Factsheet for Bra018196.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 9
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	nucleus, plastid
BaCelLo:	plastid
ChloroP:	plastid
EpiLoc:	nucleus
iPSORT:	plastid
MultiLoc:	plastid
Predotar:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	plastid

PPI

Inferred distinct locusB in Crop

locusB	locations
Bra027667.1-P

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G46740.1	Bra027667.1-P	AT1G63900.1	23118188

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra018197.1-P	Field mustard	plastid	66.78	97.45
CDX99099	Canola	cytosol, plastid	57.87	93.54
Bra033806.1-P	Field mustard	plastid	60.2	89.04
AT3G46740.1	Thale cress	plastid	60.53	88.88
VIT_06s0004g05150.t01	Wine grape	plastid	52.04	77.35
KRH10219	Soybean	plastid	50.79	76.83
KRH23106	Soybean	endoplasmic reticulum	50.79	76.25
Solyc06g076360.2.1	Tomato	plastid	50.37	74.51
PGSC0003DMT400078190	Potato	plastid	50.29	72.08
HORVU4Hr1G022900.2	Barley	mitochondrion	22.56	68.09
Bra002581.1-P	Field mustard	plastid	44.88	67.97
TraesCS4D01G119300.1	Wheat	cytosol	32.64	64.9
HORVU4Hr1G060190.1	Barley	plastid	42.96	63.63
TraesCS4B01G209200.1	Wheat	plastid, unclear	42.88	63.58
TraesCS4A01G095300.1	Wheat	golgi, plastid	42.8	63.54
TraesCS4D01G209900.1	Wheat	plastid	42.71	63.49
EER95112	Sorghum	plastid	41.63	58.82
Zm00001d028586_P001	Maize	plastid	41.72	58.8
Zm00001d047828_P001	Maize	plasma membrane	41.72	58.73
TraesCS4A01G194000.1	Wheat	plastid	36.22	57.39
KXG36538	Sorghum	nucleus	36.3	54.84
Bra006282.1-P	Field mustard	plasma membrane	9.49	49.35
Bra034992.1-P	Field mustard	cytosol	6.08	20.05
Bra018198.1-P	Field mustard	cytosol	5.0	17.34
Bra002250.1-P	Field mustard	cytosol, plastid	10.32	16.87
GSMUA_Achr9P03850_001	Banana	nucleus, peroxisome, plastid	2.58	13.3

Protein Annotations

Gene3D:2.40.160.50	MapMan:23.1.2.1	Gene3D:3.10.20.310	Gene3D:3.40.50.300	Gene3D:3.80.10.10	InterPro:Bac_surfAg_D15
EnsemblPlantsGene:Bra018196	EnsemblPlants:Bra018196.1	EnsemblPlants:Bra018196.1-P	GO:GO:0000166	GO:GO:0003674	GO:GO:0005215
GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0006810	GO:GO:0006886
GO:GO:0008150	GO:GO:0015450	GO:GO:0016020	GO:GO:0019867	GO:GO:0043531	GO:GO:0071806
InterPro:IAP75	InterPro:IPR032675	InterPro:LRR_dom_sf	UniProt:M4DNV8	InterPro:NB-ARC	InterPro:P-loop_NTPase
PFAM:PF00931	PFAM:PF01103	PANTHER:PTHR12815	PANTHER:PTHR12815:SF18	InterPro:RX-like_CC	SUPFAM:SSF52058
SUPFAM:SSF52540	TIGRFAMs:TIGR00992	UniParc:UPI000253F4EF	SEG:seg	:	:

Description

AT3G46740 (E=0.0) TOC75-III | TOC75-III (TRANSLOCON AT THE OUTER ENVELOPE MEMBRANE OF CHLOROPLASTS 75-III); P-P-bond-hydrolysis-driven protein transmembrane transporter

Coordinates

chrA06:+:10965034..10970729

Molecular Weight (calculated)

133207.0 Da

IEP (calculated)

9.025

GRAVY (calculated)

-0.363

Length

1201 amino acids

Sequence
(BLAST)

