CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 7
extracellular 1
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH23145	Soybean	cytosol, nucleus, plastid	97.64	96.5
CDX92514	Canola	cytosol	46.09	80.21
HORVU6Hr1G033430.4	Barley	cytosol	59.82	73.1
VIT_06s0004g01880.t01	Wine grape	plastid	72.53	72.96
Os02t0196300-01	Rice	mitochondrion, plasma membrane, plastid	65.58	70.59
GSMUA_Achr9P19020_001	Banana	plastid	69.13	70.27
TraesCS6D01G153700.1	Wheat	golgi	67.06	68.89
TraesCS6A01G158800.1	Wheat	plastid	66.77	68.8
TraesCS6B01G192500.1	Wheat	mitochondrion	66.62	68.44
EES06452	Sorghum	mitochondrion	66.17	67.98
Solyc11g062070.1.1	Tomato	plastid	69.72	67.62
Zm00001d053664_P001	Maize	plastid	64.7	66.67
Solyc10g079290.1.1	Tomato	plastid	69.13	66.67
CDY58968	Canola	nucleus, plastid	71.64	66.35
Bra002250.1-P	Field mustard	cytosol, plastid	71.94	66.26
Zm00001d015837_P001	Maize	plastid	64.25	65.81
AT5G19620.1	Thale cress	plastid	70.31	65.03
PGSC0003DMT400021030	Potato	cytosol, nucleus, peroxisome, plastid	66.17	64.0
CDX92515	Canola	nucleus, plastid	41.36	58.58
KRH19528	Soybean	plastid	5.32	42.35
KRH26702	Soybean	cytosol	18.91	35.56
KRH22619	Soybean	cytosol	18.91	35.56
KRH32153	Soybean	plastid	16.4	30.66
KRH10219	Soybean	plastid	18.17	15.49
KRH23106	Soybean	endoplasmic reticulum	18.02	15.25

Protein Annotations

EMBL:ACUP02009121	EnsemblPlants:KRH10192	EnsemblPlantsGene:GLYMA_15G033700	EntrezGene:100794156	Gene3D:2.40.160.50	Gene3D:3.10.20.310
GO:GO:0005575	GO:GO:0016020	GO:GO:0019867	InterPro:Bac_surfAg_D15	InterPro:IPR034746	InterPro:POTRA
ncoils:Coil	PANTHER:PTHR12815	PANTHER:PTHR12815:SF32	PFAM:PF01103	PFscan:PS51779	ProteinID:KRH10192
ProteinID:KRH10192.1	SEG:seg	UniParc:UPI000233B76B	UniProt:I1MDA6	MapMan:35.1	:

Description

hypothetical protein

Coordinates

chr15:-:2686386..2693545

Molecular Weight (calculated)

73680.8 Da

IEP (calculated)

8.018

GRAVY (calculated)

-0.282

Length

677 amino acids

Sequence
(BLAST)

001: MFRNDDVCIV SSSIKIPLPY ISKRPTCPLR TAHSHIANAT NSIAQLVNSF TSHSTELTRS VLQKSSLLCS ATLSLTGDLE RKCPIRRLAS LSLAEEAQQK
101: ARQNEERVLI SEVLVRNKDG EELERKDLEA EAAQALKACR PNSALTVREV QEDVHRIINS GYFSSCMPVA VDTRDGIRLV FQVEPNQEFQ GLVCEGANVL
201: PAKFLEDSMR DGYGKIINLR RLDEALSSIN NWYMERGLFA MVSAVEILSG GILRLQVSEA EVDNISIRFL DRKTGETTMG KTKPETILRQ ITTKKGQVYS
301: MLEGKRDVET VLTMGIMEDV SIIPQPADTG KVDLVMNVVE RPSGGFSAGG GISSGITNGP LRGLIGSFAY SHRNVFGKNQ KLNISLERGQ IDSVYRINYT
401: DPWIQGDDKR TSRTIMIQNS RTPGTIVHGN ADGNGSLTIG RITGGIEFSR PIRPKWSGTV GLVFQHAGVR DEQGIPIIKD CYSSPLTASG NTHDDTLLAK
501: LETVYTGSGD HGSSMFVLNM EKGLPLLPEW LSFTRVNARA RKGVEIGPAR LHLSISGGHV VGNFSPYEAF AIGGTNSVRG YEEGSVGSGR SYVVGSGEVS
601: FPVYGPVEGV IFSDYGTDLG SGPTVPGDPA GARKKPGSGY GYGFGIRVES PLGPLRLEYA FNDKQDKRFH FGVGHRN

Best Arabidopsis Sequence Match ( AT5G19620.1 )
(BLAST)

001: MHCHNDDVRF SSSSIRIHSP SPKEQHSLLT NLQSCSKTFV SHLSNTRNSL NQMLQSLKNR HTPPPRSVRR PNLPTQMLNS VTQLMIGKSS PISLSLIQST
101: QFNWSESRDE NVETIRGLSS PLLCCASLSL TRPNESTQSV EGKDTVQQQK GHSVSRNAEE RVLISEVLVR TKDGEELERK DLEMEALAAL KACRANSALT
201: IREVQEDVHR IIESGYFCSC TPVAVDTRDG IRLMFQVEPN QEFRGLVCEN ANVLPSKFIH EAFRDGFGKV INIKRLEEAI TSINGWYMER GLFGIVSDID
301: TLSGGIVRLQ VAEAEVNNIS IRFLDRKTGE PTKGKTSPET ILRQLTTKKG QVYSMLQGKR DVDTVLAMGI MEDVSIIPQP AGDSGKVDLI MNCVERPSGG
401: FSAGGGISSG ITSGPLSGLI GSFAYSHRNL FGRNQKLNVS LERGQIDSIF RINYTDPWIE GDDKRTSRSI MVQNSRTPGN LVHGNQPDNS SLTIGRVTAG
501: VEYSRPFRPK WNGTAGLIFQ HAGARDEQGN PIIKDFYSSP LTASGKPHDE TMLAKLESIY TGSGDQGSTM FAFNMEQGLP VLPEWLCFNR VTGRARKGIH
601: IGPARFLFSL SGGHVVGKFS PHEAFVIGGT NSVRGYEEGA VGSGRSYVVG SGELSFPVRG PVEGVIFTDY GTDMGSGSTV PGDPAGARLK PGSGYGYGLG
701: VRVDSPLGPL RLEYAFNDQH AGRFHFGVGL RN

Arabidopsis Description

OEP80Outer envelope protein 80, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9C5J8]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.