Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 2
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY58968 | Canola | nucleus, plastid | 96.92 | 51.57 |
| Bra002250.1-P | Field mustard | cytosol, plastid | 96.66 | 51.16 |
| AT5G19620.1 | Thale cress | plastid | 91.52 | 48.63 |
| Os02t0196300-01 | Rice | mitochondrion, plasma membrane, plastid | 77.89 | 48.17 |
| HORVU6Hr1G033430.4 | Barley | cytosol | 67.61 | 47.47 |
| VIT_06s0004g01880.t01 | Wine grape | plastid | 82.01 | 47.4 |
| KRH10192 | Soybean | plastid | 80.21 | 46.09 |
| GSMUA_Achr9P19020_001 | Banana | plastid | 78.66 | 45.95 |
| EES06452 | Sorghum | mitochondrion | 77.38 | 45.68 |
| TraesCS6B01G192500.1 | Wheat | mitochondrion | 77.38 | 45.68 |
| Zm00001d053664_P001 | Maize | plastid | 77.12 | 45.66 |
| TraesCS6A01G158800.1 | Wheat | plastid | 76.86 | 45.51 |
| KRH23145 | Soybean | cytosol, nucleus, plastid | 79.69 | 45.26 |
| TraesCS6D01G153700.1 | Wheat | golgi | 76.61 | 45.22 |
| Zm00001d015837_P001 | Maize | plastid | 76.61 | 45.08 |
| PGSC0003DMT400021030 | Potato | cytosol, nucleus, peroxisome, plastid | 78.41 | 43.57 |
| Solyc11g062070.1.1 | Tomato | plastid | 78.15 | 43.55 |
| Solyc10g079290.1.1 | Tomato | plastid | 77.89 | 43.16 |
| CDY55302 | Canola | cytosol, peroxisome | 27.25 | 41.41 |
| CDX87938 | Canola | cytosol | 32.13 | 35.01 |
| CDX92515 | Canola | nucleus, plastid | 31.36 | 25.52 |
| CDX70592 | Canola | cytosol | 3.86 | 17.86 |
| CDX81332 | Canola | mitochondrion | 14.14 | 15.99 |
| CDX86093 | Canola | cytosol | 23.14 | 14.42 |
| CDX82997 | Canola | cytosol | 22.88 | 14.26 |
| CDY33023 | Canola | plastid | 25.19 | 12.36 |
| CDX80294 | Canola | plastid | 25.45 | 12.24 |
| CDX99099 | Canola | cytosol, plastid | 23.14 | 12.11 |
| CDX68401 | Canola | cytosol | 22.88 | 7.6 |
| CDX78609 | Canola | extracellular | 2.57 | 6.67 |
Protein Annotations
| EnsemblPlants:CDX92514 | EnsemblPlantsGene:GSBRNA2T00154293001 | Gene3D:2.40.160.50 | GO:A0A078DVS6 | GO:GO:0005575 | GO:GO:0016020 |
| GO:GO:0019867 | InterPro:Bac_surfAg_D15 | PANTHER:PTHR12815 | PANTHER:PTHR12815:SF32 | PFAM:PF01103 | ProteinID:CDX92514 |
| ProteinID:CDX92514.1 | SEG:seg | UniParc:UPI0004EE88DB | MapMan:35.1 | : | : |
Description
BnaA10g15530D
Coordinates
chrLK031872:-:1021761..1025087
Molecular Weight (calculated)
41628.1 Da
IEP (calculated)
7.861
GRAVY (calculated)
-0.278
Length
389 amino acids
Sequence
(BLAST)
(BLAST)
