Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- plastid 7
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
plasma membrane:
23508561
plasma membrane: 27341663 |
msms PMID:
27341663
doi
Bond Life Sciences Center, University of Missouri, Columbia, MO, 65211, USA., Division of Biochemistry, University of Missouri, Columbia, MO, 65211, USA., Division of Plant Sciences, University of Missouri, Columbia, MO, 65211, USA., Interdisciplinary Plant Group, University of Missouri, Columbia, MO, 65211, USA.
|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| Zm00001d007060_P003 |
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT3G46740.1 | Zm00001d007060_P003 | AT1G63900.1 | 23118188 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| EER95112 | Sorghum | plastid | 95.66 | 96.0 |
| Zm00001d028586_P001 | Maize | plastid | 94.84 | 94.95 |
| Os03t0271200-01 | Rice | plastid | 81.83 | 85.43 |
| TraesCS4B01G209200.1 | Wheat | plastid, unclear | 80.89 | 85.19 |
| HORVU4Hr1G060190.1 | Barley | plastid | 80.89 | 85.08 |
| TraesCS4A01G095300.1 | Wheat | golgi, plastid | 80.66 | 85.04 |
| TraesCS4D01G209900.1 | Wheat | plastid | 80.19 | 84.65 |
| GSMUA_Achr9P03840_001 | Banana | cytosol | 28.84 | 78.59 |
| GSMUA_Achr10P... | Banana | cytosol | 49.47 | 76.31 |
| CDX86093 | Canola | cytosol | 53.11 | 72.6 |
| CDX82997 | Canola | cytosol | 52.4 | 71.63 |
| GSMUA_Achr9P03830_001 | Banana | cytosol | 11.61 | 70.21 |
| CDX99099 | Canola | cytosol, plastid | 59.2 | 67.97 |
| GSMUA_Achr6P15190_001 | Banana | mitochondrion | 54.75 | 64.06 |
| VIT_06s0004g05150.t01 | Wine grape | plastid | 60.61 | 63.99 |
| KRH10219 | Soybean | plastid | 59.32 | 63.73 |
| Bra033806.1-P | Field mustard | plastid | 59.55 | 62.56 |
| KRH23106 | Soybean | endoplasmic reticulum | 58.5 | 62.38 |
| Solyc06g076360.2.1 | Tomato | plastid | 59.32 | 62.32 |
| Bra018197.1-P | Field mustard | plastid | 59.79 | 61.97 |
| AT3G46740.1 | Thale cress | plastid | 59.32 | 61.86 |
| PGSC0003DMT400078190 | Potato | plastid | 59.09 | 60.14 |
| AT1G35860.1 | Thale cress | nucleus | 27.43 | 58.65 |
| Bra002581.1-P | Field mustard | plastid | 53.69 | 57.76 |
| CDY33023 | Canola | plastid | 53.46 | 57.5 |
| CDX70592 | Canola | cytosol | 5.63 | 57.14 |
| CDX81332 | Canola | mitochondrion | 22.74 | 56.4 |
| CDX80294 | Canola | plastid | 53.46 | 56.37 |
| CDX78609 | Canola | extracellular | 9.85 | 56.0 |
| AT4G09080.2 | Thale cress | golgi | 25.91 | 54.3 |
