Factsheet for Bra018197.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 9

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	plastid
BaCelLo:	plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	plastid
Predotar:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	plastid

PPI

Inferred distinct locusB in Crop

locusB	locations
Bra027667.1-P

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G46740.1	Bra027667.1-P	AT1G63900.1	23118188

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX86093	Canola	cytosol	75.7	99.84
AT3G46740.1	Thale cress	plastid	90.52	91.08
Bra033806.1-P	Field mustard	plastid	89.79	91.01
VIT_06s0004g05150.t01	Wine grape	plastid	77.52	78.96
KRH10219	Soybean	plastid	75.7	78.46
KRH23106	Soybean	endoplasmic reticulum	75.58	77.75
Solyc06g076360.2.1	Tomato	plastid	75.09	76.11
PGSC0003DMT400078190	Potato	plastid	75.09	73.75
Bra002581.1-P	Field mustard	plastid	67.31	69.86
HORVU4Hr1G022900.2	Barley	mitochondrion	33.78	69.85
Bra018196.1-P	Field mustard	plastid	97.45	66.78
TraesCS4D01G119300.1	Wheat	cytosol	48.72	66.39
HORVU4Hr1G060190.1	Barley	plastid	63.67	64.61
TraesCS4D01G209900.1	Wheat	plastid	63.43	64.6
TraesCS4B01G209200.1	Wheat	plastid, unclear	63.55	64.57
TraesCS4A01G095300.1	Wheat	golgi, plastid	63.43	64.52
EER95112	Sorghum	plastid	61.97	60.0
Zm00001d028586_P001	Maize	plastid	62.09	59.98
Zm00001d047828_P001	Maize	plasma membrane	61.97	59.79
TraesCS4A01G194000.1	Wheat	plastid	53.95	58.58
KXG36538	Sorghum	nucleus	53.83	55.72
Bra006282.1-P	Field mustard	plasma membrane	13.85	49.35
Bra034992.1-P	Field mustard	cytosol	9.36	21.15
Bra002250.1-P	Field mustard	cytosol, plastid	15.67	17.55
Bra018198.1-P	Field mustard	cytosol	7.29	17.34
GSMUA_Achr9P03850_001	Banana	nucleus, peroxisome, plastid	3.89	13.73

Protein Annotations

Gene3D:2.40.160.50	MapMan:23.1.2.1	Gene3D:3.10.20.310	InterPro:Bac_surfAg_D15	EnsemblPlantsGene:Bra018197	EnsemblPlants:Bra018197.1
EnsemblPlants:Bra018197.1-P	GO:GO:0003674	GO:GO:0005215	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0006810	GO:GO:0006886	GO:GO:0008150	GO:GO:0015450	GO:GO:0016020	GO:GO:0019867
GO:GO:0071806	InterPro:IAP75	UniProt:M4DNV9	PFAM:PF01103	PANTHER:PTHR12815	PANTHER:PTHR12815:SF18
TIGRFAMs:TIGR00992	UniParc:UPI000253F4F0	SEG:seg	:	:	:

Description

AT3G46740 (E=0.0) TOC75-III | TOC75-III (TRANSLOCON AT THE OUTER ENVELOPE MEMBRANE OF CHLOROPLASTS 75-III); P-P-bond-hydrolysis-driven protein transmembrane transporter

Coordinates

chrA06:+:10973172..10976385

Molecular Weight (calculated)

89563.3 Da

IEP (calculated)

8.863

GRAVY (calculated)

-0.360

Length

823 amino acids

Sequence
(BLAST)