0001: MAAFSVNGQL IPAAATSSTT PNSIYPRRKF LAPSSSRLPR ISSPSPRVPS IKCSSSSSRD TEPSPSPKDS LLKSLSKPLA VASVSSAASF FLFRISNLPS
0101: ILSSGGGGGG GGDGNFGGFG GGGGGGDGND GGFWGKLFSP APAVADEEQS PDWDSHGLPG NIVVQLNKLS GFKKYKVSDI VFFDRRRQTS IGTEDSFFEM
0201: VSIRPGGVYT KAQLQKELET LATCGMFEKV DLEGKTKPDG TLGVTISFAE STWQSADRFR CINVGLMVQS KPIEMDTDMT DKEKLEYYRS LEKDYKRRID
0301: RARPCLLPAP VYGEVMQMLR DQGKVSARLL QKIRDRVQKW YHDEGYACAQ VVNFGNLNTK EVVCEVVEGD ITQLVIQYQD KLGNVVEGNT QVPVVRRELP
0401: KQLRQGYVFN IEAGKQALRN INSLGLFSNI EVNPRPDEKN EGGIIVEIKL KELEQKSAEV STEWSIVPGR GGAPTLASFQ PGGSVTFEHR NIQGLNRSLM
0501: GSVTTSNFLN PQDDLSFKME YVHPYLDGVY NPRNRTFKTS CFNSRKLSPV FTGGPGVDEV PPIWVDRAGV KANITENFTR QSKFTYGLVM EEITTRDESS
0601: HIAANGQRLL PSGGISADGP PTTLSGTGID RMAFLQANIT RDNTKFVNGA VVGERNVFQV DQGLGIGSKF PFFNRHQLTL TRFIQLQQVE EGAGKPPPPV
0701: LVLHGHYGGC VGDLPSYDAF VLGGPYSVRG YNMGELGAAR NILELGAEIR VPVKNTHVYA FAEHGNDLGS SDRFRCITTA VYRRMGQGSS YGVGVKLGLV
0801: RAEYAVDHNN GTAREKEDEV SKEWTKLVLD IAYDVEDVLD CYNLKVVQRS QRRGLMRLIK IFGETMDSYR ITDDMGSLKR RISDLTRKRE TYGIGNFNEP
0901: PQGGGNISSL KMSMRGLGKT AIARKLYNSG DVKRRFEYRT WTYVSQEYKT RDMLVRIIRS LGIAIELELK MFSEEELEDY LDDILDGQRY LVVVVAESVE
1001: EKVYAHKLRI HDLLRDVAIK KSKEINFVHV YNGQHSSTTC RREVVHYLIN NNDLCDRHVN KRMRSFLFFG EKKGMLGVFV QTITLNLKLL RVLNLGGLLF
1101: LCKGYVPLSL PDAIGDLIHL RYLGVADAGR RNIPTFISNL QFLQTLDASG FNYFKGTTDL KIAETGRSGS ERMRRVGSAD EYQRTRFSSA EEALIDYSKI
1201: G

Best Arabidopsis Sequence Match ( AT3G46740.1 )
(BLAST)

001: MAAFSVNGQL IPTATSSTAS TSLSSRRKFL SPSSSRLPRI STQSPRVPSI KCSKSLPNRD TETSSKDSLL KNLAKPLAVA SVSSAASFFL FRISNLPSVL
101: TGGGGGGDGN FGGFGGGGGG GDGNDGGFWG KLFSPSPAVA DEEQSPDWDS HGLPANIVVQ LNKLSGFKKY KVSDIMFFDR RRQTTIGTED SFFEMVSIRP
201: GGVYTKAQLQ KELETLATCG MFEKVDLEGK TKPDGTLGVT ISFAESTWQS ADRFRCINVG LMVQSKPIEM DSDMTDKEKL EYYRSLEKDY KRRIDRARPC
301: LLPAPVYGEV MQMLRDQGKV SARLLQRIRD RVQKWYHDEG YACAQVVNFG NLNTKEVVCE VVEGDITQLV IQFQDKLGNV VEGNTQVPVV RRELPKQLRQ
401: GYVFNIEAGK KALSNINSLG LFSNIEVNPR PDEKNEGGII VEIKLKELEQ KSAEVSTEWS IVPGRGGAPT LASFQPGGSV TFEHRNLQGL NRSLMGSVTT
501: SNFLNPQDDL SFKLEYVHPY LDGVYNPRNR TFKTSCFNSR KLSPVFTGGP GVEEVPPIWV DRAGVKANIT ENFTRQSKFT YGLVMEEITT RDESSHIAAN
601: GQRLLPSGGI SADGPPTTLS GTGVDRMAFL QANITRDNTK FVNGAVVGQR TVFQVDQGLG IGSKFPFFNR HQLTMTKFIQ LREVEQGAGK SPPPVLVLHG
701: HYGGCVGDLP SYDAFVLGGP YSVRGYNMGE LGAARNIAEV GAEIRIPVKN THVYAFVEHG NDLGSSKDVK GNPTAVYRRT GQGSSYGAGV KLGLVRAEYA
801: VDHNNGTGAL FFRFGERY

Arabidopsis Description

TOC75-3Protein TOC75-3, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9STE8]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.