Factsheet for Bra034992.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
mitochondrion 2
cytosol 2
plastid 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY55302	Canola	cytosol, peroxisome	70.05	99.61
CDX87938	Canola	cytosol	95.6	97.48
AT3G44160.1	Thale cress	cytosol	93.41	93.92
KRH26702	Soybean	cytosol	79.12	80.0
KRH22619	Soybean	cytosol	78.57	79.44
VIT_06s0009g00240.t01	Wine grape	cytosol	75.82	76.67
PGSC0003DMT400007724	Potato	cytosol	75.55	76.39
Solyc11g071890.1.1	Tomato	cytosol, golgi, nucleus	71.98	72.78
AT3G48620.1	Thale cress	extracellular	59.07	66.98
GSMUA_Achr6P31130_001	Banana	cytosol	63.19	63.89
Zm00001d000311_P003	Maize	cytosol	62.36	62.88
Os05t0510200-01	Rice	cytosol, nucleus, plasma membrane	62.09	62.6
TraesCS1B01G342000.1	Wheat	cytosol, nucleus, plastid	61.54	61.88
TraesCS1D01G330700.3	Wheat	cytosol, nucleus, plastid	61.54	61.88
GSMUA_Achr9P10370_001	Banana	cytosol	60.99	61.67
TraesCS1A01G328200.1	Wheat	plastid	57.14	61.36
EES18465	Sorghum	cytosol	60.71	55.11
HORVU1Hr1G077770.9	Barley	plastid	55.77	48.22
Bra002250.1-P	Field mustard	cytosol, plastid	36.54	18.1
Bra018198.1-P	Field mustard	cytosol	10.44	10.98
Bra002581.1-P	Field mustard	plastid	21.98	10.09
Bra033806.1-P	Field mustard	plastid	21.43	9.61
Bra018197.1-P	Field mustard	plastid	21.15	9.36
Bra018196.1-P	Field mustard	plastid	20.05	6.08
Bra006282.1-P	Field mustard	plasma membrane	0.82	1.3

Protein Annotations

EnsemblPlants:Bra034992.1	EnsemblPlants:Bra034992.1-P	EnsemblPlantsGene:Bra034992	Gene3D:2.40.160.50	GO:GO:0005575	GO:GO:0016020
GO:GO:0019867	InterPro:Bac_surfAg_D15	PANTHER:PTHR12815	PANTHER:PTHR12815:SF10	PFAM:PF01103	SEG:seg
UniParc:UPI000253E5C3	UniProt:M4F1P6	MapMan:19.2.5.2	:	:	:

Description

AT3G44160 (E=8e-193) | chloroplast outer membrane protein-related

Coordinates

chrScaffold000100:-:706828..708938

Molecular Weight (calculated)

39554.3 Da

IEP (calculated)

9.351

GRAVY (calculated)

-0.129

Length

364 amino acids

Sequence
(BLAST)

001: MGAQKSIHAG RAKIDVNVDF THKLCTSLMF PTFRTDKCWF GWSLYVGSLC IKHPNLFGGS EKLDVSWDKG LYDSNVLVAF RRPRPEWRPQ QCFFIQHSLS
101: PEIGVHGTPY DNFSRSGSGG VNLSKLAVGL DLSEPASSKW SSTTSVKFEH VRPMNDEGRL ITRDVDGFPV TCSGNTHDSM VVLKQESRFA KANDQGLSHF
201: SMQIEQGIPV VSKWLIFNRF KFVASKGVRL GPAFLLASLT GGSIVGDMAP YQAFAIGGLG SVRGYGEGAV GSGRSCLVAN TELALPLNKM TEGTIFLDCG
301: TDLGSSRLVP GNPSLRHGKP GFGYGFGYGL RFKSPLGHLQ VDYAINAFNQ KTLYFGVTNL ASSS

Best Arabidopsis Sequence Match ( AT3G44160.1 )
(BLAST)

001: MGAQKSIHAG RAKIDVNVDF THKLCTSLMF PAFRDTSSPL SLVIGSLCIK HPNLFGGSEK LDVSWDKGLY DSNVLVAFRR PRPEWRPQQC FFIQHSLSPE
101: IGVHGTPVDN FSRSGSGGVN LSKLALGLDL SEPASSKWSS TTSIKFEHVR PINDDGRAIT RDLDGFPITC SGNTHDSMVV LKQESRFAKA TDQGLSHFSM
201: QIEQGIPVVS KWLIFNRFKF VASKGVRFGP AFLLASLTGG SIVGDMAPYQ AFAIGGLGSV RGYGEGAVGS GRSCLVANTE LALPLNKMTE GTIFLDCGTD
301: LGSSRLVPGN PSMRQGKPGF GYGFGYGLRF KSPLGHLQVD YAINAFNQKT LYFGVTNLAS ST

Arabidopsis Description

At3g44160 [Source:UniProtKB/TrEMBL;Acc:Q5PP51]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.