Factsheet for Os05t0510200-01

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, nucleus, cytosol

Predictor Summary:

nucleus 2
plasma membrane 2
cytosol 1
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d000311_P003	Maize	cytosol	91.69	91.69
TraesCS1B01G342000.1	Wheat	cytosol, nucleus, plastid	90.03	89.78
TraesCS1D01G330700.3	Wheat	cytosol, nucleus, plastid	89.75	89.5
TraesCS1A01G328200.1	Wheat	plastid	82.27	87.61
EES18465	Sorghum	cytosol	86.7	78.05
HORVU1Hr1G077770.9	Barley	plastid	80.06	68.65
GSMUA_Achr6P31130_001	Banana	cytosol	66.76	66.94
CDY55302	Canola	cytosol, peroxisome	45.15	63.67
PGSC0003DMT400007724	Potato	cytosol	62.88	63.06
GSMUA_Achr9P10370_001	Banana	cytosol	62.88	63.06
KRH26702	Soybean	cytosol	62.88	63.06
KRH22619	Soybean	cytosol	62.33	62.5
VIT_06s0009g00240.t01	Wine grape	cytosol	62.33	62.5
CDX87938	Canola	cytosol	61.5	62.18
Bra034992.1-P	Field mustard	cytosol	62.6	62.09
Solyc11g071890.1.1	Tomato	cytosol, golgi, nucleus	61.22	61.39
AT3G44160.1	Thale cress	cytosol	61.5	61.33
AT3G48620.1	Thale cress	extracellular	39.61	44.55
Os02t0196300-01	Rice	mitochondrion, plasma membrane, plastid	32.41	18.6
Os11t0116500-01	Rice	cytosol	22.44	12.27
Os03t0271200-01	Rice	plastid	21.33	9.42
Os03t0271300-01	Rice	mitochondrion	10.8	8.32
Os12t0115950-00	Rice	nucleus, plasma membrane	1.94	2.88

Protein Annotations

EMBL:AK064302	EnsemblPlants:Os05t0510200-01	EnsemblPlantsGene:Os05g0510200	EntrezGene:4339278	Gene3D:2.40.160.50	GO:GO:0005575
GO:GO:0016020	GO:GO:0019867	InterPro:Bac_surfAg_D15	PANTHER:PTHR12815	PANTHER:PTHR12815:SF10	PFAM:PF01103
ProteinID:AAT44133.1	ProteinID:BAF17921.1	ProteinID:BAS94831.1	RefSeq:XP_015637460.1	SEG:seg	UniParc:UPI00003A9248
UniProt:Q6L543	MapMan:19.2.5.2	:	:	:	:

Description

Similar to Glycine-rich cell wall structural protein 1.0 precursor (GRP 1.0). (Os05t0510200-01)

Coordinates

chr5:-:25267915..25272219

Molecular Weight (calculated)

38701.5 Da

IEP (calculated)

8.485

GRAVY (calculated)

-0.103

Length

361 amino acids

Sequence
(BLAST)

001: MGAQQSVNAG KAKVDVHVDL THMLCEALLL PPMRNSGATF SQIVGRISLK HPSLFGRSEK LDVILDKGIN ESNAVIAFRR PRPEWLSQQS FVIQHTMTPE
101: IAVHGFPADN FTRSGSRGIN LSRLSLGVEL NEPSTSNWTS GTSVKFEHIR PVNNEGRSIA RDHDGFPLTC SGNLHDNMII LKQESGYADV NDNSFLKVNL
201: QMEQGLPLVP KSLTFNRVKC AVSKGMKLGP TFLVTSLTGG SIVGDMAPYQ AFAIGGLGSV RGYGEGAVGA GRLCLIANCE YTVPLAKHLE GSIFMDCGSD
301: LGSACHVPGN PALRQGKPGF GVGFGYGIHF NTDLGQIRVD YAMNAFSRKT IYFGINSGGG S

Best Arabidopsis Sequence Match ( AT3G44160.1 )
(BLAST)

001: MGAQKSIHAG RAKIDVNVDF THKLCTSLMF PAFRDTSSPL SLVIGSLCIK HPNLFGGSEK LDVSWDKGLY DSNVLVAFRR PRPEWRPQQC FFIQHSLSPE
101: IGVHGTPVDN FSRSGSGGVN LSKLALGLDL SEPASSKWSS TTSIKFEHVR PINDDGRAIT RDLDGFPITC SGNTHDSMVV LKQESRFAKA TDQGLSHFSM
201: QIEQGIPVVS KWLIFNRFKF VASKGVRFGP AFLLASLTGG SIVGDMAPYQ AFAIGGLGSV RGYGEGAVGS GRSCLVANTE LALPLNKMTE GTIFLDCGTD
301: LGSSRLVPGN PSMRQGKPGF GYGFGYGLRF KSPLGHLQVD YAINAFNQKT LYFGVTNLAS ST

Arabidopsis Description

At3g44160 [Source:UniProtKB/TrEMBL;Acc:Q5PP51]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.