001: MAINQTMVVY SMLQGKRDVD TVLAMGIMED VSIIPQPAGD SGKVDLIMNC VERPSGGFSA GGGISSGITS GPLSGLIGSF AYSHRNIFGR NQKLNVSLER
101: GQIDSIFRIN YTDPWIEGDD KRTSRSIMVQ NSRTPGNLVH GNQPDNGSLT IGRVTAGIEY SRPFRPKWSG TAGLIFQHAG ARDEQGNPII KDFYSSPLTA
201: SGKTHDETLL AKFESIYTGS GEHGSTMFAF NMEQGLPVLP EWLFFNRVNA RTRKGIHIGP ASFLFSLSGG HVVGNFSPHE AFAIGGTNSV RGYEEGAVGS
301: GRSYVVGSGE VSFPMRGPVE GVLFTDYGTD LGSGNTVPGD PAGARLKPGS GYGYGFGVRV DSPLGPLRLE YAFNDKHNGR FHFGVGQRT
101: GQIDSIFRIN YTDPWIEGDD KRTSRSIMVQ NSRTPGNLVH GNQPDNGSLT IGRVTAGIEY SRPFRPKWSG TAGLIFQHAG ARDEQGNPII KDFYSSPLTA
201: SGKTHDETLL AKFESIYTGS GEHGSTMFAF NMEQGLPVLP EWLFFNRVNA RTRKGIHIGP ASFLFSLSGG HVVGNFSPHE AFAIGGTNSV RGYEEGAVGS
301: GRSYVVGSGE VSFPMRGPVE GVLFTDYGTD LGSGNTVPGD PAGARLKPGS GYGYGFGVRV DSPLGPLRLE YAFNDKHNGR FHFGVGQRT
001: MHCHNDDVRF SSSSIRIHSP SPKEQHSLLT NLQSCSKTFV SHLSNTRNSL NQMLQSLKNR HTPPPRSVRR PNLPTQMLNS VTQLMIGKSS PISLSLIQST
101: QFNWSESRDE NVETIRGLSS PLLCCASLSL TRPNESTQSV EGKDTVQQQK GHSVSRNAEE RVLISEVLVR TKDGEELERK DLEMEALAAL KACRANSALT
201: IREVQEDVHR IIESGYFCSC TPVAVDTRDG IRLMFQVEPN QEFRGLVCEN ANVLPSKFIH EAFRDGFGKV INIKRLEEAI TSINGWYMER GLFGIVSDID
301: TLSGGIVRLQ VAEAEVNNIS IRFLDRKTGE PTKGKTSPET ILRQLTTKKG QVYSMLQGKR DVDTVLAMGI MEDVSIIPQP AGDSGKVDLI MNCVERPSGG
401: FSAGGGISSG ITSGPLSGLI GSFAYSHRNL FGRNQKLNVS LERGQIDSIF RINYTDPWIE GDDKRTSRSI MVQNSRTPGN LVHGNQPDNS SLTIGRVTAG
501: VEYSRPFRPK WNGTAGLIFQ HAGARDEQGN PIIKDFYSSP LTASGKPHDE TMLAKLESIY TGSGDQGSTM FAFNMEQGLP VLPEWLCFNR VTGRARKGIH
601: IGPARFLFSL SGGHVVGKFS PHEAFVIGGT NSVRGYEEGA VGSGRSYVVG SGELSFPVRG PVEGVIFTDY GTDMGSGSTV PGDPAGARLK PGSGYGYGLG
701: VRVDSPLGPL RLEYAFNDQH AGRFHFGVGL RN
101: QFNWSESRDE NVETIRGLSS PLLCCASLSL TRPNESTQSV EGKDTVQQQK GHSVSRNAEE RVLISEVLVR TKDGEELERK DLEMEALAAL KACRANSALT
201: IREVQEDVHR IIESGYFCSC TPVAVDTRDG IRLMFQVEPN QEFRGLVCEN ANVLPSKFIH EAFRDGFGKV INIKRLEEAI TSINGWYMER GLFGIVSDID
301: TLSGGIVRLQ VAEAEVNNIS IRFLDRKTGE PTKGKTSPET ILRQLTTKKG QVYSMLQGKR DVDTVLAMGI MEDVSIIPQP AGDSGKVDLI MNCVERPSGG
401: FSAGGGISSG ITSGPLSGLI GSFAYSHRNL FGRNQKLNVS LERGQIDSIF RINYTDPWIE GDDKRTSRSI MVQNSRTPGN LVHGNQPDNS SLTIGRVTAG
501: VEYSRPFRPK WNGTAGLIFQ HAGARDEQGN PIIKDFYSSP LTASGKPHDE TMLAKLESIY TGSGDQGSTM FAFNMEQGLP VLPEWLCFNR VTGRARKGIH
601: IGPARFLFSL SGGHVVGKFS PHEAFVIGGT NSVRGYEEGA VGSGRSYVVG SGELSFPVRG PVEGVIFTDY GTDMGSGSTV PGDPAGARLK PGSGYGYGLG
701: VRVDSPLGPL RLEYAFNDQH AGRFHFGVGL RN
Arabidopsis Description
OEP80Outer envelope protein 80, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9C5J8]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.