CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 9

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	plastid
BaCelLo:	plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	plastid
Predotar:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra002581.1-P	Field mustard	plastid	98.61	98.61
CDX80294	Canola	plastid	93.06	91.22
CDX86093	Canola	cytosol	60.78	77.24
CDX82997	Canola	cytosol	60.28	76.6
CDX99099	Canola	cytosol, plastid	67.84	72.41
AT1G35860.1	Thale cress	nucleus	34.05	67.67
KRH10219	Soybean	plastid	65.2	65.11
VIT_06s0004g05150.t01	Wine grape	plastid	66.08	64.85
HORVU4Hr1G022900.2	Barley	mitochondrion	32.03	63.82
Solyc06g076360.2.1	Tomato	plastid	65.32	63.79
KRH23106	Soybean	endoplasmic reticulum	64.06	63.5
CDX81332	Canola	mitochondrion	27.49	63.37
PGSC0003DMT400078190	Potato	plastid	65.32	61.81
TraesCS4D01G119300.1	Wheat	cytosol	45.78	60.1
TraesCS4D01G209900.1	Wheat	plastid	58.89	57.8
TraesCS4B01G209200.1	Wheat	plastid, unclear	58.89	57.65
TraesCS4A01G095300.1	Wheat	golgi, plastid	58.76	57.6
HORVU4Hr1G060190.1	Barley	plastid	58.89	57.58
EER95112	Sorghum	plastid	57.5	53.65
Zm00001d028586_P001	Maize	plastid	57.5	53.52
Zm00001d047828_P001	Maize	plasma membrane	57.5	53.46
TraesCS4A01G194000.1	Wheat	plastid	50.57	52.9
KXG36538	Sorghum	nucleus	52.59	52.45
CDX78609	Canola	extracellular	9.58	50.67
CDX70592	Canola	cytosol	5.17	48.81
CDX68401	Canola	cytosol	60.4	40.91
CDY55302	Canola	cytosol, peroxisome	8.7	26.95
CDX92514	Canola	cytosol	12.36	25.19
CDX87938	Canola	cytosol	9.96	22.13
CDY58968	Canola	nucleus, plastid	16.39	17.78
GSMUA_Achr9P03850_001	Banana	nucleus, peroxisome, plastid	4.29	14.59
CDX92515	Canola	nucleus, plastid	7.94	13.18

Protein Annotations

EnsemblPlants:CDY33023	EnsemblPlantsGene:GSBRNA2T00053249001	Gene3D:2.40.160.50	Gene3D:3.10.20.310	GO:A0A078H859	GO:GO:0005575
GO:GO:0016020	GO:GO:0019867	InterPro:Bac_surfAg_D15	PANTHER:PTHR12815	PANTHER:PTHR12815:SF18	PFAM:PF01103
ProteinID:CDY33023	ProteinID:CDY33023.1	SEG:seg	UniParc:UPI0004EEA636	UniProt:A0A078H859	MapMan:23.1.2.1

Description

BnaA10g12290DBnaA10g12290D protein [Source:UniProtKB/TrEMBL;Acc:A0A078H859]

Coordinates

chrLK032304:+:301128..303900

Molecular Weight (calculated)

86888.3 Da

IEP (calculated)

9.008

GRAVY (calculated)

-0.408

Length

793 amino acids

Sequence
(BLAST)

001: MTTFAINGQL TTLPAVTTTG CHLSTSSKYS APSSSYELRY KAPSPRFPSL RCCCSSPNRN TEPSSRGHLL QSLGKSLFFG SISSSGGGGG GGRGGGDGGL
101: WRDLFSLATP VAVAAEEHSP EWDSHGLPAN IVVQLNKLSG LKKYKISDVL FFDRRSKTTA SAEDSFSEMV PIHPGKVYTK AQLQNELETL TTSGMFEKVD
201: LLGNTKPDGA LGLTFSFLES TWKNAERFRC INVGLMTQPD PIAPDSDMTD REMIEYMRKQ DKEYKRRIEK ARPCLLPGPV QREMMLMLRD QTNVSARLLR
301: RIGDKVLKWY HDNGYPYANV TNFGNLNSKE LVCEVSEGDI TRLVIQFQDK LGYVVEGHTQ IPIIHREIPK QLRPGNALNM EAANQAVKNI FSLNLFSNVE
401: INPRPDEKNE GGVVVEIKLR EADRKSAEVS TEWSIVPGPG GAPSLASLQP GGSVSFEHRN IHGLNRSLMG SVTTSNLLDP EDDLAFKLEY VHPHVDGVNN
501: PRNRVFKTSA FNSRKLSPVF TGGPGFEELV PPLLVDRVGI KANITENFTR QSKSTYGLVL EEITTRDGNS EISTNGVRLL PSGGTSVDGP PTTLSGTGID
601: RVAFLQANVT RDKTKFVNGA IVGDRTVFQV DQGLGIGNKF PFFNRHQLSL TKFIQLKRVE QGSRKPQPPV LVLHGHYGGC VGDLPSYEAF GIGGPHSVRG
701: YTMGELGASR NILELSAEIR VPVKNTHVYA FAEHGNDLGS SKDVKGNPTE AYRRMGHGSS YGFGVKLGQV RAEYAVDHNR GTGAFFLRFG ERY

Best Arabidopsis Sequence Match ( AT4G09080.2 )
(BLAST)

001: MDFFFVVQVI VMEAVKEAVR KIKSLVIPHA DEKDNGIVFE IKLNETDQRV EKWGLDPSLD FFEVTGNCNL GRPNSEGSNQ SLMGSVTIRN IFNPKLDDLL
101: SKIEYVRFLE AVKKPRNRTF KTSFFNSRKL SPVFTGGPGY EDLVPPMFVG RDCLKATITE NLTRQRELTY GVMFEEIITR DENRRISENG LLLSPDGGIS
201: INGPPTTLSG TGIDHIATLQ ANITRDNTKL VNGAVVGEKN IFQVDQGLGI GNNFPLFNRH QLSLTSFIQL KQVEEGSDKP QPPVLVLHGR YGGCIGDLPS
301: YDVFALGGPN SVRGYSMGEL GAAKNILELG AEIRIPVKNT HVYAFAEHGN DLGSSKDVKG NPTGLYRKMG HGSSYGLGVK LGMVRAEYTV RHNRGTGALF
401: LRFGERY

Arabidopsis Description

TOC75-IVOuter membrane OMP85 family protein [Source:TAIR;Acc:AT4G09080]
SUBAcon: [golgi]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.