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Maize
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Maize
Subcellular Localization
min:
: max

 
Winner_takes_all: plastid

Predictor Summary:
  • plastid 8
Predictors GFP MS/MS Papers
Winner Takes All:plastid
Any Predictor:plastid
ChloroP:plastid
iPSORT:plastid
MultiLoc:plastid
Predotar:plastid
PProwler:plastid
TargetP:plastid
WoLF PSORT:plastid
YLoc:plastid
 plastid: 22065420
plastid: 23198870
plasma membrane: 23508561
mitochondrion: 27297264
plasma membrane: 27341663
msms PMID: 27297264 doi
D Dahal, KJ Newton, BP Mooney
Division of Biological Sciences, ‡Department of Biochemistry, and §The Charles W Gehrke Proteomics Center, University of Missouri , Columbia, Missouri 65211, United States.
msms PMID: 23198870 doi
M Huang, G Friso, K Nishimura, X Qu, PD Olinares, W Majeran, Q Sun, KJ van Wijk
Department of Plant Biology, Cornell University, Ithaca, New York 14853, United States.
msms PMID: 27341663 doi
P Voothuluru, JC Anderson, RE Sharp, SC Peck
Bond Life Sciences Center, University of Missouri, Columbia, MO, 65211, USA., Division of Biochemistry, University of Missouri, Columbia, MO, 65211, USA., Division of Plant Sciences, University of Missouri, Columbia, MO, 65211, USA., Interdisciplinary Plant Group, University of Missouri, Columbia, MO, 65211, USA.
msms PMID: 22065420 doi
W Majeran, G Friso, Y Asakura, X Qu, M Huang, L Ponnala, KP Watkins, A Barkan, KJ van Wijk
Department of Plant Biology, Cornell University, Ithaca, New York 14853, USA.
msms PMID: 23508561 doi
Z Zhang, P Voothuluru, M Yamaguchi, RE Sharp, SC Peck
Division of Biochemistry, University of Missouri Columbia, MO, USA ; Christopher S. Bond Life Sciences Center, University of Missouri Columbia, MO, USA ; Interdisciplinary Plant Group, University of Missouri Columbia, MO, USA.
PPI

