Factsheet for AT4G09080.2

Subcellular Localization

min:

: max

Winner_takes_all: golgi

Predictor Summary:

nucleus 1
cytosol 3
plastid 1
extracellular 3
endoplasmic reticulum 3
vacuole 3
plasma membrane 3
golgi 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	golgi
Any Predictor:	cytosol, nucleus, plastid, secretory
BaCelLo:	nucleus
EpiLoc:	cytosol
MultiLoc:	cytosol
Plant-mPloc:	plastid
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	cytosol
YLoc:	golgi

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX81332	Canola	mitochondrion	34.64	40.99
AT1G35860.1	Thale cress	nucleus	39.56	40.35
HORVU4Hr1G022900.2	Barley	mitochondrion	39.07	39.95
TraesCS4D01G119300.1	Wheat	cytosol	52.09	35.1
VIT_06s0004g05150.t01	Wine grape	plastid	63.39	31.93
KRH10219	Soybean	plastid	62.16	31.86
AT3G46740.1	Thale cress	plastid	63.88	31.78
KRH23106	Soybean	endoplasmic reticulum	62.16	31.62
Solyc06g076360.2.1	Tomato	plastid	62.65	31.4
PGSC0003DMT400078190	Potato	plastid	62.16	30.19
KXG36538	Sorghum	nucleus	55.28	28.3
TraesCS4D01G209900.1	Wheat	plastid	55.28	27.85
TraesCS4A01G095300.1	Wheat	golgi, plastid	55.28	27.81
TraesCS4B01G209200.1	Wheat	plastid, unclear	55.28	27.78
HORVU4Hr1G060190.1	Barley	plastid	55.04	27.62
TraesCS4A01G194000.1	Wheat	plastid	51.35	27.57
EER95112	Sorghum	plastid	55.28	26.47
Zm00001d028586_P001	Maize	plastid	55.04	26.29
Zm00001d047828_P001	Maize	plasma membrane	54.3	25.91
AT3G48620.1	Thale cress	extracellular	16.22	20.56
AT3G44160.1	Thale cress	cytosol	17.94	20.17
AT5G19620.1	Thale cress	plastid	20.39	11.34
GSMUA_Achr9P03850_001	Banana	nucleus, peroxisome, plastid	5.41	9.44
Os12t0115950-00	Rice	nucleus, plasma membrane	1.72	2.88

Protein Annotations

Gene3D:2.40.160.50	MapMan:23.1.2.1	EntrezGene:826486	UniProt:A0A1P8B6V9	ProteinID:AEE82720.1	ProteinID:ANM67328.1
ProteinID:ANM67329.1	ArrayExpress:AT4G09080	EnsemblPlantsGene:AT4G09080	RefSeq:AT4G09080	TAIR:AT4G09080	RefSeq:AT4G09080-TAIR-G
EnsemblPlants:AT4G09080.2	EMBL:AY585655	Unigene:At.50329	InterPro:Bac_surfAg_D15	ProteinID:CAB78032.1	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0006810	GO:GO:0008150	GO:GO:0009507
GO:GO:0009527	GO:GO:0009536	GO:GO:0009662	GO:GO:0009707	GO:GO:0009987	GO:GO:0015031
GO:GO:0016020	GO:GO:0016021	GO:GO:0016043	GO:GO:0019867	GO:GO:0031359	GO:GO:0045036
RefSeq:NP_001329162.1	RefSeq:NP_001329163.1	RefSeq:NP_192647.2	PFAM:PF01103	PANTHER:PTHR12815	PANTHER:PTHR12815:SF18
Symbol:TOC75-IV	UniParc:UPI00000A8FCE	:	:	:	:

Description

TOC75-IVOuter membrane OMP85 family protein [Source:TAIR;Acc:AT4G09080]

Coordinates

chr4:+:5804389..5806355

Molecular Weight (calculated)

44959.9 Da

IEP (calculated)

8.424

GRAVY (calculated)

-0.290

Length

407 amino acids

Sequence
(BLAST)

001: MDFFFVVQVI VMEAVKEAVR KIKSLVIPHA DEKDNGIVFE IKLNETDQRV EKWGLDPSLD FFEVTGNCNL GRPNSEGSNQ SLMGSVTIRN IFNPKLDDLL
101: SKIEYVRFLE AVKKPRNRTF KTSFFNSRKL SPVFTGGPGY EDLVPPMFVG RDCLKATITE NLTRQRELTY GVMFEEIITR DENRRISENG LLLSPDGGIS
201: INGPPTTLSG TGIDHIATLQ ANITRDNTKL VNGAVVGEKN IFQVDQGLGI GNNFPLFNRH QLSLTSFIQL KQVEEGSDKP QPPVLVLHGR YGGCIGDLPS
301: YDVFALGGPN SVRGYSMGEL GAAKNILELG AEIRIPVKNT HVYAFAEHGN DLGSSKDVKG NPTGLYRKMG HGSSYGLGVK LGMVRAEYTV RHNRGTGALF
401: LRFGERY

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.