Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
| Predictors | GFP | MS/MS | Papers | ||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Os02t0196300-01 | Rice | mitochondrion, plasma membrane, plastid | 91.34 | 80.45 |
| TraesCS6A01G158800.1 | Wheat | plastid | 95.13 | 80.21 |
| TraesCS6B01G192500.1 | Wheat | mitochondrion | 95.31 | 80.12 |
| TraesCS6D01G153700.1 | Wheat | golgi | 94.95 | 79.82 |
| EES06452 | Sorghum | mitochondrion | 89.53 | 75.27 |
| Zm00001d053664_P001 | Maize | plastid | 88.45 | 74.58 |
| Zm00001d015837_P001 | Maize | plastid | 88.81 | 74.43 |
| CDX92514 | Canola | cytosol | 47.47 | 67.61 |
| GSMUA_Achr9P19020_001 | Banana | plastid | 77.62 | 64.56 |
| VIT_06s0004g01880.t01 | Wine grape | plastid | 73.65 | 60.62 |
| KRH10192 | Soybean | plastid | 73.1 | 59.82 |
| KRH23145 | Soybean | cytosol, nucleus, plastid | 73.1 | 59.12 |
| Solyc11g062070.1.1 | Tomato | plastid | 71.48 | 56.73 |
| Solyc10g079290.1.1 | Tomato | plastid | 70.58 | 55.7 |
| CDY58968 | Canola | nucleus, plastid | 72.74 | 55.13 |
| Bra002250.1-P | Field mustard | cytosol, plastid | 72.74 | 54.83 |
| AT5G19620.1 | Thale cress | plastid | 72.38 | 54.78 |
| PGSC0003DMT400021030 | Potato | cytosol, nucleus, peroxisome, plastid | 67.15 | 53.14 |
| CDX92515 | Canola | nucleus, plastid | 43.32 | 50.21 |
| HORVU1Hr1G077770.9 | Barley | plastid | 20.04 | 26.37 |
| HORVU4Hr1G022900.2 | Barley | mitochondrion | 14.08 | 19.6 |
| HORVU4Hr1G060190.1 | Barley | plastid | 17.69 | 12.08 |
Protein Annotations
| Gene3D:2.40.160.50 | Gene3D:3.10.20.310 | MapMan:35.1 | UniProt:A0A287TVY4 | InterPro:Bac_surfAg_D15 | InterPro:BamA/TamA_POTRA |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005739 | GO:GO:0008150 |
| GO:GO:0009507 | GO:GO:0009536 | GO:GO:0009658 | GO:GO:0009941 | GO:GO:0009987 | GO:GO:0016020 |
| GO:GO:0016043 | GO:GO:0019867 | EnsemblPlantsGene:HORVU6Hr1G033430 | EnsemblPlants:HORVU6Hr1G033430.4 | InterPro:IPR034746 | PFAM:PF01103 |
| PFAM:PF07244 | InterPro:POTRA | PFscan:PS51779 | PANTHER:PTHR12815 | PANTHER:PTHR12815:SF32 | UniParc:UPI000B48351A |
| SEG:seg | : | : | : | : | : |
Description
No Description!
Coordinates
chrchr6H:-:152362629..152371220
Molecular Weight (calculated)
60478.6 Da
IEP (calculated)
6.007
GRAVY (calculated)
-0.327
Length
554 amino acids
Sequence
(BLAST)
(BLAST)
001: GEERVLISEV AVRGKDGEPL ERPELEEAAA AALRACRPNA ALTVREVQED VHRVVESGLF RSCMPVAVDT RDGIRLVFEV EPNQDFHGLV CEGANMLPSK
101: FLDDSFRDRH GKIINIRHLD QVIKSINGWY QERGLTGMVS YAEILSGGIL RLQVSEAEVN NINIRFLDRR TGEPTTGKTK PETILQQLTT KKGQAYNRAQ
201: VKRDVETILT MGIMEDVTII PQPVGDSNKV DLVMNLVERK SGGFSAGGGI SSGITNGPLS GLIGSFAYSQ RNVFGRNKKL NLSLERGQID SIFRLNYTDP
