Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 2
- plastid 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr10P... | Banana | cytosol | 88.5 | 50.09 |
| CDX70592 | Canola | cytosol | 13.42 | 50.0 |
| HORVU4Hr1G022900.2 | Barley | mitochondrion | 54.63 | 42.96 |
| GSMUA_Achr6P15190_001 | Banana | mitochondrion | 85.94 | 36.9 |
| TraesCS4D01G119300.1 | Wheat | cytosol | 68.69 | 35.6 |
| TraesCS4D01G209900.1 | Wheat | plastid | 78.59 | 30.45 |
| TraesCS4A01G095300.1 | Wheat | golgi, plastid | 78.59 | 30.41 |
| TraesCS4B01G209200.1 | Wheat | plastid, unclear | 78.59 | 30.37 |
| HORVU4Hr1G060190.1 | Barley | plastid | 78.59 | 30.33 |
| CDX78609 | Canola | extracellular | 14.06 | 29.33 |
| EER95112 | Sorghum | plastid | 79.23 | 29.18 |
| KXG36538 | Sorghum | nucleus | 73.48 | 28.93 |
| Zm00001d028586_P001 | Maize | plastid | 78.59 | 28.87 |
| Zm00001d047828_P001 | Maize | plasma membrane | 78.59 | 28.84 |
| TraesCS4A01G194000.1 | Wheat | plastid | 69.01 | 28.5 |
| Bra006282.1-P | Field mustard | plasma membrane | 14.06 | 19.05 |
| GSMUA_Achr9P10370_001 | Banana | cytosol | 13.74 | 11.94 |
| GSMUA_Achr6P31130_001 | Banana | cytosol | 13.42 | 11.67 |
| GSMUA_Achr9P19020_001 | Banana | plastid | 16.29 | 7.66 |
| GSMUA_Achr9P03850_001 | Banana | nucleus, peroxisome, plastid | 4.79 | 6.44 |
| Os12t0115950-00 | Rice | nucleus, plasma membrane | 1.28 | 1.65 |
| GSMUA_Achr9P03830_001 | Banana | cytosol | 0.0 | 0.0 |
Protein Annotations
| EnsemblPlants:GSMUA_Achr9P03840_001 | EnsemblPlants:GSMUA_Achr9T03840_001 | EnsemblPlantsGene:GSMUA_Achr9G03840_001 | PANTHER:PTHR12815 | PANTHER:PTHR12815:SF18 | UniParc:UPI000296B143 |
| UniProt:M0TX93 | MapMan:23.1.2.1 | : | : | : | : |
Description
Protein TOC75-3, chloroplastic [Source:GMGC_GENE;Acc:GSMUA_Achr9G03840_001]
Coordinates
chr9:+:2618021..2620250
Molecular Weight (calculated)
34263.7 Da
IEP (calculated)
6.949
GRAVY (calculated)
-0.301
Length
313 amino acids
Sequence
(BLAST)
(BLAST)
001: MEAGKQALRN INSLSLFSNI EVNPRPDEKN EGGIIVEIKL KELEQKSAEV STEWNIVPGH NGRPTLASIQ PGGTVSFEHR NINGLNRSIV GSVTSTNLLN
101: PQDDLSFKLE YVHPYVDGVT NPRNWTFRAS CFNSRKLSPV FTGGPGVDEV PPVWIDRVGL KANITENFTR QSKFTYGHVM EEITMLDETS SICTHGVRAL
201: PNGGLSMNGP PTTLSGTGID RMAFARANIT RDNTKFINGA IVGQRDVFQL DQGLGIGSNF PFFNRHQLTL TCFVPLKQVE EGVGKSPPPV LVLHGHYGGC
