Factsheet for GSMUA_Achr6P15190_001

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 4
cytosol 1
mitochondrion 3

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr10P...	Banana	cytosol	67.9	89.51
GSMUA_Achr9P03840_001	Banana	cytosol	36.9	85.94
GSMUA_Achr9P03830_001	Banana	cytosol	16.19	83.69
HORVU4Hr1G022900.2	Barley	mitochondrion	37.86	69.35
TraesCS4D01G119300.1	Wheat	cytosol	49.66	59.93
CDX70592	Canola	cytosol	6.86	59.52
TraesCS4A01G095300.1	Wheat	golgi, plastid	65.98	59.46
TraesCS4D01G209900.1	Wheat	plastid	65.84	59.41
TraesCS4B01G209200.1	Wheat	plastid, unclear	65.98	59.38
HORVU4Hr1G060190.1	Barley	plastid	65.98	59.31
EER95112	Sorghum	plastid	64.61	55.41
CDX78609	Canola	extracellular	11.39	55.33
Zm00001d028586_P001	Maize	plastid	64.33	55.05
Zm00001d047828_P001	Maize	plasma membrane	64.06	54.75
TraesCS4A01G194000.1	Wheat	plastid	55.97	53.83
KXG36538	Sorghum	nucleus	56.79	52.08
Bra006282.1-P	Field mustard	plasma membrane	13.44	42.42
Os12t0115950-00	Rice	nucleus, plasma membrane	13.58	40.74
GSMUA_Achr9P10370_001	Banana	cytosol	11.39	23.06
GSMUA_Achr6P31130_001	Banana	cytosol	11.11	22.5
GSMUA_Achr9P19020_001	Banana	plastid	16.19	17.72
GSMUA_Achr9P03850_001	Banana	nucleus, peroxisome, plastid	4.53	14.16

Protein Annotations

EnsemblPlants:GSMUA_Achr6P15190_001	EnsemblPlants:GSMUA_Achr6T15190_001	EnsemblPlantsGene:GSMUA_Achr6G15190_001	Gene3D:2.40.160.50	Gene3D:3.10.20.310	GO:GO:0005575
GO:GO:0016020	GO:GO:0016021	GO:GO:0019867	InterPro:Bac_surfAg_D15	PANTHER:PTHR12815	PANTHER:PTHR12815:SF18
PFAM:PF01103	SEG:seg	TMHMM:TMhelix	UniParc:UPI000294A31A	UniProt:M0T767	MapMan:23.1.2.1

Description

Protein TOC75-3, chloroplastic [Source:GMGC_GENE;Acc:GSMUA_Achr6G15190_001]

Coordinates

chr6:+:10116168..10121024

Molecular Weight (calculated)

79710.4 Da

IEP (calculated)

9.648

GRAVY (calculated)

-0.266

Length

729 amino acids

Sequence
(BLAST)

001: MPNDGTIVPT TIIVRARKKS LAAAPWTRKH IPYGRTIGPT TIVIRVCKKY IAPFSASVVS VAAAAAGGFI LISSFPPSPP PIDGGGGGGG WFRGGGGDGG
101: GGFWSNLFSP FVALAKEEGG GGHGWDPHGL PANIVVQLNK LSGLKRYKIS EILFFDRRRS TTVAGTNDSF FEMVSLRNGG VYTKAQLQKE VENLASSGMF
201: EKRRIDRSRP CLLPVTVQRE VLQMLRERGK VSARLLQRIR DRVQKWYHDE GYACAQVVNF GNLNTREVVC EVVEGDITQL NIQFLDKLGN LCEGNTQLAV
301: IRRELPRQLR SGHVFNIEAG KQALRNINSL SLFSNIEVNP RPDEKKEGGI IVEIKLREMD QKSAEVSIEW SLVPGRHGQP TLASIQPGGT ISFEHRNIKG
401: LNRSIVGSVT SSNLLNPQDD LSFKLDYVHP YLDGVTNPRN RTFRVSCFNS RKLSPVFTGG PGADEVPPVW IDRAGFKANV TENYTRQSKF TYGLVMEEIT
501: PRDETSSICT HGARALPSGG LSMDGPPTTL SGIGVDRMAF AQANVTRDNT KFLNGAIVGE RDVFQVDQGL GIGSNFPFFN RHQLTLTRFI PLKQVEEGID
601: KSAPPVLVLH GHYGSCVGDL ASYDAFTLGG PYSVRGYNMG ELGACRNILE LAAELRIPIK KTHVYLFAEH GNDLGSSKDV KGNPTEFFRR AGHGSSYGAG
701: LKLGMVRAEY AVDHNTDTGA VFLRFGERF

Best Arabidopsis Sequence Match ( AT3G46740.1 )
(BLAST)

001: MAAFSVNGQL IPTATSSTAS TSLSSRRKFL SPSSSRLPRI STQSPRVPSI KCSKSLPNRD TETSSKDSLL KNLAKPLAVA SVSSAASFFL FRISNLPSVL
101: TGGGGGGDGN FGGFGGGGGG GDGNDGGFWG KLFSPSPAVA DEEQSPDWDS HGLPANIVVQ LNKLSGFKKY KVSDIMFFDR RRQTTIGTED SFFEMVSIRP
201: GGVYTKAQLQ KELETLATCG MFEKVDLEGK TKPDGTLGVT ISFAESTWQS ADRFRCINVG LMVQSKPIEM DSDMTDKEKL EYYRSLEKDY KRRIDRARPC
301: LLPAPVYGEV MQMLRDQGKV SARLLQRIRD RVQKWYHDEG YACAQVVNFG NLNTKEVVCE VVEGDITQLV IQFQDKLGNV VEGNTQVPVV RRELPKQLRQ
401: GYVFNIEAGK KALSNINSLG LFSNIEVNPR PDEKNEGGII VEIKLKELEQ KSAEVSTEWS IVPGRGGAPT LASFQPGGSV TFEHRNLQGL NRSLMGSVTT
501: SNFLNPQDDL SFKLEYVHPY LDGVYNPRNR TFKTSCFNSR KLSPVFTGGP GVEEVPPIWV DRAGVKANIT ENFTRQSKFT YGLVMEEITT RDESSHIAAN
601: GQRLLPSGGI SADGPPTTLS GTGVDRMAFL QANITRDNTK FVNGAVVGQR TVFQVDQGLG IGSKFPFFNR HQLTMTKFIQ LREVEQGAGK SPPPVLVLHG
701: HYGGCVGDLP SYDAFVLGGP YSVRGYNMGE LGAARNIAEV GAEIRIPVKN THVYAFVEHG NDLGSSKDVK GNPTAVYRRT GQGSSYGAGV KLGLVRAEYA
801: VDHNNGTGAL FFRFGERY

Arabidopsis Description

TOC75-3Protein TOC75-3, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9STE8]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.