Factsheet for GSMUA_Achr9P10370_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 2
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, plastid
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	plastid
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr6P31130_001	Banana	cytosol	84.17	84.17
CDY55302	Canola	cytosol, peroxisome	47.22	66.41
VIT_06s0009g00240.t01	Wine grape	cytosol	64.17	64.17
TraesCS1A01G328200.1	Wheat	plastid	60.0	63.72
TraesCS1B01G342000.1	Wheat	cytosol, nucleus, plastid	63.33	62.98
Os05t0510200-01	Rice	cytosol, nucleus, plasma membrane	63.06	62.88
Zm00001d000311_P003	Maize	cytosol	63.06	62.88
TraesCS1D01G330700.3	Wheat	cytosol, nucleus, plastid	63.06	62.71
KRH26702	Soybean	cytosol	62.22	62.22
AT3G44160.1	Thale cress	cytosol	62.5	62.15
CDX87938	Canola	cytosol	61.39	61.9
KRH22619	Soybean	cytosol	61.67	61.67
Bra034992.1-P	Field mustard	cytosol	61.67	60.99
PGSC0003DMT400007724	Potato	cytosol	60.83	60.83
Solyc11g071890.1.1	Tomato	cytosol, golgi, nucleus	58.61	58.61
EES18465	Sorghum	cytosol	59.72	53.62
HORVU1Hr1G077770.9	Barley	plastid	60.56	51.78
AT3G48620.1	Thale cress	extracellular	41.94	47.04
GSMUA_Achr9P19020_001	Banana	plastid	36.67	19.82
GSMUA_Achr10P...	Banana	cytosol	23.06	15.01
GSMUA_Achr9P03840_001	Banana	cytosol	11.94	13.74
GSMUA_Achr6P15190_001	Banana	mitochondrion	23.06	11.39
GSMUA_Achr9P03850_001	Banana	nucleus, peroxisome, plastid	6.67	10.3
GSMUA_Achr9P03830_001	Banana	cytosol	0.56	1.42

Protein Annotations

EnsemblPlants:GSMUA_Achr9P10370_001	EnsemblPlants:GSMUA_Achr9T10370_001	EnsemblPlantsGene:GSMUA_Achr9G10370_001	Gene3D:2.40.160.50	GO:GO:0005575	GO:GO:0016020
GO:GO:0019867	InterPro:Bac_surfAg_D15	PANTHER:PTHR12815	PANTHER:PTHR12815:SF10	PFAM:PF01103	SEG:seg
UniParc:UPI000295F265	UniProt:M0TZ46	MapMan:19.2.5.2	:	:	:

Description

Putative Outer envelope protein of 80 kDa, chloroplastic [Source:GMGC_GENE;Acc:GSMUA_Achr9G10370_001]

Coordinates

chr9:+:6752662..6756917

Molecular Weight (calculated)

39271.7 Da

IEP (calculated)

8.487

GRAVY (calculated)

-0.153

Length

360 amino acids

Sequence
(BLAST)

001: MGAQKSIHAG KAKIDFNVDL TQKLCGALLL PHIRQSTDPF SQVIARLSIK HPNLFGRNEK LEVLWNKGLD DSNILIAFRR PRPDWTSQQS FTIQFSVTPE
101: TAVHGLPVDH FSHSESGSVN LCRFSAGVDF NEPSTSHWSS TTGIKFEHVH PINNDGHMIS RDVDGFPITS SGSTYDNMVI LKQEAQCAIA SDDSFTRLNF
201: QMEQGLPLLS KWLIFNRFKF VASKGFKLGP TFLVTSLKGG SIVGDMAPYQ AFAIGGIDSV RGYGEGAVGS GRSCLVANSE FTIPVTKELE GAIFMDCGTD
301: LGSSRHVPGN PALRQGKPGF GVGVGYGIRF SSHLGQLRVD YAMNAFRQKT VYFSINSVSS

Best Arabidopsis Sequence Match ( AT3G44160.1 )
(BLAST)

001: MGAQKSIHAG RAKIDVNVDF THKLCTSLMF PAFRDTSSPL SLVIGSLCIK HPNLFGGSEK LDVSWDKGLY DSNVLVAFRR PRPEWRPQQC FFIQHSLSPE
101: IGVHGTPVDN FSRSGSGGVN LSKLALGLDL SEPASSKWSS TTSIKFEHVR PINDDGRAIT RDLDGFPITC SGNTHDSMVV LKQESRFAKA TDQGLSHFSM
201: QIEQGIPVVS KWLIFNRFKF VASKGVRFGP AFLLASLTGG SIVGDMAPYQ AFAIGGLGSV RGYGEGAVGS GRSCLVANTE LALPLNKMTE GTIFLDCGTD
301: LGSSRLVPGN PSMRQGKPGF GYGFGYGLRF KSPLGHLQVD YAINAFNQKT LYFGVTNLAS ST

Arabidopsis Description

At3g44160 [Source:UniProtKB/TrEMBL;Acc:Q5PP51]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.