CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 1
mitochondrion 5

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	mitochondrion, plastid
BaCelLo:	plastid
MultiLoc:	mitochondrion
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	mitochondrion
YLoc:	mitochondrion

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX82997	Canola	cytosol	74.42	41.03
CDX86093	Canola	cytosol	74.13	40.87
CDX99099	Canola	cytosol, plastid	76.74	35.53
AT4G09080.2	Thale cress	golgi	40.99	34.64
VIT_06s0004g05150.t01	Wine grape	plastid	70.35	29.95
Solyc06g076360.2.1	Tomato	plastid	70.64	29.93
KRH10219	Soybean	plastid	68.6	29.72
KRH23106	Soybean	endoplasmic reticulum	68.9	29.62
PGSC0003DMT400078190	Potato	plastid	70.06	28.76
HORVU4Hr1G022900.2	Barley	mitochondrion	32.85	28.39
TraesCS4D01G119300.1	Wheat	cytosol	48.84	27.81
CDY33023	Canola	plastid	63.37	27.49
CDX80294	Canola	plastid	63.37	26.95
TraesCS4D01G209900.1	Wheat	plastid	57.56	24.5
TraesCS4A01G095300.1	Wheat	golgi, plastid	57.56	24.47
TraesCS4B01G209200.1	Wheat	plastid, unclear	57.56	24.44
HORVU4Hr1G060190.1	Barley	plastid	57.56	24.41
TraesCS4A01G194000.1	Wheat	plastid	53.49	24.27
KXG36538	Sorghum	nucleus	54.07	23.4
EER95112	Sorghum	plastid	56.98	23.06
Zm00001d028586_P001	Maize	plastid	56.98	23.0
Zm00001d047828_P001	Maize	plasma membrane	56.4	22.74
CDX68401	Canola	cytosol	74.42	21.86
CDX70592	Canola	cytosol	4.94	20.24
CDY55302	Canola	cytosol, peroxisome	12.5	16.8
CDX92514	Canola	cytosol	15.99	14.14
CDX87938	Canola	cytosol	13.95	13.45
CDY58968	Canola	nucleus, plastid	19.48	9.17
GSMUA_Achr9P03850_001	Banana	nucleus, peroxisome, plastid	5.81	8.58
CDX78609	Canola	extracellular	3.49	8.0
CDX92515	Canola	nucleus, plastid	8.14	5.86

Protein Annotations

EnsemblPlants:CDX81332	EnsemblPlantsGene:GSBRNA2T00134875001	PANTHER:PTHR12815	PANTHER:PTHR12815:SF18	ProteinID:CDX81332	ProteinID:CDX81332.1
SEG:seg	UniParc:UPI0004EEC953	MapMan:35.1	:	:	:

Description

BnaC09g07430D

Coordinates

chrLK031824:+:1056815..1059683

Molecular Weight (calculated)

37760.2 Da

IEP (calculated)

9.636

GRAVY (calculated)

-0.373

Length

344 amino acids

Sequence
(BLAST)

001: MNLCRLCRKG NRKFLFLGSR STKVSDIVFF ESRPGGVYTK AQLQKELETL ATCGMFEKVD LEGNPRSHHL LRGEHVASKP IEMDADMTDK EKLEYCRSGG
101: WIGRYHVNPR QDEKKNEGGI IVPGPGGPPT LASFQPGGVC YFFEHRNIQG LNRSLMGSVT TSNFLNPQDD LSPVFTGGPG VEEVPPIWVD RAGRLLPSGG
201: ISADGPPTTL SGTGIDRMAF LHANNTKFVN GAVVGERNVF QVDQRLATKP FVLGGPYSVR GYNMGELGAA RNILEHWNDL GSSKDVKGNP TAVYRRMGQG
301: SSYGVGVKLG LVRAEYALDH NNGTGALFFR VWREVLRLVR SKFV

Best Arabidopsis Sequence Match ( AT1G35860.1 )
(BLAST)

001: MIEYLGSQEK EYKQRIEKAR PSRGNAYAKR SRSLSARLLH KVKERVLKWY PDQGYSFANV VSFGNLNSKE LIFEVMEGDI TQLVIQFQDK LGNVAEGHVL
101: NIKVVHEAVR NIHSLGLFSN IEIMPIPNEK REGGVIVEVK LQETDQKSVE GSADRSIVPD PGGYPSLASS QPSGTISFEH PNIKGLNRSL IGSIATSNFL
201: NPEDDLSFKL EYVHPYLDGV SNPRNRTFKT SIFNSSKLSS VLTGGPGFEE AVAPILMDRA AINVNGSPTT LSGMGIDRVA FLQGNITQDN TKFVNGAIVG
301: ERKIIQVDQC LGDLPGYDAF SLGGPNYVRY TKGELGAARN IVELKVGAEL RVNVKNTQGY AFAEHGNDLG SSKDMKGNPT AAFRREGHGS SYGVGMKLG

Arabidopsis Description

TOC75-ITranslocon outer membrane complex 75-I [Source:UniProtKB/TrEMBL;Acc:Q9C8B7]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.