Inferred distinct locusB in Crop

locusBlocations
Zm00001d007060_P003

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT3G46740.1 Zm00001d007060_P003 AT1G63900.1 23118188
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
EER95112 Sorghum plastid 96.83 97.06
Zm00001d047828_P001 Maize plasma membrane 94.95 94.84
Os03t0271200-01 Rice plastid 81.1 84.58
TraesCS4B01G209200.1 Wheat plastid, unclear 80.16 84.32
HORVU4Hr1G060190.1 Barley plastid 80.16 84.22
TraesCS4A01G095300.1 Wheat golgi, plastid 79.93 84.18
TraesCS4D01G209900.1 Wheat plastid 79.58 83.91
GSMUA_Achr9P03840_001 Banana cytosol 28.87 78.59
GSMUA_Achr10P... Banana cytosol 49.77 76.67
CDX86093 Canola cytosol 53.52 73.08
CDX82997 Canola cytosol 52.82 72.12
GSMUA_Achr9P03830_001 Banana cytosol 11.62 70.21
CDX99099 Canola cytosol, plastid 59.51 68.24
GSMUA_Achr6P15190_001 Banana mitochondrion 55.05 64.33
KRH10219 Soybean plastid 59.74 64.11
VIT_06s0004g05150.t01 Wine grape plastid 60.33 63.61
KRH23106 Soybean endoplasmic reticulum 59.04 62.88
Solyc06g076360.2.1 Tomato plastid 59.74 62.68
Bra033806.1-P Field mustard plastid 59.51 62.44
AT3G46740.1 Thale cress plastid 59.62 62.1
Bra018197.1-P Field mustard plastid 59.98 62.09
PGSC0003DMT400078190 Potato plastid 59.27 60.26
AT1G35860.1 Thale cress nucleus 27.46 58.65
Bra002581.1-P Field mustard plastid 53.76 57.76
CDY33023 Canola plastid 53.52 57.5
CDX70592 Canola cytosol 5.63 57.14
CDX81332 Canola mitochondrion 23.0 56.98
CDX80294 Canola plastid 53.99 56.86
CDX78609 Canola extracellular 9.86 56.0
AT4G09080.2 Thale cress golgi 26.29 55.04
Bra006282.1-P Field mustard plasma membrane 11.85 43.72
Bra018196.1-P Field mustard plastid 58.8 41.72
CDX68401 Canola cytosol 52.82 38.43
Zm00001d000311_P003 Maize cytosol 9.62 22.71
Zm00001d053664_P001 Maize plastid 14.79 19.18
Zm00001d015837_P001 Maize plastid 14.32 18.46
GSMUA_Achr9P03850_001 Banana nucleus, peroxisome, plastid 3.64 13.3
Protein Annotations
EMBL:BT062941EnsemblPlants:Zm00001d028586_P001EnsemblPlants:Zm00001d028586_T001EnsemblPlantsGene:Zm00001d028586EntrezGene:100382028Gene3D:2.40.160.50
Gene3D:3.10.20.310GO:GO:0005575GO:GO:0016020GO:GO:0019867InterPro:Bac_surfAg_D15PANTHER:PTHR12815
PANTHER:PTHR12815:SF14PFAM:PF01103ProteinID:ONL96513.1SEG:segUniParc:UPI0001948E7EUniProt:C0P3S2
MapMan:23.1.2.1:::::
Description
Protein TOC75-3 chloroplastic
Coordinates
chr1:+:40092188..40097197
Molecular Weight (calculated)
91636.6 Da
IEP (calculated)
7.853
GRAVY (calculated)
-0.288
Length
852 amino acids
Sequence
(BLAST)
001: MALASQGITL RSPPAGSGGH SGRRSSSVPA AAAPRGWGQP HAGQALSISP ARYEPAARPP WRGSLAAAIR AAASAGAHHG SDPVPAEPRI ELPAIFTVFS
101: EAAKTGAAFF IASSSAAFLL GSFGGFGGGA GGLFGGGGGG GGWGAGGGGA GGGGGGDFWS WLFSAGAANA DDKSSGDWDA HGLPVNMTVP LTKLSGLKRY
201: KLSELKFFDR AAAGGGAYTG PEDSFFEMVT LQPGGVYTKS QLLKELETLV SCGMFERVDL EVKPKPDNTI GLTVSFVESV WSAAKQFKCI NVGLMSQSGQ
301: VDFDQDMTER EKMDYLRKQE RDYQQRVRGA KPCILPENVR GEVLGMMKKQ EKVSARMLQK IRDHVQKWYH NEGFVCAQVV NFGNLNTNEV VCEVVEGDIT
401: KVEYQFQDKL GNIVEGNTQL QIIDRELPQQ LRPGHIFNIG AGKQALKNIN SLALFSNIEV NPRPDETKEG GIVVEIKLKE LEPKSAEVST EWSIVPGREG
501: RPTLASIQPG GTVSFEHRNI YGLNRSIVGS VTSSNLLNPQ DDLSFKLEYV HPYLDGVDDR SKNRTFKTSC FNTRKLSPVF VAGPNMDEAP PVWIDRVGFK
601: ANITESFTRQ SKFTYGLVVE EITTRDETNT ICTHGSRAMP SGGLSMDGPP TTLSGTGVDR MAFLQANITR DNTEFVNGAI VGDRYIFQLD QGLGIGSKNP
701: FFNRHQLTLT KFINLNKQEK GAGKPLPAVL VLHSHYAGCV GDLPSYDAFA LGGPYSVRGF SNGELGASRN ILELATELRV PIRNTHVYAF AEHGTDLGSS
801: KDVKGNPTEF FRRVGHGSSY GVGVKLGLVR GEYIVDHNAG TGTVFFRFGE RF
Best Arabidopsis Sequence Match ( AT3G46740.1 )
(BLAST)
001: MAAFSVNGQL IPTATSSTAS TSLSSRRKFL SPSSSRLPRI STQSPRVPSI KCSKSLPNRD TETSSKDSLL KNLAKPLAVA SVSSAASFFL FRISNLPSVL
101: TGGGGGGDGN FGGFGGGGGG GDGNDGGFWG KLFSPSPAVA DEEQSPDWDS HGLPANIVVQ LNKLSGFKKY KVSDIMFFDR RRQTTIGTED SFFEMVSIRP
201: GGVYTKAQLQ KELETLATCG MFEKVDLEGK TKPDGTLGVT ISFAESTWQS ADRFRCINVG LMVQSKPIEM DSDMTDKEKL EYYRSLEKDY KRRIDRARPC
301: LLPAPVYGEV MQMLRDQGKV SARLLQRIRD RVQKWYHDEG YACAQVVNFG NLNTKEVVCE VVEGDITQLV IQFQDKLGNV VEGNTQVPVV RRELPKQLRQ
401: GYVFNIEAGK KALSNINSLG LFSNIEVNPR PDEKNEGGII VEIKLKELEQ KSAEVSTEWS IVPGRGGAPT LASFQPGGSV TFEHRNLQGL NRSLMGSVTT
501: SNFLNPQDDL SFKLEYVHPY LDGVYNPRNR TFKTSCFNSR KLSPVFTGGP GVEEVPPIWV DRAGVKANIT ENFTRQSKFT YGLVMEEITT RDESSHIAAN
601: GQRLLPSGGI SADGPPTTLS GTGVDRMAFL QANITRDNTK FVNGAVVGQR TVFQVDQGLG IGSKFPFFNR HQLTMTKFIQ LREVEQGAGK SPPPVLVLHG
701: HYGGCVGDLP SYDAFVLGGP YSVRGYNMGE LGAARNIAEV GAEIRIPVKN THVYAFVEHG NDLGSSKDVK GNPTAVYRRT GQGSSYGAGV KLGLVRAEYA
801: VDHNNGTGAL FFRFGERY
Arabidopsis Description
TOC75-3Protein TOC75-3, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9STE8]
SUBAcon: [plastid]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.