Factsheet for Zm00001d000311_P003

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
mitochondrion 1
plasma membrane 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, plasma membrane
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os05t0510200-01	Rice	cytosol, nucleus, plasma membrane	91.69	91.69
TraesCS1B01G342000.1	Wheat	cytosol, nucleus, plastid	88.09	87.85
TraesCS1D01G330700.3	Wheat	cytosol, nucleus, plastid	87.81	87.57
TraesCS1A01G328200.1	Wheat	plastid	80.33	85.55
EES18465	Sorghum	cytosol	91.41	82.29
HORVU1Hr1G077770.9	Barley	plastid	78.39	67.22
GSMUA_Achr6P31130_001	Banana	cytosol	66.76	66.94
CDY55302	Canola	cytosol, peroxisome	46.54	65.62
KRH26702	Soybean	cytosol	63.99	64.17
PGSC0003DMT400007724	Potato	cytosol	63.43	63.61
KRH22619	Soybean	cytosol	63.43	63.61
VIT_06s0009g00240.t01	Wine grape	cytosol	62.88	63.06
GSMUA_Achr9P10370_001	Banana	cytosol	62.88	63.06
CDX87938	Canola	cytosol	61.77	62.47
Bra034992.1-P	Field mustard	cytosol	62.88	62.36
Solyc11g071890.1.1	Tomato	cytosol, golgi, nucleus	61.77	61.94
AT3G44160.1	Thale cress	cytosol	62.05	61.88
AT3G48620.1	Thale cress	extracellular	41.55	46.73
Zm00001d053664_P001	Maize	plastid	34.35	18.87
Zm00001d015837_P001	Maize	plastid	33.8	18.46
Zm00001d047828_P001	Maize	plasma membrane	22.99	9.73
Zm00001d028586_P001	Maize	plastid	22.71	9.62

Protein Annotations

EMBL:BT037692	EnsemblPlants:Zm00001d000311_P003	EnsemblPlants:Zm00001d000311_T003	EnsemblPlantsGene:Zm00001d000311	EntrezGene:100192668	Gene3D:2.40.160.50
GO:GO:0005575	GO:GO:0016020	GO:GO:0019867	InterPro:Bac_surfAg_D15	PANTHER:PTHR12815	PANTHER:PTHR12815:SF10
PFAM:PF01103	SEG:seg	UniParc:UPI00017B69F3	UniProt:B4FKQ4	MapMan:19.2.5.2	:

Description

Outer membrane OMP85 family protein

Coordinates

chrB73V4_ctg51:-:18680..23527

Molecular Weight (calculated)

38945.7 Da

IEP (calculated)

8.982

GRAVY (calculated)

-0.120

Length

361 amino acids

Sequence
(BLAST)

001: MGAQQSVNAG KAKVDMKVDL THMLCEALLL PPLRSSGVTL SQIVGRISLK HPNLFGRSEK LDVILDKGIN DSNFVIAYRR PRAEWLSQQS FVFQHSMTPE
101: VAVHGFPADN FTRSGSRGIN LSRLSFGLEL NEPATSNWTS GTSVKFENIR PVNNQGHSIA RDHDGFPLTC SGNLHDNMII LKQESGYADV NDNSFLKVNF
201: QMEQGLPLVP KSLTFNRVKC AVSKGIKLGP TFLVTSLTGG SIVGDMAPYQ AFAIGGLGSV RGYGEGAVGS GRLCLIANCE YTIPLVKHLE GSIFMDCGSD
301: LGSARHVPGN PALRQGKPGF GIGFGYGLHF NTDLGQIRVD YAMNAFNRKT IYFGINSSGG S

Best Arabidopsis Sequence Match ( AT3G44160.1 )
(BLAST)

001: MGAQKSIHAG RAKIDVNVDF THKLCTSLMF PAFRDTSSPL SLVIGSLCIK HPNLFGGSEK LDVSWDKGLY DSNVLVAFRR PRPEWRPQQC FFIQHSLSPE
101: IGVHGTPVDN FSRSGSGGVN LSKLALGLDL SEPASSKWSS TTSIKFEHVR PINDDGRAIT RDLDGFPITC SGNTHDSMVV LKQESRFAKA TDQGLSHFSM
201: QIEQGIPVVS KWLIFNRFKF VASKGVRFGP AFLLASLTGG SIVGDMAPYQ AFAIGGLGSV RGYGEGAVGS GRSCLVANTE LALPLNKMTE GTIFLDCGTD
301: LGSSRLVPGN PSMRQGKPGF GYGFGYGLRF KSPLGHLQVD YAINAFNQKT LYFGVTNLAS ST

Arabidopsis Description

At3g44160 [Source:UniProtKB/TrEMBL;Acc:Q5PP51]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.