CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
mitochondrion 2
cytosol 2
plastid 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH26702	Soybean	cytosol	96.67	96.67
AT3G44160.1	Thale cress	cytosol	80.83	80.39
VIT_06s0009g00240.t01	Wine grape	cytosol	79.72	79.72
CDX87938	Canola	cytosol	78.06	78.71
Bra034992.1-P	Field mustard	cytosol	79.44	78.57
CDY55302	Canola	cytosol, peroxisome	55.83	78.52
PGSC0003DMT400007724	Potato	cytosol	78.06	78.06
Solyc11g071890.1.1	Tomato	cytosol, golgi, nucleus	76.94	76.94
GSMUA_Achr6P31130_001	Banana	cytosol	64.44	64.44
Zm00001d000311_P003	Maize	cytosol	63.61	63.43
Os05t0510200-01	Rice	cytosol, nucleus, plasma membrane	62.5	62.33
TraesCS1D01G330700.3	Wheat	cytosol, nucleus, plastid	62.22	61.88
TraesCS1B01G342000.1	Wheat	cytosol, nucleus, plastid	62.22	61.88
GSMUA_Achr9P10370_001	Banana	cytosol	61.67	61.67
TraesCS1A01G328200.1	Wheat	plastid	56.94	60.47
KRH19528	Soybean	plastid	13.61	57.65
EES18465	Sorghum	cytosol	63.33	56.86
AT3G48620.1	Thale cress	extracellular	48.61	54.52
KRH32153	Soybean	plastid	48.33	48.07
HORVU1Hr1G077770.9	Barley	plastid	55.83	47.74
KRH10192	Soybean	plastid	35.56	18.91
KRH23145	Soybean	cytosol, nucleus, plastid	35.56	18.69
KRH23106	Soybean	endoplasmic reticulum	22.78	10.25
KRH10219	Soybean	plastid	22.5	10.2

Protein Annotations

EMBL:ACUP02008423	EnsemblPlants:KRH22619	EnsemblPlantsGene:GLYMA_13G312000	EntrezGene:100820409	Gene3D:2.40.160.50	GO:GO:0005575
GO:GO:0016020	GO:GO:0019867	InterPro:Bac_surfAg_D15	PANTHER:PTHR12815	PANTHER:PTHR12815:SF10	PFAM:PF01103
ProteinID:KRH22619	ProteinID:KRH22619.1	UniParc:UPI000233BF42	UniProt:I1M484	MapMan:19.2.5.2	:

Description

hypothetical protein

Coordinates

chr13:-:40717266..40721905

Molecular Weight (calculated)

38961.7 Da

IEP (calculated)

9.747

GRAVY (calculated)

-0.103

Length

360 amino acids

Sequence
(BLAST)

001: MGAQKSIHAG KAKIDVNVDF THKLCASLML PTLRSTGSPF SLVIGSLCIK HPNLFGGSEK LDVSWDKGLY DSNVLVAYRR PRPEWLAQQS FVLQHSLSPE
101: IGVHGIPVNN FSRSGSGGIN LSRLSVGMDL KEPASSKWSS TTSIKFEHVR PLNDDGRAIC RDYDGFPLTS SGNPHDSMVV LKQESQFAKA NDNSFFHFNL
201: QIEQGIPVLS KWIIFNRFKF VASKGIKLGP AFLLTRLTGG SIVGDMAPYQ AFSIGGLGSV RGYGEGAVGS GRSCLVANSE LTLPLNKMLE GAIFLDCGTD
301: LRSGHLVPGN PALRQSKPGS GIGLGYGLRF KSQFGHFQVD YAVNAYQQRT LYFGLSNLAS

Best Arabidopsis Sequence Match ( AT3G44160.1 )
(BLAST)

001: MGAQKSIHAG RAKIDVNVDF THKLCTSLMF PAFRDTSSPL SLVIGSLCIK HPNLFGGSEK LDVSWDKGLY DSNVLVAFRR PRPEWRPQQC FFIQHSLSPE
101: IGVHGTPVDN FSRSGSGGVN LSKLALGLDL SEPASSKWSS TTSIKFEHVR PINDDGRAIT RDLDGFPITC SGNTHDSMVV LKQESRFAKA TDQGLSHFSM
201: QIEQGIPVVS KWLIFNRFKF VASKGVRFGP AFLLASLTGG SIVGDMAPYQ AFAIGGLGSV RGYGEGAVGS GRSCLVANTE LALPLNKMTE GTIFLDCGTD
301: LGSSRLVPGN PSMRQGKPGF GYGFGYGLRF KSPLGHLQVD YAINAFNQKT LYFGVTNLAS ST

Arabidopsis Description

At3g44160 [Source:UniProtKB/TrEMBL;Acc:Q5PP51]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.