001: MAAFSVNGQL IPAAATSSTT PNSIYPRRKF LAPSSSRLPR ISSPSPRVPS IKCSSSSSRD TEPSPSPKDS LLKSLSKPLA VASVSSAASF FLFRISNLPS
101: ILSSGGGGGG GGDGNFGGFG GGGGGGDGND GGFWGKLFSP APAVADEEQS PDWDSHGLPG NIVVQLNKLS GFKKYKVSDI VFFDRRRQTS IGTEDSFFEM
201: VSIRPGGVYT KAQLQKELET LATCGMFEKV DLEGKTKPDG TLGVTISFAE STWQSADRFR CINVGLMVQS KPIEMDTDMT DKEKLEYYRS LEKDYKRRID
301: RARPCLLPAP VYGEVMQMLR DQGKVSARLL QKIRDRVQKW YHDEGYACAQ VVNFGNLNTK EVVCEVVEGD ITQLVIQYQD KLGNVVEGNT QVPVVRRELP
401: KQLRQGYVFN IEAGKQALRN INSLGLFSNI EVNPRPDEKN EGGIIVEIKL KELEQKSAEV STEWSIVPGR GGAPTLASFQ PGGSVTFEHR NIQGLNRSLM
501: GSVTTSNFLN PQDDLSFKME YVHPYLDGVY NPRNRTFKTS CFNSRKLSPV FTGGPGVEEV PPIWVDRAGV KANITENFTR QSKFTYGLVM EEITTRDESS
601: HIAANGQRLL PSGGISAAGP PTTLSGTGID RMAFLQANIT RDNTKFVNGA VVGERNVFQV DQGLGIGSKF PFFNRHQLTL TRFIQLQQVE EGAGKPPPPV
701: LVLHGHYGGC VGDLPSYDAF VLGGPYSVRG YNMGELGAAR NILELGAEIR VPVKNTHVYA FAEHGNDLGS SKDVKGNPTA VYRRMGQGSS YGVGVKLGLV
801: RAEYAVDHNN GTGALFFRFG ERY

Best Arabidopsis Sequence Match ( AT3G46740.1 )
(BLAST)

001: MAAFSVNGQL IPTATSSTAS TSLSSRRKFL SPSSSRLPRI STQSPRVPSI KCSKSLPNRD TETSSKDSLL KNLAKPLAVA SVSSAASFFL FRISNLPSVL
101: TGGGGGGDGN FGGFGGGGGG GDGNDGGFWG KLFSPSPAVA DEEQSPDWDS HGLPANIVVQ LNKLSGFKKY KVSDIMFFDR RRQTTIGTED SFFEMVSIRP
201: GGVYTKAQLQ KELETLATCG MFEKVDLEGK TKPDGTLGVT ISFAESTWQS ADRFRCINVG LMVQSKPIEM DSDMTDKEKL EYYRSLEKDY KRRIDRARPC
301: LLPAPVYGEV MQMLRDQGKV SARLLQRIRD RVQKWYHDEG YACAQVVNFG NLNTKEVVCE VVEGDITQLV IQFQDKLGNV VEGNTQVPVV RRELPKQLRQ
401: GYVFNIEAGK KALSNINSLG LFSNIEVNPR PDEKNEGGII VEIKLKELEQ KSAEVSTEWS IVPGRGGAPT LASFQPGGSV TFEHRNLQGL NRSLMGSVTT
501: SNFLNPQDDL SFKLEYVHPY LDGVYNPRNR TFKTSCFNSR KLSPVFTGGP GVEEVPPIWV DRAGVKANIT ENFTRQSKFT YGLVMEEITT RDESSHIAAN
601: GQRLLPSGGI SADGPPTTLS GTGVDRMAFL QANITRDNTK FVNGAVVGQR TVFQVDQGLG IGSKFPFFNR HQLTMTKFIQ LREVEQGAGK SPPPVLVLHG
701: HYGGCVGDLP SYDAFVLGGP YSVRGYNMGE LGAARNIAEV GAEIRIPVKN THVYAFVEHG NDLGSSKDVK GNPTAVYRRT GQGSSYGAGV KLGLVRAEYA
801: VDHNNGTGAL FFRFGERY

Arabidopsis Description

TOC75-3Protein TOC75-3, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9STE8]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.