301: WIDGDNKRTS RTVMVQNSRT PGTLIHGGEH PDHSPITIGR ITAGIEYSRP FRPKWSGTLG LIFQHAGARD DKGNPMIRDF YNSQLTASGN PYDDTLLAKL
401: ESVYTDSGDH SSTMFVFNVE QGLPILPEWL SFNRVTARLR QSYEIGPARL LLSASGGHVE GNFSPHEAFA IGGTNSVRGY EEGAVGSGRS YAVGSGEVSC
501: RLFGPLEGVV FGDYGSDLGS GPTVPGVTQQ EPAGSQEVVT GMVLVSVWTP RWDL
101: FLDDSFRDRH GKIINIRHLD QVIKSINGWY QERGLTGMVS YAEILSGGIL RLQVSEAEVN NINIRFLDRR TGEPTTGKTK PETILQQLTT KKGQAYNRAQ
201: VKRDVETILT MGIMEDVTII PQPVGDSNKV DLVMNLVERK SGGFSAGGGI SSGITNGPLS GLIGSFAYSQ RNVFGRNKKL NLSLERGQID SIFRLNYTDP
301: WIDGDNKRTS RTVMVQNSRT PGTLIHGGEH PDHSPITIGR ITAGIEYSRP FRPKWSGTLG LIFQHAGARD DKGNPMIRDF YNSQLTASGN PYDDTLLAKL
401: ESVYTDSGDH SSTMFVFNVE QGLPILPEWL SFNRVTARLR QSYEIGPARL LLSASGGHVE GNFSPHEAFA IGGTNSVRGY EEGAVGSGRS YAVGSGEVSC
501: RLFGPLEGVV FGDYGSDLGS GPTVPGVTQQ EPAGSQEVVT GMVLVSVWTP RWDL
001: MHCHNDDVRF SSSSIRIHSP SPKEQHSLLT NLQSCSKTFV SHLSNTRNSL NQMLQSLKNR HTPPPRSVRR PNLPTQMLNS VTQLMIGKSS PISLSLIQST
101: QFNWSESRDE NVETIRGLSS PLLCCASLSL TRPNESTQSV EGKDTVQQQK GHSVSRNAEE RVLISEVLVR TKDGEELERK DLEMEALAAL KACRANSALT
201: IREVQEDVHR IIESGYFCSC TPVAVDTRDG IRLMFQVEPN QEFRGLVCEN ANVLPSKFIH EAFRDGFGKV INIKRLEEAI TSINGWYMER GLFGIVSDID
301: TLSGGIVRLQ VAEAEVNNIS IRFLDRKTGE PTKGKTSPET ILRQLTTKKG QVYSMLQGKR DVDTVLAMGI MEDVSIIPQP AGDSGKVDLI MNCVERPSGG
401: FSAGGGISSG ITSGPLSGLI GSFAYSHRNL FGRNQKLNVS LERGQIDSIF RINYTDPWIE GDDKRTSRSI MVQNSRTPGN LVHGNQPDNS SLTIGRVTAG
501: VEYSRPFRPK WNGTAGLIFQ HAGARDEQGN PIIKDFYSSP LTASGKPHDE TMLAKLESIY TGSGDQGSTM FAFNMEQGLP VLPEWLCFNR VTGRARKGIH
601: IGPARFLFSL SGGHVVGKFS PHEAFVIGGT NSVRGYEEGA VGSGRSYVVG SGELSFPVRG PVEGVIFTDY GTDMGSGSTV PGDPAGARLK PGSGYGYGLG
701: VRVDSPLGPL RLEYAFNDQH AGRFHFGVGL RN
101: QFNWSESRDE NVETIRGLSS PLLCCASLSL TRPNESTQSV EGKDTVQQQK GHSVSRNAEE RVLISEVLVR TKDGEELERK DLEMEALAAL KACRANSALT
201: IREVQEDVHR IIESGYFCSC TPVAVDTRDG IRLMFQVEPN QEFRGLVCEN ANVLPSKFIH EAFRDGFGKV INIKRLEEAI TSINGWYMER GLFGIVSDID
301: TLSGGIVRLQ VAEAEVNNIS IRFLDRKTGE PTKGKTSPET ILRQLTTKKG QVYSMLQGKR DVDTVLAMGI MEDVSIIPQP AGDSGKVDLI MNCVERPSGG
401: FSAGGGISSG ITSGPLSGLI GSFAYSHRNL FGRNQKLNVS LERGQIDSIF RINYTDPWIE GDDKRTSRSI MVQNSRTPGN LVHGNQPDNS SLTIGRVTAG
501: VEYSRPFRPK WNGTAGLIFQ HAGARDEQGN PIIKDFYSSP LTASGKPHDE TMLAKLESIY TGSGDQGSTM FAFNMEQGLP VLPEWLCFNR VTGRARKGIH
601: IGPARFLFSL SGGHVVGKFS PHEAFVIGGT NSVRGYEEGA VGSGRSYVVG SGELSFPVRG PVEGVIFTDY GTDMGSGSTV PGDPAGARLK PGSGYGYGLG
701: VRVDSPLGPL RLEYAFNDQH AGRFHFGVGL RN
Arabidopsis Description
OEP80Outer envelope protein 80, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9C5J8]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.