Factsheet for GSMUA_Achr9P19020_001

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 6
mitochondrion 3

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX92514	Canola	cytosol	45.95	78.66
HORVU6Hr1G033430.4	Barley	cytosol	64.56	77.62
Os02t0196300-01	Rice	mitochondrion, plasma membrane, plastid	71.92	76.15
TraesCS6D01G153700.1	Wheat	golgi	73.57	74.36
TraesCS6A01G158800.1	Wheat	plastid	73.27	74.28
TraesCS6B01G192500.1	Wheat	mitochondrion	72.67	73.44
EES06452	Sorghum	mitochondrion	71.02	71.78
Zm00001d053664_P001	Maize	plastid	70.27	71.23
VIT_06s0004g01880.t01	Wine grape	plastid	71.92	71.17
Zm00001d015837_P001	Maize	plastid	70.27	70.8
KRH10192	Soybean	plastid	70.27	69.13
KRH23145	Soybean	cytosol, nucleus, plastid	70.87	68.91
Solyc11g062070.1.1	Tomato	plastid	68.62	65.47
Solyc10g079290.1.1	Tomato	plastid	68.02	64.53
CDY58968	Canola	nucleus, plastid	69.52	63.34
Bra002250.1-P	Field mustard	cytosol, plastid	69.82	63.27
PGSC0003DMT400021030	Potato	cytosol, nucleus, peroxisome, plastid	65.62	62.43
AT5G19620.1	Thale cress	plastid	68.32	62.16
CDX92515	Canola	nucleus, plastid	39.04	54.39
GSMUA_Achr9P10370_001	Banana	cytosol	19.82	36.67
GSMUA_Achr6P31130_001	Banana	cytosol	18.92	35.0
GSMUA_Achr10P...	Banana	cytosol	17.12	20.61
GSMUA_Achr9P03850_001	Banana	nucleus, peroxisome, plastid	6.01	17.17
GSMUA_Achr9P03830_001	Banana	cytosol	3.6	17.02
GSMUA_Achr9P03840_001	Banana	cytosol	7.66	16.29
GSMUA_Achr6P15190_001	Banana	mitochondrion	17.72	16.19

Protein Annotations

Gene3D:2.40.160.50	Gene3D:3.10.20.310	MapMan:35.1	InterPro:Bac_surfAg_D15	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0005739	GO:GO:0008150	GO:GO:0009507	GO:GO:0009536
GO:GO:0009658	GO:GO:0009941	GO:GO:0009987	GO:GO:0016020	GO:GO:0016043	GO:GO:0019867
EnsemblPlantsGene:GSMUA_Achr9G19020_001	EnsemblPlants:GSMUA_Achr9P19020_001	EnsemblPlants:GSMUA_Achr9T19020_001	InterPro:IPR034746	UniProt:M0U1K9	PFAM:PF01103
InterPro:POTRA	PFscan:PS51779	PANTHER:PTHR12815	PANTHER:PTHR12815:SF32	UniParc:UPI0002951A6B	SEG:seg

Description

Outer envelope protein of 80 kDa [Source:GMGC_GENE;Acc:GSMUA_Achr9G19020_001]

Coordinates

chr9:-:17316731..17334384

Molecular Weight (calculated)

73092.1 Da

IEP (calculated)

8.907

GRAVY (calculated)

-0.317

Length

666 amino acids

Sequence
(BLAST)

001: MVRNEGIRFV SSSIKIPAAS SWPPSFRPLL HSSLFARHTL SFHLDRAKEA IHRFLTSLPN KWPHPPLLCL SSLAMARPEA EPNPRRHGRE DEERVLISEV
101: LIRNKDGEML EKADLEAAAA GALKSCRPNS ALTVREVQED VHRVIQTGLF SLCMPVAFDT RDGIRLVFQV EPNQEFRGLI CEGANVLPSK ILEDAFRDGY
201: GQIVNIRHLD QVINSINGWY QERGLTGLVS YAEILSGGII RLEISEAEVN NITIRFLDRK TGEPTEGKTK QETILQQLIT KKGQVYSRLQ GKRDVETILT
301: MGIMEDVTII PQPTANPRKV DLVMNLVERP SGGFSAGGGI SSGITSGPLS GLIGSFAYSH RNLFGRNQKL NLSLERGQID SIFRINYTDP WINADNKRTS
401: RTIMVQNSRT PGTLVHGNNQ SDHGGLTIGR VTAGIEYSRP FRPKWSGTVG LIYQRAGARD DKGEPIIKDF YSNPLTASGN AYDEMLIAKL ESVYTDSGDR
501: SSSMFVLNME QGLPFLPEWL YFNRVSARAR QGYELGPARL LLSVSGGHVF GKFSPHEAFA IGGTNSVRGY EEGAVGSGRS YAVGSGEISF GMYGPLEGVL
601: FGDYGSDLGS GPTVPGDPAG ARGKPGSGFG YGIGIRVDSP LGPLRLEYAF NDKNARRFHF GVGYRN

Best Arabidopsis Sequence Match ( AT5G19620.1 )
(BLAST)

001: MHCHNDDVRF SSSSIRIHSP SPKEQHSLLT NLQSCSKTFV SHLSNTRNSL NQMLQSLKNR HTPPPRSVRR PNLPTQMLNS VTQLMIGKSS PISLSLIQST
101: QFNWSESRDE NVETIRGLSS PLLCCASLSL TRPNESTQSV EGKDTVQQQK GHSVSRNAEE RVLISEVLVR TKDGEELERK DLEMEALAAL KACRANSALT
201: IREVQEDVHR IIESGYFCSC TPVAVDTRDG IRLMFQVEPN QEFRGLVCEN ANVLPSKFIH EAFRDGFGKV INIKRLEEAI TSINGWYMER GLFGIVSDID
301: TLSGGIVRLQ VAEAEVNNIS IRFLDRKTGE PTKGKTSPET ILRQLTTKKG QVYSMLQGKR DVDTVLAMGI MEDVSIIPQP AGDSGKVDLI MNCVERPSGG
401: FSAGGGISSG ITSGPLSGLI GSFAYSHRNL FGRNQKLNVS LERGQIDSIF RINYTDPWIE GDDKRTSRSI MVQNSRTPGN LVHGNQPDNS SLTIGRVTAG
501: VEYSRPFRPK WNGTAGLIFQ HAGARDEQGN PIIKDFYSSP LTASGKPHDE TMLAKLESIY TGSGDQGSTM FAFNMEQGLP VLPEWLCFNR VTGRARKGIH
601: IGPARFLFSL SGGHVVGKFS PHEAFVIGGT NSVRGYEEGA VGSGRSYVVG SGELSFPVRG PVEGVIFTDY GTDMGSGSTV PGDPAGARLK PGSGYGYGLG
701: VRVDSPLGPL RLEYAFNDQH AGRFHFGVGL RN

Arabidopsis Description

OEP80Outer envelope protein 80, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9C5J8]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.