| Bra006282.1-P | Field mustard | plasma membrane | 11.84 | 43.72 |
| Bra018196.1-P | Field mustard | plastid | 58.73 | 41.72 |
| CDX68401 | Canola | cytosol | 52.4 | 38.17 |
| Zm00001d000311_P003 | Maize | cytosol | 9.73 | 22.99 |
| Zm00001d053664_P001 | Maize | plastid | 14.89 | 19.33 |
| Zm00001d015837_P001 | Maize | plastid | 14.42 | 18.61 |
| GSMUA_Achr9P03850_001 | Banana | nucleus, peroxisome, plastid | 3.63 | 13.3 |
Protein Annotations
| EnsemblPlants:Zm00001d047828_P001 | EnsemblPlants:Zm00001d047828_T001 | EnsemblPlantsGene:Zm00001d047828 | EntrezGene:100501833 | Gene3D:2.40.160.50 | Gene3D:3.10.20.310 |
| GO:GO:0005575 | GO:GO:0016020 | GO:GO:0019867 | InterPro:Bac_surfAg_D15 | PANTHER:PTHR12815 | PANTHER:PTHR12815:SF14 |
| PFAM:PF01103 | ProteinID:AQL07708.1 | SEG:seg | UniParc:UPI0008433DA1 | UniProt:A0A1D6PDR8 | MapMan:23.1.2.1 |
Description
Protein TOC75-3 chloroplastic
Coordinates
chr9:-:142625874..142631787
Molecular Weight (calculated)
91696.7 Da
IEP (calculated)
8.033
GRAVY (calculated)
-0.293
Length
853 amino acids
Sequence
(BLAST)
(BLAST)
001: MALTSQGITL RSPPAGPRGH GGRRSSSVPT AATPRVLGQP HAGQALSISP VRYEPAARPP RGGSAAAAIR AAASAGAQPG SDPVSAEPRI ELPTIFSVFS
101: ETAKTGAAFF IASSGAAFLL GSFGGFGGGA GGLFGGGGGG GGGWGAGGGG AGGGGGGDFW YRLISSGAAH ADDKSSGDWD AHGLPVNMTV PLTKLSGLKR
201: YKLSELKFFD RAAASGGAYT GPEDSFFEMV TLQPGGVYTK SQLLKELETL VSCGMFERVD LEVKPKPDNT IGLTVSFVES VWSSAKQFKC INVGLMSQSG
301: QVDFDQDMTE REKMDYLRKQ ERDYQQRVRG ANPCILPENV RGEVLGMMKK QEKVSARMLQ KIRDHVQKWY HNEGFVCAQV VNFGNLNTNE VVCEVVEGDI
401: TKVEYQFQDK LGNIVEGNTQ LAIIDRELPQ QLRPGHIFNI GAGKQALKNI NSLALFSNIE VNPRPDETKE GGIVVEIKLK ELEPKSAEVS TEWSIVPGRE
501: GRPTLASIQP GGTVSFEHRN IYGLNRSIVG SVTSSNLLNP QDDLSFKLEY VHPYLDGVDD RSKNRTFKTS CFNTRKLSPV FVAGPNMDEA PPVWIDRVGF
601: KANITESFTR QSKFTYGLVV EEITTRDETN TVCTHGSRAM PSGGLNMDGP PTTLSGTGVD RMAFLQANIT RDNTEFVNGA IVGDRYIFQL DQGLGIGSKN
701: PFFNRHQLTL TKFINLNKQE KGVGKPLPAV LVLHGHYAGC VGDLPSYDAF ALGGPYSVRG FSNGELGASR NILEVATELR VPVRNTHVYA FVEHGTDLGS
801: SKDVKGNPTE FFRRVGHGSS YGVGVKLGLV RGEYIVDHNA GTGTIFFRFG ERF
101: ETAKTGAAFF IASSGAAFLL GSFGGFGGGA GGLFGGGGGG GGGWGAGGGG AGGGGGGDFW YRLISSGAAH ADDKSSGDWD AHGLPVNMTV PLTKLSGLKR
201: YKLSELKFFD RAAASGGAYT GPEDSFFEMV TLQPGGVYTK SQLLKELETL VSCGMFERVD LEVKPKPDNT IGLTVSFVES VWSSAKQFKC INVGLMSQSG
301: QVDFDQDMTE REKMDYLRKQ ERDYQQRVRG ANPCILPENV RGEVLGMMKK QEKVSARMLQ KIRDHVQKWY HNEGFVCAQV VNFGNLNTNE VVCEVVEGDI
