYLDGVY NPRNRTFKTS CFNSRKLSPV FTGGPGVEEV PPIWVDRAGV KANITENFTR
501: QSKFTYGLVM EEITTRDESS HIAANGQRLL PSGGISADGP PTTLSGTGID RMAFLQANIT RDNTKFVNGA VVGERNVFQV DQGLGIGSKF PFFNRHQLTL
601: TRFIQLQQVE EGAGKPPPPV LVLHGHYGGC VGDLPSYDAF VLGGPYSVRG YNMGELGAAR NILELGAEIR VPVKNTHVYA FAEHGNDLGS SKDVKGNPTA
701: VYRRMGQGSS YGVGVKLGLV RAEYAVDHNN GTGALFFRFG ERY
101: VFFDRRRQTS IGTEDSFFEM VSIRPGGVYT KAQLQKELET LATCGMFEKV DLEGKTKPDG TLGVTISFAE STWQSADRFR CINVGLMVQS KPIEMDTDMT
201: DKEKLEYYRS LEKDYKRRID RARPCLLPAP VYGEVMQMLR DQGKVSARLL QKIRDRVQKW YHDEGYACAQ VVNFGNLNTK EVVCEVVEGD ITQLVIQYQD
301: KLGNVVEGNT QVPVVRRELP KQLRQGYVFN IEAGKQALRN INSLGLFSNI EVNPRPDEKN EGGIIVEIKL KELEQKSAEV STEWSIVPGR GGAPTLASFQ
401: PGGSVTFEHR NIQGLNRSLM GSVTTSNFLN PQDDLSFKME YVHPYLDGVY NPRNRTFKTS CFNSRKLSPV FTGGPGVEEV PPIWVDRAGV KANITENFTR
501: QSKFTYGLVM EEITTRDESS HIAANGQRLL PSGGISADGP PTTLSGTGID RMAFLQANIT RDNTKFVNGA VVGERNVFQV DQGLGIGSKF PFFNRHQLTL
601: TRFIQLQQVE EGAGKPPPPV LVLHGHYGGC VGDLPSYDAF VLGGPYSVRG YNMGELGAAR NILELGAEIR VPVKNTHVYA FAEHGNDLGS SKDVKGNPTA
701: VYRRMGQGSS YGVGVKLGLV RAEYAVDHNN GTGALFFRFG ERY
001: MAAFSVNGQL IPTATSSTAS TSLSSRRKFL SPSSSRLPRI STQSPRVPSI KCSKSLPNRD TETSSKDSLL KNLAKPLAVA SVSSAASFFL FRISNLPSVL
101: TGGGGGGDGN FGGFGGGGGG GDGNDGGFWG KLFSPSPAVA DEEQSPDWDS HGLPANIVVQ LNKLSGFKKY KVSDIMFFDR RRQTTIGTED SFFEMVSIRP
201: GGVYTKAQLQ KELETLATCG MFEKVDLEGK TKPDGTLGVT ISFAESTWQS ADRFRCINVG LMVQSKPIEM DSDMTDKEKL EYYRSLEKDY KRRIDRARPC
301: LLPAPVYGEV MQMLRDQGKV SARLLQRIRD RVQKWYHDEG YACAQVVNFG NLNTKEVVCE VVEGDITQLV IQFQDKLGNV VEGNTQVPVV RRELPKQLRQ
401: GYVFNIEAGK KALSNINSLG LFSNIEVNPR PDEKNEGGII VEIKLKELEQ KSAEVSTEWS IVPGRGGAPT LASFQPGGSV TFEHRNLQGL NRSLMGSVTT
501: SNFLNPQDDL SFKLEYVHPY LDGVYNPRNR TFKTSCFNSR KLSPVFTGGP GVEEVPPIWV DRAGVKANIT ENFTRQSKFT YGLVMEEITT RDESSHIAAN
601: GQRLLPSGGI SADGPPTTLS GTGVDRMAFL QANITRDNTK FVNGAVVGQR TVFQVDQGLG IGSKFPFFNR HQLTMTKFIQ LREVEQGAGK SPPPVLVLHG
701: HYGGCVGDLP SYDAFVLGGP YSVRGYNMGE LGAARNIAEV GAEIRIPVKN THVYAFVEHG NDLGSSKDVK GNPTAVYRRT GQGSSYGAGV KLGLVRAEYA
801: VDHNNGTGAL FFRFGERY
101: TGGGGGGDGN FGGFGGGGGG GDGNDGGFWG KLFSPSPAVA DEEQSPDWDS HGLPANIVVQ LNKLSGFKKY KVSDIMFFDR RRQTTIGTED SFFEMVSIRP
201: GGVYTKAQLQ KELETLATCG MFEKVDLEGK TKPDGTLGVT ISFAESTWQS ADRFRCINVG LMVQSKPIEM DSDMTDKEKL EYYRSLEKDY KRRIDRARPC
301: LLPAPVYGEV MQMLRDQGKV SARLLQRIRD RVQKWYHDEG YACAQVVNFG NLNTKEVVCE VVEGDITQLV IQFQDKLGNV VEGNTQVPVV RRELPKQLRQ
401: GYVFNIEAGK KALSNINSLG LFSNIEVNPR PDEKNEGGII VEIKLKELEQ KSAEVSTEWS IVPGRGGAPT LASFQPGGSV TFEHRNLQGL NRSLMGSVTT
501: SNFLNPQDDL SFKLEYVHPY LDGVYNPRNR TFKTSCFNSR KLSPVFTGGP GVEEVPPIWV DRAGVKANIT ENFTRQSKFT YGLVMEEITT RDESSHIAAN
601: GQRLLPSGGI SADGPPTTLS GTGVDRMAFL QANITRDNTK FVNGAVVGQR TVFQVDQGLG IGSKFPFFNR HQLTMTKFIQ LREVEQGAGK SPPPVLVLHG
701: HYGGCVGDLP SYDAFVLGGP YSVRGYNMGE LGAARNIAEV GAEIRIPVKN THVYAFVEHG NDLGSSKDVK GNPTAVYRRT GQGSSYGAGV KLGLVRAEYA
801: VDHNNGTGAL FFRFGERY
Arabidopsis Description
TOC75-3Protein TOC75-3, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9STE8]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.