301: VGDLPSYDAF TLR
101: PQDDLSFKLE YVHPYVDGVT NPRNWTFRAS CFNSRKLSPV FTGGPGVDEV PPVWIDRVGL KANITENFTR QSKFTYGHVM EEITMLDETS SICTHGVRAL
201: PNGGLSMNGP PTTLSGTGID RMAFARANIT RDNTKFINGA IVGQRDVFQL DQGLGIGSNF PFFNRHQLTL TCFVPLKQVE EGVGKSPPPV LVLHGHYGGC
301: VGDLPSYDAF TLR
001: MAAFSVNGQL IPTATSSTAS TSLSSRRKFL SPSSSRLPRI STQSPRVPSI KCSKSLPNRD TETSSKDSLL KNLAKPLAVA SVSSAASFFL FRISNLPSVL
101: TGGGGGGDGN FGGFGGGGGG GDGNDGGFWG KLFSPSPAVA DEEQSPDWDS HGLPANIVVQ LNKLSGFKKY KVSDIMFFDR RRQTTIGTED SFFEMVSIRP
201: GGVYTKAQLQ KELETLATCG MFEKVDLEGK TKPDGTLGVT ISFAESTWQS ADRFRCINVG LMVQSKPIEM DSDMTDKEKL EYYRSLEKDY KRRIDRARPC
301: LLPAPVYGEV MQMLRDQGKV SARLLQRIRD RVQKWYHDEG YACAQVVNFG NLNTKEVVCE VVEGDITQLV IQFQDKLGNV VEGNTQVPVV RRELPKQLRQ
401: GYVFNIEAGK KALSNINSLG LFSNIEVNPR PDEKNEGGII VEIKLKELEQ KSAEVSTEWS IVPGRGGAPT LASFQPGGSV TFEHRNLQGL NRSLMGSVTT
501: SNFLNPQDDL SFKLEYVHPY LDGVYNPRNR TFKTSCFNSR KLSPVFTGGP GVEEVPPIWV DRAGVKANIT ENFTRQSKFT YGLVMEEITT RDESSHIAAN
601: GQRLLPSGGI SADGPPTTLS GTGVDRMAFL QANITRDNTK FVNGAVVGQR TVFQVDQGLG IGSKFPFFNR HQLTMTKFIQ LREVEQGAGK SPPPVLVLHG
701: HYGGCVGDLP SYDAFVLGGP YSVRGYNMGE LGAARNIAEV GAEIRIPVKN THVYAFVEHG NDLGSSKDVK GNPTAVYRRT GQGSSYGAGV KLGLVRAEYA
801: VDHNNGTGAL FFRFGERY
101: TGGGGGGDGN FGGFGGGGGG GDGNDGGFWG KLFSPSPAVA DEEQSPDWDS HGLPANIVVQ LNKLSGFKKY KVSDIMFFDR RRQTTIGTED SFFEMVSIRP
201: GGVYTKAQLQ KELETLATCG MFEKVDLEGK TKPDGTLGVT ISFAESTWQS ADRFRCINVG LMVQSKPIEM DSDMTDKEKL EYYRSLEKDY KRRIDRARPC
301: LLPAPVYGEV MQMLRDQGKV SARLLQRIRD RVQKWYHDEG YACAQVVNFG NLNTKEVVCE VVEGDITQLV IQFQDKLGNV VEGNTQVPVV RRELPKQLRQ
401: GYVFNIEAGK KALSNINSLG LFSNIEVNPR PDEKNEGGII VEIKLKELEQ KSAEVSTEWS IVPGRGGAPT LASFQPGGSV TFEHRNLQGL NRSLMGSVTT
501: SNFLNPQDDL SFKLEYVHPY LDGVYNPRNR TFKTSCFNSR KLSPVFTGGP GVEEVPPIWV DRAGVKANIT ENFTRQSKFT YGLVMEEITT RDESSHIAAN
601: GQRLLPSGGI SADGPPTTLS GTGVDRMAFL QANITRDNTK FVNGAVVGQR TVFQVDQGLG IGSKFPFFNR HQLTMTKFIQ LREVEQGAGK SPPPVLVLHG
701: HYGGCVGDLP SYDAFVLGGP YSVRGYNMGE LGAARNIAEV GAEIRIPVKN THVYAFVEHG NDLGSSKDVK GNPTAVYRRT GQGSSYGAGV KLGLVRAEYA
801: VDHNNGTGAL FFRFGERY
Arabidopsis Description
TOC75-3Protein TOC75-3, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9STE8]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.