Factsheet for TraesCS1B01G342000.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid, nucleus, cytosol

Predictor Summary:

cytosol 1
mitochondrion 1
nucleus 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, nucleus, plastid
Any Predictor:	cytosol, nucleus, plastid
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1D01G330700.3	Wheat	cytosol, nucleus, plastid	99.72	99.72
TraesCS1A01G328200.1	Wheat	plastid	91.16	97.35
Os05t0510200-01	Rice	cytosol, nucleus, plasma membrane	89.78	90.03
Zm00001d000311_P003	Maize	cytosol	87.85	88.09
EES18465	Sorghum	cytosol	85.08	76.81
HORVU1Hr1G077770.9	Barley	plastid	85.91	73.87
GSMUA_Achr6P31130_001	Banana	cytosol	66.02	66.39
GSMUA_Achr9P10370_001	Banana	cytosol	62.98	63.33
CDY55302	Canola	cytosol, peroxisome	44.48	62.89
KRH26702	Soybean	cytosol	62.43	62.78
KRH22619	Soybean	cytosol	61.88	62.22
CDX87938	Canola	cytosol	60.77	61.62
Bra034992.1-P	Field mustard	cytosol	61.88	61.54
VIT_06s0009g00240.t01	Wine grape	cytosol	61.05	61.39
AT3G44160.1	Thale cress	cytosol	61.33	61.33
PGSC0003DMT400007724	Potato	cytosol	60.5	60.83
Solyc11g071890.1.1	Tomato	cytosol, golgi, nucleus	58.84	59.17
AT3G48620.1	Thale cress	extracellular	38.95	43.93
TraesCS6B01G192500.1	Wheat	mitochondrion	33.43	18.36
TraesCS4B01G209200.1	Wheat	plastid, unclear	22.93	10.25

Protein Annotations

EnsemblPlants:TraesCS1B01G342000.1	EnsemblPlantsGene:TraesCS1B01G342000	Gene3D:2.40.160.50	GO:GO:0005575	GO:GO:0016020	GO:GO:0019867
InterPro:Bac_surfAg_D15	PANTHER:PTHR12815	PANTHER:PTHR12815:SF10	PFAM:PF01103	SEG:seg	MapMan:19.2.5.2

Description

No Description!

Coordinates

chr1B:-:570025854..570030692

Molecular Weight (calculated)

38808.5 Da

IEP (calculated)

8.997

GRAVY (calculated)

-0.105

Length

362 amino acids

Sequence
(BLAST)

001: MGAQQSVNAG KAKVDLHVDL THMLCEALLL PPLSSSSATI SQIVGRISLK HPSLFGRSEK LDVILDKGVN DSNVVVAFRR PRPEWLSQQS FVIQHSMTPE
101: IAVHGFPADN FTRSGSRGVN LSRLSLGVEI NEPTTSKWTS GTSVKFEHIR PVNNDGRSIA RDHEGFPLTC SGNLHDNMII LKQESGYADV KDNSFLRVNF
201: QMEQGLPLVP KSLTFNRVKC AVSKGIKLGP TFLVTSLTGG SIVGDMAPYQ AFAIGGLGSV RGYGEGAVGS GRLCLIGNCE YTVPLAKNLE GSLFMDCGSD
301: LGSARHVPGN PALRQGKPGF GVGFGYGVHF NTDIGQIRVD YAMNAFSRKT FYFSINTGGA GS

Best Arabidopsis Sequence Match ( AT3G44160.1 )
(BLAST)

001: MGAQKSIHAG RAKIDVNVDF THKLCTSLMF PAFRDTSSPL SLVIGSLCIK HPNLFGGSEK LDVSWDKGLY DSNVLVAFRR PRPEWRPQQC FFIQHSLSPE
101: IGVHGTPVDN FSRSGSGGVN LSKLALGLDL SEPASSKWSS TTSIKFEHVR PINDDGRAIT RDLDGFPITC SGNTHDSMVV LKQESRFAKA TDQGLSHFSM
201: QIEQGIPVVS KWLIFNRFKF VASKGVRFGP AFLLASLTGG SIVGDMAPYQ AFAIGGLGSV RGYGEGAVGS GRSCLVANTE LALPLNKMTE GTIFLDCGTD
301: LGSSRLVPGN PSMRQGKPGF GYGFGYGLRF KSPLGHLQVD YAINAFNQKT LYFGVTNLAS ST

Arabidopsis Description

At3g44160 [Source:UniProtKB/TrEMBL;Acc:Q5PP51]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.