Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- plastid 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| EER99814 |
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT3G46740.1 | EER99814 | AT1G63900.1 | 23118188 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| HORVU4Hr1G022900.2 | Barley | mitochondrion | 38.49 | 76.88 |
| TraesCS4D01G119300.1 | Wheat | cytosol | 56.23 | 74.01 |
| GSMUA_Achr9P03840_001 | Banana | cytosol | 28.93 | 73.48 |
| Os11t0116500-01 | Rice | cytosol | 60.75 | 73.18 |
| GSMUA_Achr10P... | Banana | cytosol | 49.31 | 70.89 |
| CDX86093 | Canola | cytosol | 51.7 | 65.87 |
| CDX82997 | Canola | cytosol | 51.2 | 65.22 |
| TraesCS4A01G194000.1 | Wheat | plastid | 61.38 | 64.38 |
| EER95112 | Sorghum | plastid | 65.79 | 61.53 |
| CDX99099 | Canola | cytosol, plastid | 55.22 | 59.08 |
| GSMUA_Achr9P03830_001 | Banana | cytosol | 10.31 | 58.16 |
| GSMUA_Achr6P15190_001 | Banana | mitochondrion | 52.08 | 56.79 |
| AT1G35860.1 | Thale cress | nucleus | 27.92 | 55.64 |
| VIT_06s0004g05150.t01 | Wine grape | plastid | 56.23 | 55.32 |
| AT4G09080.2 | Thale cress | golgi | 28.3 | 55.28 |
| KRH10219 | Soybean | plastid | 54.72 | 54.79 |
| KRH23106 | Soybean | endoplasmic reticulum | 54.97 | 54.62 |
| Bra033806.1-P | Field mustard | plastid | 55.6 | 54.43 |
| AT3G46740.1 | Thale cress | plastid | 55.72 | 54.16 |
| CDX81332 | Canola | mitochondrion | 23.4 | 54.07 |
| Bra018197.1-P | Field mustard | plastid | 55.72 | 53.83 |
| Solyc06g076360.2.1 | Tomato | plastid | 54.84 | 53.69 |
| CDY33023 | Canola | plastid | 52.45 | 52.59 |
| CDX80294 | Canola | plastid | 53.08 | 52.16 |
| PGSC0003DMT400078190 | Potato | plastid | 54.72 | 51.91 |
| Bra002581.1-P | Field mustard | plastid | 51.7 | 51.83 |
| CDX70592 | Canola | cytosol | 4.91 | 46.43 |
| CDX78609 | Canola | extracellular | 8.18 | 43.33 |
| Bra018196.1-P | Field mustard | plastid | 54.84 | 36.3 |
| CDX68401 | Canola | cytosol | 51.2 | 34.76 |
| Bra006282.1-P | Field mustard | plasma membrane | 9.94 | 34.2 |
| EES18465 | Sorghum | cytosol | 11.07 | 21.95 |
| EES06452 | Sorghum | mitochondrion | 15.47 | 18.66 |
