Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| HORVU4Hr1G022900.2 | Barley | mitochondrion | 41.6 | 41.71 |
| AT4G09080.2 | Thale cress | golgi | 40.35 | 39.56 |
| TraesCS4D01G119300.1 | Wheat | cytosol | 54.14 | 35.76 |
| CDY33023 | Canola | plastid | 67.67 | 34.05 |
| Bra002581.1-P | Field mustard | plastid | 66.67 | 33.54 |
| CDX80294 | Canola | plastid | 67.67 | 33.37 |
| VIT_06s0004g05150.t01 | Wine grape | plastid | 66.42 | 32.8 |
| AT3G46740.1 | Thale cress | plastid | 66.92 | 32.64 |
| Solyc06g076360.2.1 | Tomato | plastid | 64.91 | 31.9 |
| KRH23106 | Soybean | endoplasmic reticulum | 63.91 | 31.88 |
| KRH10219 | Soybean | plastid | 63.41 | 31.86 |
| PGSC0003DMT400078190 | Potato | plastid | 64.41 | 30.67 |
| HORVU4Hr1G060190.1 | Barley | plastid | 58.4 | 28.73 |
| TraesCS4D01G209900.1 | Wheat | plastid | 58.15 | 28.71 |
| TraesCS4B01G209200.1 | Wheat | plastid, unclear | 58.15 | 28.64 |
| TraesCS4A01G095300.1 | Wheat | golgi, plastid | 57.89 | 28.55 |
| TraesCS4A01G194000.1 | Wheat | plastid | 53.88 | 28.36 |
| KXG36538 | Sorghum | nucleus | 55.64 | 27.92 |
| EER95112 | Sorghum | plastid | 58.65 | 27.53 |
| Zm00001d028586_P001 | Maize | plastid | 58.65 | 27.46 |
| Zm00001d047828_P001 | Maize | plasma membrane | 58.65 | 27.43 |
| AT3G44160.1 | Thale cress | cytosol | 13.53 | 14.92 |
| AT3G48620.1 | Thale cress | extracellular | 10.03 | 12.46 |
| GSMUA_Achr9P03850_001 | Banana | nucleus, peroxisome, plastid | 6.77 | 11.59 |
| Os12t0115950-00 | Rice | nucleus, plasma membrane | 7.02 | 11.52 |
| AT5G19620.1 | Thale cress | plastid | 19.55 | 10.66 |
Protein Annotations
| ArrayExpress:AT1G35860 | EnsemblPlants:AT1G35860.1 | EnsemblPlantsGene:AT1G35860 | EntrezGene:840488 | Gene3D:3.10.20.310 | PANTHER:PTHR12815 |
| PANTHER:PTHR12815:SF18 | ProteinID:AAG51082.1 | ProteinID:AEE31832.1 | RefSeq:AT1G35860 | RefSeq:AT1G35860-TAIR-G | RefSeq:NP_174821.1 |
| Symbol:TOC75-I | TAIR:AT1G35860 | TAIR:AT1G35860.1 | Unigene:At.51965 | UniParc:UPI00000A28E3 | UniProt:Q9C8B7 |
| MapMan:35.1 | : | : | : | : | : |
Description
TOC75-ITranslocon outer membrane complex 75-I [Source:UniProtKB/TrEMBL;Acc:Q9C8B7]
Coordinates
chr1:-:13332047..13334050
Molecular Weight (calculated)
43552.8 Da
IEP (calculated)
8.763
GRAVY (calculated)
-0.362
Length
399 amino acids
Sequence
(BLAST)
(BLAST)
001: MIEYLGSQEK EYKQRIEKAR PSRGNAYAKR SRSLSARLLH KVKERVLKWY PDQGYSFANV VSFGNLNSKE LIFEVMEGDI TQLVIQFQDK LGNVAEGHVL
101: NIKVVHEAVR NIHSLGLFSN IEIMPIPNEK REGGVIVEVK LQETDQKSVE GSADRSIVPD PGGYPSLASS QPSGTISFEH PNIKGLNRSL IGSIATSNFL
201: NPEDDLSFKL EYVHPYLDGV SNPRNRTFKT SIFNSSKLSS VLTGGPGFEE AVAPILMDRA AINVNGSPTT LSGMGIDRVA FLQGNITQDN TKFVNGAIVG
301: ERKIIQVDQC LGDLPGYDAF SLGGPNYVRY TKGELGAARN IVELKVGAEL RVNVKNTQGY AFAEHGNDLG SSKDMKGNPT AAFRREGHGS SYGVGMKLG
101: NIKVVHEAVR NIHSLGLFSN IEIMPIPNEK REGGVIVEVK LQETDQKSVE GSADRSIVPD PGGYPSLASS QPSGTISFEH PNIKGLNRSL IGSIATSNFL
201: NPEDDLSFKL EYVHPYLDGV SNPRNRTFKT SIFNSSKLSS VLTGGPGFEE AVAPILMDRA AINVNGSPTT LSGMGIDRVA FLQGNITQDN TKFVNGAIVG
301: ERKIIQVDQC LGDLPGYDAF SLGGPNYVRY TKGELGAARN IVELKVGAEL RVNVKNTQGY AFAEHGNDLG SSKDMKGNPT AAFRREGHGS SYGVGMKLG
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.