401: TKVEYQFQDK LGNIVEGNTQ LAIIDRELPQ QLRPGHIFNI GAGKQALKNI NSLALFSNIE VNPRPDETKE GGIVVEIKLK ELEPKSAEVS TEWSIVPGRE
501: GRPTLASIQP GGTVSFEHRN IYGLNRSIVG SVTSSNLLNP QDDLSFKLEY VHPYLDGVDD RSKNRTFKTS CFNTRKLSPV FVAGPNMDEA PPVWIDRVGF
601: KANITESFTR QSKFTYGLVV EEITTRDETN TVCTHGSRAM PSGGLNMDGP PTTLSGTGVD RMAFLQANIT RDNTEFVNGA IVGDRYIFQL DQGLGIGSKN
701: PFFNRHQLTL TKFINLNKQE KGVGKPLPAV LVLHGHYAGC VGDLPSYDAF ALGGPYSVRG FSNGELGASR NILEVATELR VPVRNTHVYA FVEHGTDLGS
801: SKDVKGNPTE FFRRVGHGSS YGVGVKLGLV RGEYIVDHNA GTGTIFFRFG ERF
001: MAAFSVNGQL IPTATSSTAS TSLSSRRKFL SPSSSRLPRI STQSPRVPSI KCSKSLPNRD TETSSKDSLL KNLAKPLAVA SVSSAASFFL FRISNLPSVL
101: TGGGGGGDGN FGGFGGGGGG GDGNDGGFWG KLFSPSPAVA DEEQSPDWDS HGLPANIVVQ LNKLSGFKKY KVSDIMFFDR RRQTTIGTED SFFEMVSIRP
201: GGVYTKAQLQ KELETLATCG MFEKVDLEGK TKPDGTLGVT ISFAESTWQS ADRFRCINVG LMVQSKPIEM DSDMTDKEKL EYYRSLEKDY KRRIDRARPC
301: LLPAPVYGEV MQMLRDQGKV SARLLQRIRD RVQKWYHDEG YACAQVVNFG NLNTKEVVCE VVEGDITQLV IQFQDKLGNV VEGNTQVPVV RRELPKQLRQ
401: GYVFNIEAGK KALSNINSLG LFSNIEVNPR PDEKNEGGII VEIKLKELEQ KSAEVSTEWS IVPGRGGAPT LASFQPGGSV TFEHRNLQGL NRSLMGSVTT
501: SNFLNPQDDL SFKLEYVHPY LDGVYNPRNR TFKTSCFNSR KLSPVFTGGP GVEEVPPIWV DRAGVKANIT ENFTRQSKFT YGLVMEEITT RDESSHIAAN
601: GQRLLPSGGI SADGPPTTLS GTGVDRMAFL QANITRDNTK FVNGAVVGQR TVFQVDQGLG IGSKFPFFNR HQLTMTKFIQ LREVEQGAGK SPPPVLVLHG
701: HYGGCVGDLP SYDAFVLGGP YSVRGYNMGE LGAARNIAEV GAEIRIPVKN THVYAFVEHG NDLGSSKDVK GNPTAVYRRT GQGSSYGAGV KLGLVRAEYA
801: VDHNNGTGAL FFRFGERY
101: TGGGGGGDGN FGGFGGGGGG GDGNDGGFWG KLFSPSPAVA DEEQSPDWDS HGLPANIVVQ LNKLSGFKKY KVSDIMFFDR RRQTTIGTED SFFEMVSIRP
201: GGVYTKAQLQ KELETLATCG MFEKVDLEGK TKPDGTLGVT ISFAESTWQS ADRFRCINVG LMVQSKPIEM DSDMTDKEKL EYYRSLEKDY KRRIDRARPC
301: LLPAPVYGEV MQMLRDQGKV SARLLQRIRD RVQKWYHDEG YACAQVVNFG NLNTKEVVCE VVEGDITQLV IQFQDKLGNV VEGNTQVPVV RRELPKQLRQ
401: GYVFNIEAGK KALSNINSLG LFSNIEVNPR PDEKNEGGII VEIKLKELEQ KSAEVSTEWS IVPGRGGAPT LASFQPGGSV TFEHRNLQGL NRSLMGSVTT
501: SNFLNPQDDL SFKLEYVHPY LDGVYNPRNR TFKTSCFNSR KLSPVFTGGP GVEEVPPIWV DRAGVKANIT ENFTRQSKFT YGLVMEEITT RDESSHIAAN
601: GQRLLPSGGI SADGPPTTLS GTGVDRMAFL QANITRDNTK FVNGAVVGQR TVFQVDQGLG IGSKFPFFNR HQLTMTKFIQ LREVEQGAGK SPPPVLVLHG
701: HYGGCVGDLP SYDAFVLGGP YSVRGYNMGE LGAARNIAEV GAEIRIPVKN THVYAFVEHG NDLGSSKDVK GNPTAVYRRT GQGSSYGAGV KLGLVRAEYA
801: VDHNNGTGAL FFRFGERY
Arabidopsis Description
TOC75-3Protein TOC75-3, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9STE8]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.