| GSMUA_Achr9P03850_001 | Banana | nucleus, peroxisome, plastid | 4.03 | 13.73 |
Protein Annotations
| EnsemblPlants:KXG36538 | EnsemblPlantsGene:SORBI_3002G349900 | Gene3D:2.40.160.50 | Gene3D:3.10.20.310 | GO:GO:0005575 | GO:GO:0016020 |
| GO:GO:0019867 | InterPro:Bac_surfAg_D15 | PANTHER:PTHR12815 | PANTHER:PTHR12815:SF14 | PFAM:PF01103 | ProteinID:KXG36538 |
| ProteinID:KXG36538.1 | SEG:seg | UniParc:UPI00081ABDB0 | UniProt:A0A1B6QF42 | MapMan:23.1.2.1 | : |
Description
hypothetical protein
Coordinates
chr2:+:71432396..71437341
Molecular Weight (calculated)
86744.8 Da
IEP (calculated)
9.431
GRAVY (calculated)
-0.475
Length
795 amino acids
Sequence
(BLAST)
(BLAST)
001: MWFNSRSEPN ADADPRPQGS CNRALASAIT AATSSSSCDL GSGWGSRGGG GGFLSWIFSA GVARAHEHEG KPQAGDWDAH GLPVTRTPVT LSRLDGRKRY
101: KVSELNFLDR RARTTEASAG EKEKTSTPLF DDMTTLRSGG VYTRLQLHDE LQTMTSSGMF EQVSLQGKPK PDGTLALTVT YAESVWPGAV KRLKFVNVGL
201: MPPLGDGPDD DMTAREKMDY FRRQERDYKQ RVRRAKQCIL PQSVRQEVLG MVKKQGKLTA GLLRRIRDHV EKWYHDEGFV FAQVQNFGNL DSDEIVLEVA
301: EGDITKVEYQ FHDKLDNIIE GNTSIAIIDR ELPQQLGPGH IYNLGAGKQA LQSINSLSLF SNIELTPRPD ETKQGGIVVN IKLKEHEPKS AQVTTEWSIV
401: PGHQGLPTLA SIQPGGTVSF EHRNISGLNR SLVGSVTSNN LLNPQGDLSF RLEYAHPYLD GVENRSRNRT FKASCFNSKK LSPVFVAGPN MDEAPPIWID
501: RVGFKANITE NLTRQSKFTY GLVVEEITTR DEDNNICTHG ARVLPGGALS MDGPPTTFSG TGVDRMAFLQ ANITRDNTEF VNGATIGNRC IFQLDQGLGI
601: GSKKPFFNRH QLTVTKFINL NKLLNKQKKG AGKPPPAVLN QQEKGGGKPP PAVLSKQEKG AGKPPPAVLA LHGRYAGCVG DLPSYDAFAL GGPHSVRGYG
701: MGELGASRNL LEVAAEVRVP ITVKNRQAQV YAFAEHGTDL GSSKDVKGNP TEFFRRAGHG SSYGVGVKLG AVRAEYAVDH NAGTGAFFLR FGERF
101: KVSELNFLDR RARTTEASAG EKEKTSTPLF DDMTTLRSGG VYTRLQLHDE LQTMTSSGMF EQVSLQGKPK PDGTLALTVT YAESVWPGAV KRLKFVNVGL
201: MPPLGDGPDD DMTAREKMDY FRRQERDYKQ RVRRAKQCIL PQSVRQEVLG MVKKQGKLTA GLLRRIRDHV EKWYHDEGFV FAQVQNFGNL DSDEIVLEVA
301: EGDITKVEYQ FHDKLDNIIE GNTSIAIIDR ELPQQLGPGH IYNLGAGKQA LQSINSLSLF SNIELTPRPD ETKQGGIVVN IKLKEHEPKS AQVTTEWSIV
401: PGHQGLPTLA SIQPGGTVSF EHRNISGLNR SLVGSVTSNN LLNPQGDLSF RLEYAHPYLD GVENRSRNRT FKASCFNSKK LSPVFVAGPN MDEAPPIWID
501: RVGFKANITE NLTRQSKFTY GLVVEEITTR DEDNNICTHG ARVLPGGALS MDGPPTTFSG TGVDRMAFLQ ANITRDNTEF VNGATIGNRC IFQLDQGLGI
