Factsheet for Zm00001d015837_P001

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 5
mitochondrion 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	mitochondrion, plastid
ChloroP:	plastid
iPSORT:	mitochondrion
MultiLoc:	mitochondrion
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	plastid

plastid: 22065420
plastid: 23198870
mitochondrion: 27297264

msms PMID: 27297264 doi

D Dahal, KJ Newton, BP Mooney

Division of Biological Sciences, ‡Department of Biochemistry, and §The Charles W Gehrke Proteomics Center, University of Missouri , Columbia, Missouri 65211, United States.

msms PMID: 23198870 doi

M Huang, G Friso, K Nishimura, X Qu, PD Olinares, W Majeran, Q Sun, KJ van Wijk

Department of Plant Biology, Cornell University, Ithaca, New York 14853, United States.

msms PMID: 22065420 doi

W Majeran, G Friso, Y Asakura, X Qu, M Huang, L Ponnala, KP Watkins, A Barkan, KJ van Wijk

Department of Plant Biology, Cornell University, Ithaca, New York 14853, USA.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES06452	Sorghum	mitochondrion	92.59	92.87
Zm00001d053664_P001	Maize	plastid	91.38	91.93
HORVU6Hr1G033430.4	Barley	cytosol	74.43	88.81
Os02t0196300-01	Rice	mitochondrion, plasma membrane, plastid	83.36	87.6
TraesCS6B01G192500.1	Wheat	mitochondrion	81.69	81.94
TraesCS6A01G158800.1	Wheat	plastid	81.39	81.89
TraesCS6D01G153700.1	Wheat	golgi	81.09	81.34
CDX92514	Canola	cytosol	45.08	76.61
GSMUA_Achr9P19020_001	Banana	plastid	70.8	70.27
VIT_06s0004g01880.t01	Wine grape	plastid	67.17	65.97
KRH10192	Soybean	plastid	65.81	64.25
KRH23145	Soybean	cytosol, nucleus, plastid	65.96	63.65
Solyc11g062070.1.1	Tomato	plastid	65.05	61.6
CDY58968	Canola	nucleus, plastid	67.78	61.29
Solyc10g079290.1.1	Tomato	plastid	64.75	60.97
Bra002250.1-P	Field mustard	cytosol, plastid	67.62	60.82
AT5G19620.1	Thale cress	plastid	67.02	60.52
PGSC0003DMT400021030	Potato	cytosol, nucleus, peroxisome, plastid	62.03	58.57
CDX92515	Canola	nucleus, plastid	38.12	52.72
Zm00001d000311_P003	Maize	cytosol	18.46	33.8
Zm00001d047828_P001	Maize	plasma membrane	18.61	14.42
Zm00001d028586_P001	Maize	plastid	18.46	14.32

Protein Annotations

EntrezGene:103626853	Gene3D:2.40.160.50	Gene3D:3.10.20.310	MapMan:35.1	UniProt:A0A1D6H482	ProteinID:AQK69637.1
InterPro:Bac_surfAg_D15	InterPro:BamA/TamA_POTRA	GO:GO:0005575	GO:GO:0016020	GO:GO:0019031	GO:GO:0019867
InterPro:IPR034746	PFAM:PF01103	PFAM:PF07244	InterPro:POTRA	PFscan:PS51779	PANTHER:PTHR12815
PANTHER:PTHR12815:SF32	UniParc:UPI000221A2A9	EnsemblPlantsGene:Zm00001d015837	EnsemblPlants:Zm00001d015837_P001	EnsemblPlants:Zm00001d015837_T001	SEG:seg

Description

Outer envelope protein 80 chloroplastic

Coordinates

chr5:+:124870872..124878713

Molecular Weight (calculated)

71380.9 Da

IEP (calculated)

8.095

GRAVY (calculated)

-0.289

Length

661 amino acids

Sequence
(BLAST)

001: MVRSCDVRFV SSGVKLPCES TSALAPSPSP SPAPALLSAA LPFAHIGRAI DAAARRLGSC LPRVPVARAD PAPSPPRRHG KDGGGPEERV LISEVAVRGK
101: DGEPLELPEL EAAAAAALRA CRPNAALTVR EVQEDVHRIV ESGLFRSCMP VAVDTRDGIR LVFEVEPNQD FHGLVCEGAN MLPSKFMEDA FRDRHGKIIN
201: IRHLDQVIKS VNRWYQERGL TGLVSYAEIL SGGILRLQVS EAEVNNISIR FLDRKTGEPT VGKTQTETIL RQLTTKKGQA YNRAQVKRDV ETILTMGIME
301: DVTIIPQPVG DSNKVDLVMN LVERPSGGFS AGGGISSGIT NGPLSGLIGS FAYSHRNVFG RNKKLNLSLE RGQIDSIFRL NFTDPWIDGD NKRTSRTVMV
401: QNSRTPGTLV HGGDHPDHAP ITIGRVIAGL EYSRPFRPKW SGTLGLIFQH AGARDDKGNP VIRDFYNSQL TASGHDYDDT LLAKFESIYT DSGDHSSTMF
501: VFNIEQGLPV LPEWLSFNRL TARLRQGYEI GPARLLLSAS GGHMEGNFPP HEAFAIGGTN SVRGYEEGAV GSGRSYAVGS GEVSCRMFGP LEGVVFGDYG
601: SDLGSGPKVP GDPAGARGKP GSGFGYGVGV RVDSPLGPLR LEYAFNDRQA SRFHFGVGYR N

Best Arabidopsis Sequence Match ( AT5G19620.1 )
(BLAST)

001: MHCHNDDVRF SSSSIRIHSP SPKEQHSLLT NLQSCSKTFV SHLSNTRNSL NQMLQSLKNR HTPPPRSVRR PNLPTQMLNS VTQLMIGKSS PISLSLIQST
101: QFNWSESRDE NVETIRGLSS PLLCCASLSL TRPNESTQSV EGKDTVQQQK GHSVSRNAEE RVLISEVLVR TKDGEELERK DLEMEALAAL KACRANSALT
201: IREVQEDVHR IIESGYFCSC TPVAVDTRDG IRLMFQVEPN QEFRGLVCEN ANVLPSKFIH EAFRDGFGKV INIKRLEEAI TSINGWYMER GLFGIVSDID
301: TLSGGIVRLQ VAEAEVNNIS IRFLDRKTGE PTKGKTSPET ILRQLTTKKG QVYSMLQGKR DVDTVLAMGI MEDVSIIPQP AGDSGKVDLI MNCVERPSGG
401: FSAGGGISSG ITSGPLSGLI GSFAYSHRNL FGRNQKLNVS LERGQIDSIF RINYTDPWIE GDDKRTSRSI MVQNSRTPGN LVHGNQPDNS SLTIGRVTAG
501: VEYSRPFRPK WNGTAGLIFQ HAGARDEQGN PIIKDFYSSP LTASGKPHDE TMLAKLESIY TGSGDQGSTM FAFNMEQGLP VLPEWLCFNR VTGRARKGIH
601: IGPARFLFSL SGGHVVGKFS PHEAFVIGGT NSVRGYEEGA VGSGRSYVVG SGELSFPVRG PVEGVIFTDY GTDMGSGSTV PGDPAGARLK PGSGYGYGLG
701: VRVDSPLGPL RLEYAFNDQH AGRFHFGVGL RN

Arabidopsis Description

OEP80Outer envelope protein 80, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9C5J8]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.