Factsheet for HORVU1Hr1G077770.9

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	mitochondrion, plastid
iPSORT:	plastid
MultiLoc:	mitochondrion
TargetP:	plastid
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1A01G328200.1	Wheat	plastid	73.63	91.45
TraesCS1B01G342000.1	Wheat	cytosol, nucleus, plastid	73.87	85.91
TraesCS1D01G330700.3	Wheat	cytosol, nucleus, plastid	73.63	85.64
Os05t0510200-01	Rice	cytosol, nucleus, plasma membrane	68.65	80.06
Zm00001d000311_P003	Maize	cytosol	67.22	78.39
EES18465	Sorghum	cytosol	64.61	67.83
GSMUA_Achr6P31130_001	Banana	cytosol	54.16	63.33
CDY55302	Canola	cytosol, peroxisome	37.77	62.11
GSMUA_Achr9P10370_001	Banana	cytosol	51.78	60.56
VIT_06s0009g00240.t01	Wine grape	cytosol	48.93	57.22
CDX87938	Canola	cytosol	48.46	57.14
KRH26702	Soybean	cytosol	48.46	56.67
AT3G44160.1	Thale cress	cytosol	48.69	56.63
PGSC0003DMT400007724	Potato	cytosol	47.98	56.11
KRH22619	Soybean	cytosol	47.74	55.83
Solyc11g071890.1.1	Tomato	cytosol, golgi, nucleus	47.74	55.83
Bra034992.1-P	Field mustard	cytosol	48.22	55.77
AT3G48620.1	Thale cress	extracellular	33.25	43.61
HORVU6Hr1G033430.4	Barley	cytosol	26.37	20.04
HORVU4Hr1G022900.2	Barley	mitochondrion	17.1	18.09
HORVU4Hr1G060190.1	Barley	plastid	22.57	11.71

Protein Annotations

EnsemblPlants:HORVU1Hr1G077770.9	EnsemblPlantsGene:HORVU1Hr1G077770	Gene3D:2.40.160.50	GO:GO:0005575	GO:GO:0016020	GO:GO:0019867
InterPro:Bac_surfAg_D15	PANTHER:PTHR12815	PANTHER:PTHR12815:SF10	PFAM:PF01103	SEG:seg	UniParc:UPI000B47E531
UniProt:A0A287GCD7	MapMan:19.2.5.2	:	:	:	:

Description

No Description!

Coordinates

chrchr1H:-:518523745..518529381

Molecular Weight (calculated)

45088.8 Da

IEP (calculated)

9.733

GRAVY (calculated)

-0.256

Length

421 amino acids

Sequence
(BLAST)

001: RCGGSPTEAI PLRRPLPPPH ARHPTSHSKI PHTPPHPTRD ATPPHEPGRL PAPPASAAMG AQQSVNAGKA KVDLHVDLTH MLCEALLLPP LSSSATISQI
101: VGRFSISLKH PSLFGRSEKL DVVLDKGVND SNVVVAFRRP RPEWLSQQSF VIQHSMTPEV AVHGFPADNF TRSGSRGVNL SRLSLGVEIN EPTTSNWTSG
201: TSVKFEHIRP VNNDGRSISR DHDGFPLTCS GNLHDNMIIL KQESGYADVK DNSFLRVNFQ MEQGLPLVPK SLTFNRVKCT VSKGIKLGPT FLVTSLTGGS
301: IVGDMAPYQA FAIGGLGSVR GYGEGAVGSG RLCLIGNCEY TVPLAKNLEG SLFMDRGSDL GSARHVPGNP ALRQGKPGFG VGFGYGVHFN TDIGQIRVDY
401: AMNAFSRKTF YFSINSGGAG S

Best Arabidopsis Sequence Match ( AT3G44160.1 )
(BLAST)

001: MGAQKSIHAG RAKIDVNVDF THKLCTSLMF PAFRDTSSPL SLVIGSLCIK HPNLFGGSEK LDVSWDKGLY DSNVLVAFRR PRPEWRPQQC FFIQHSLSPE
101: IGVHGTPVDN FSRSGSGGVN LSKLALGLDL SEPASSKWSS TTSIKFEHVR PINDDGRAIT RDLDGFPITC SGNTHDSMVV LKQESRFAKA TDQGLSHFSM
201: QIEQGIPVVS KWLIFNRFKF VASKGVRFGP AFLLASLTGG SIVGDMAPYQ AFAIGGLGSV RGYGEGAVGS GRSCLVANTE LALPLNKMTE GTIFLDCGTD
301: LGSSRLVPGN PSMRQGKPGF GYGFGYGLRF KSPLGHLQVD YAINAFNQKT LYFGVTNLAS ST

Arabidopsis Description

At3g44160 [Source:UniProtKB/TrEMBL;Acc:Q5PP51]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.