Factsheet for TraesCS1A01G328200.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 5
cytosol 1
vacuole 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, plastid, vacuole
iPSORT:	plastid
MultiLoc:	cytosol
Predotar:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	vacuole

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1B01G342000.1	Wheat	cytosol, nucleus, plastid	97.35	91.16
TraesCS1D01G330700.3	Wheat	cytosol, nucleus, plastid	97.05	90.88
Os05t0510200-01	Rice	cytosol, nucleus, plasma membrane	87.61	82.27
Zm00001d000311_P003	Maize	cytosol	85.55	80.33
HORVU1Hr1G077770.9	Barley	plastid	91.45	73.63
EES18465	Sorghum	cytosol	82.6	69.83
GSMUA_Achr6P31130_001	Banana	cytosol	67.55	63.61
CDY55302	Canola	cytosol, peroxisome	47.49	62.89
GSMUA_Achr9P10370_001	Banana	cytosol	63.72	60.0
KRH26702	Soybean	cytosol	61.06	57.5
CDX87938	Canola	cytosol	60.18	57.14
Bra034992.1-P	Field mustard	cytosol	61.36	57.14
KRH22619	Soybean	cytosol	60.47	56.94
AT3G44160.1	Thale cress	cytosol	60.77	56.91
VIT_06s0009g00240.t01	Wine grape	cytosol	59.88	56.39
PGSC0003DMT400007724	Potato	cytosol	59.0	55.56
Solyc11g071890.1.1	Tomato	cytosol, golgi, nucleus	58.7	55.28
AT3G48620.1	Thale cress	extracellular	41.89	44.24
TraesCS6A01G158800.1	Wheat	plastid	34.81	17.96
TraesCS4A01G194000.1	Wheat	plastid	23.89	10.69
TraesCS4A01G095300.1	Wheat	golgi, plastid	23.89	10.01

Protein Annotations

EnsemblPlants:TraesCS1A01G328200.1	EnsemblPlantsGene:TraesCS1A01G328200	Gene3D:2.40.160.50	GO:GO:0005575	GO:GO:0016020	GO:GO:0019867
InterPro:Bac_surfAg_D15	PANTHER:PTHR12815	PANTHER:PTHR12815:SF10	PFAM:PF01103	SEG:seg	MapMan:19.2.5.2

Description

No Description!

Coordinates

chr1A:-:517400373..517405291

Molecular Weight (calculated)

36419.7 Da

IEP (calculated)

9.003

GRAVY (calculated)

-0.091

Length

339 amino acids

Sequence
(BLAST)

001: MLCEALLLPP LSSSATISQI VGRISLKHPS LFGRSEKLDV ILDKGVNDSN VVVAFRRPRP EWLSQQSFVI QHSMTPEIAV HGFPADNFTR SGSRGVNLSR
101: LSLGVEINEP TTSKWTSGTS VKFEHIRPVN NDGRSIARDH EGFPLTCSGN LHDNMIILKQ ESGYADVKDN SFLRVNFQME QGLPLVPKSL TFNRVKCAVS
201: KGIKLGPTFL VTSLTGGSIV GDMAPYQAFA IGGLGSVRGY GEGAVGSGRL CLIGNCEYTV PLAKNLEGSL FMDCGSDLGS ARHVPGNPAL RQGKPGFGVG
301: FGYGVHFNTD IGQIRVDYAM NAFSRKTFYF SINTGGAGS

Best Arabidopsis Sequence Match ( AT3G44160.1 )
(BLAST)

001: MGAQKSIHAG RAKIDVNVDF THKLCTSLMF PAFRDTSSPL SLVIGSLCIK HPNLFGGSEK LDVSWDKGLY DSNVLVAFRR PRPEWRPQQC FFIQHSLSPE
101: IGVHGTPVDN FSRSGSGGVN LSKLALGLDL SEPASSKWSS TTSIKFEHVR PINDDGRAIT RDLDGFPITC SGNTHDSMVV LKQESRFAKA TDQGLSHFSM
201: QIEQGIPVVS KWLIFNRFKF VASKGVRFGP AFLLASLTGG SIVGDMAPYQ AFAIGGLGSV RGYGEGAVGS GRSCLVANTE LALPLNKMTE GTIFLDCGTD
301: LGSSRLVPGN PSMRQGKPGF GYGFGYGLRF KSPLGHLQVD YAINAFNQKT LYFGVTNLAS ST

Arabidopsis Description

At3g44160 [Source:UniProtKB/TrEMBL;Acc:Q5PP51]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.