Factsheet for GSMUA_Achr9P03830_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 3
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, plastid
BaCelLo:	plastid
EpiLoc:	cytosol
MultiLoc:	cytosol
Plant-mPloc:	plastid
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX78609	Canola	extracellular	29.08	27.33
Os12t0115950-00	Rice	nucleus, plasma membrane	42.55	24.69
Bra006282.1-P	Field mustard	plasma membrane	39.72	24.24
GSMUA_Achr10P...	Banana	cytosol	80.85	20.61
GSMUA_Achr6P15190_001	Banana	mitochondrion	83.69	16.19
HORVU4Hr1G022900.2	Barley	mitochondrion	38.3	13.57
TraesCS4D01G119300.1	Wheat	cytosol	52.48	12.25
TraesCS4D01G209900.1	Wheat	plastid	69.5	12.13
TraesCS4B01G209200.1	Wheat	plastid, unclear	69.5	12.1
HORVU4Hr1G060190.1	Barley	plastid	69.5	12.08
TraesCS4A01G095300.1	Wheat	golgi, plastid	68.79	11.99
TraesCS4A01G194000.1	Wheat	plastid	63.83	11.87
EER95112	Sorghum	plastid	70.21	11.65
Zm00001d028586_P001	Maize	plastid	70.21	11.62
Zm00001d047828_P001	Maize	plasma membrane	70.21	11.61
KXG36538	Sorghum	nucleus	58.16	10.31
CDX70592	Canola	cytosol	3.55	5.95
GSMUA_Achr9P19020_001	Banana	plastid	17.02	3.6
GSMUA_Achr9P03850_001	Banana	nucleus, peroxisome, plastid	2.84	1.72
GSMUA_Achr9P10370_001	Banana	cytosol	1.42	0.56
GSMUA_Achr6P31130_001	Banana	cytosol	1.42	0.56
GSMUA_Achr9P03840_001	Banana	cytosol	0.0	0.0

Protein Annotations

EnsemblPlants:GSMUA_Achr9P03830_001	EnsemblPlants:GSMUA_Achr9T03830_001	EnsemblPlantsGene:GSMUA_Achr9G03830_001	Gene3D:3.10.20.310	PANTHER:PTHR12815	PANTHER:PTHR12815:SF18
SEG:seg	UniParc:UPI000295E04B	UniProt:M0TX92	MapMan:35.1	:	:

Description

outer membrane protein, OMP85 family, putative, expressed [Source:GMGC_GENE;Acc:GSMUA_Achr9G03830_001]

Coordinates

chr9:+:2616075..2618002

Molecular Weight (calculated)

16395.0 Da

IEP (calculated)

9.634

GRAVY (calculated)

-0.487

Length

141 amino acids

Sequence
(BLAST)

001: MVSLRPGGVY TKAQLQKELE TLASCGMFER RDYRRRIERS RPCLLPVTVQ REVMQMLREQ GRVTARLLQR IRDRVQKWYH DEGYACAQVV NFGNLNTREV
101: VCEVVEGDIT QLAIQFQDKL GNVCEGNTKL GVIRRELPKQ L

Best Arabidopsis Sequence Match ( AT3G46740.1 )
(BLAST)

001: MAAFSVNGQL IPTATSSTAS TSLSSRRKFL SPSSSRLPRI STQSPRVPSI KCSKSLPNRD TETSSKDSLL KNLAKPLAVA SVSSAASFFL FRISNLPSVL
101: TGGGGGGDGN FGGFGGGGGG GDGNDGGFWG KLFSPSPAVA DEEQSPDWDS HGLPANIVVQ LNKLSGFKKY KVSDIMFFDR RRQTTIGTED SFFEMVSIRP
201: GGVYTKAQLQ KELETLATCG MFEKVDLEGK TKPDGTLGVT ISFAESTWQS ADRFRCINVG LMVQSKPIEM DSDMTDKEKL EYYRSLEKDY KRRIDRARPC
301: LLPAPVYGEV MQMLRDQGKV SARLLQRIRD RVQKWYHDEG YACAQVVNFG NLNTKEVVCE VVEGDITQLV IQFQDKLGNV VEGNTQVPVV RRELPKQLRQ
401: GYVFNIEAGK KALSNINSLG LFSNIEVNPR PDEKNEGGII VEIKLKELEQ KSAEVSTEWS IVPGRGGAPT LASFQPGGSV TFEHRNLQGL NRSLMGSVTT
501: SNFLNPQDDL SFKLEYVHPY LDGVYNPRNR TFKTSCFNSR KLSPVFTGGP GVEEVPPIWV DRAGVKANIT ENFTRQSKFT YGLVMEEITT RDESSHIAAN
601: GQRLLPSGGI SADGPPTTLS GTGVDRMAFL QANITRDNTK FVNGAVVGQR TVFQVDQGLG IGSKFPFFNR HQLTMTKFIQ LREVEQGAGK SPPPVLVLHG
701: HYGGCVGDLP SYDAFVLGGP YSVRGYNMGE LGAARNIAEV GAEIRIPVKN THVYAFVEHG NDLGSSKDVK GNPTAVYRRT GQGSSYGAGV KLGLVRAEYA
801: VDHNNGTGAL FFRFGERY

Arabidopsis Description

TOC75-3Protein TOC75-3, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9STE8]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.