601: GSKKPFFNRH QLTVTKFINL NKLLNKQKKG AGKPPPAVLN QQEKGGGKPP PAVLSKQEKG AGKPPPAVLA LHGRYAGCVG DLPSYDAFAL GGPHSVRGYG
701: MGELGASRNL LEVAAEVRVP ITVKNRQAQV YAFAEHGTDL GSSKDVKGNP TEFFRRAGHG SSYGVGVKLG AVRAEYAVDH NAGTGAFFLR FGERF
001: MAAFSVNGQL IPTATSSTAS TSLSSRRKFL SPSSSRLPRI STQSPRVPSI KCSKSLPNRD TETSSKDSLL KNLAKPLAVA SVSSAASFFL FRISNLPSVL
101: TGGGGGGDGN FGGFGGGGGG GDGNDGGFWG KLFSPSPAVA DEEQSPDWDS HGLPANIVVQ LNKLSGFKKY KVSDIMFFDR RRQTTIGTED SFFEMVSIRP
201: GGVYTKAQLQ KELETLATCG MFEKVDLEGK TKPDGTLGVT ISFAESTWQS ADRFRCINVG LMVQSKPIEM DSDMTDKEKL EYYRSLEKDY KRRIDRARPC
301: LLPAPVYGEV MQMLRDQGKV SARLLQRIRD RVQKWYHDEG YACAQVVNFG NLNTKEVVCE VVEGDITQLV IQFQDKLGNV VEGNTQVPVV RRELPKQLRQ
401: GYVFNIEAGK KALSNINSLG LFSNIEVNPR PDEKNEGGII VEIKLKELEQ KSAEVSTEWS IVPGRGGAPT LASFQPGGSV TFEHRNLQGL NRSLMGSVTT
501: SNFLNPQDDL SFKLEYVHPY LDGVYNPRNR TFKTSCFNSR KLSPVFTGGP GVEEVPPIWV DRAGVKANIT ENFTRQSKFT YGLVMEEITT RDESSHIAAN
601: GQRLLPSGGI SADGPPTTLS GTGVDRMAFL QANITRDNTK FVNGAVVGQR TVFQVDQGLG IGSKFPFFNR HQLTMTKFIQ LREVEQGAGK SPPPVLVLHG
701: HYGGCVGDLP SYDAFVLGGP YSVRGYNMGE LGAARNIAEV GAEIRIPVKN THVYAFVEHG NDLGSSKDVK GNPTAVYRRT GQGSSYGAGV KLGLVRAEYA
801: VDHNNGTGAL FFRFGERY
101: TGGGGGGDGN FGGFGGGGGG GDGNDGGFWG KLFSPSPAVA DEEQSPDWDS HGLPANIVVQ LNKLSGFKKY KVSDIMFFDR RRQTTIGTED SFFEMVSIRP
201: GGVYTKAQLQ KELETLATCG MFEKVDLEGK TKPDGTLGVT ISFAESTWQS ADRFRCINVG LMVQSKPIEM DSDMTDKEKL EYYRSLEKDY KRRIDRARPC
301: LLPAPVYGEV MQMLRDQGKV SARLLQRIRD RVQKWYHDEG YACAQVVNFG NLNTKEVVCE VVEGDITQLV IQFQDKLGNV VEGNTQVPVV RRELPKQLRQ
401: GYVFNIEAGK KALSNINSLG LFSNIEVNPR PDEKNEGGII VEIKLKELEQ KSAEVSTEWS IVPGRGGAPT LASFQPGGSV TFEHRNLQGL NRSLMGSVTT
501: SNFLNPQDDL SFKLEYVHPY LDGVYNPRNR TFKTSCFNSR KLSPVFTGGP GVEEVPPIWV DRAGVKANIT ENFTRQSKFT YGLVMEEITT RDESSHIAAN
601: GQRLLPSGGI SADGPPTTLS GTGVDRMAFL QANITRDNTK FVNGAVVGQR TVFQVDQGLG IGSKFPFFNR HQLTMTKFIQ LREVEQGAGK SPPPVLVLHG
701: HYGGCVGDLP SYDAFVLGGP YSVRGYNMGE LGAARNIAEV GAEIRIPVKN THVYAFVEHG NDLGSSKDVK GNPTAVYRRT GQGSSYGAGV KLGLVRAEYA
801: VDHNNGTGAL FFRFGERY
Arabidopsis Description
TOC75-3Protein TOC75-3, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9STE8]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.