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Thale cress
Subcellular Localization
min:
: max

 
Winner_takes_all: plastid

Predictor Summary:
  • plastid 5
  • nucleus 2
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDX92514 Canola cytosol 48.63 91.52
CDY58968 Canola nucleus, plastid 81.97 82.08
CDX92515 Canola nucleus, plastid 53.28 81.59
Bra002250.1-P Field mustard cytosol, plastid 81.83 81.5
VIT_06s0004g01880.t01 Wine grape plastid 66.8 72.66
HORVU6Hr1G033430.4 Barley cytosol 54.78 72.38
KRH10192 Soybean plastid 65.03 70.31
Os02t0196300-01 Rice mitochondrion, plasma membrane, plastid 60.11 69.95
KRH23145 Soybean cytosol, nucleus, plastid 64.75 69.2
GSMUA_Achr9P19020_001 Banana plastid 62.16 68.32
EES06452 Sorghum mitochondrion 61.48 68.29
Solyc11g062070.1.1 Tomato plastid 64.62 67.77
Zm00001d053664_P001 Maize plastid 60.79 67.73
TraesCS6B01G192500.1 Wheat mitochondrion 60.66 67.37
Solyc10g079290.1.1 Tomato plastid 64.48 67.24
Zm00001d015837_P001 Maize plastid 60.52 67.02
TraesCS6D01G153700.1 Wheat golgi 60.25 66.92
TraesCS6A01G158800.1 Wheat plastid 59.97 66.82
PGSC0003DMT400021030 Potato cytosol, nucleus, peroxisome, plastid 62.02 64.86
AT3G44160.1 Thale cress cytosol 18.72 37.85
AT3G48620.1 Thale cress extracellular 14.34 32.71
AT4G09080.2 Thale cress golgi 11.34 20.39
AT1G35860.1 Thale cress nucleus 10.66 19.55
AT3G46740.1 Thale cress plastid 17.62 15.77
Protein Annotations
Gene3D:2.40.160.50Gene3D:3.10.20.310MapMan:35.1EntrezGene:832082UniProt:A0A178UCU2ProteinID:AED92731.1
EMBL:AF296838EMBL:AF360205ArrayExpress:AT5G19620EnsemblPlantsGene:AT5G19620RefSeq:AT5G19620TAIR:AT5G19620
RefSeq:AT5G19620-TAIR-GEnsemblPlants:AT5G19620.1TAIR:AT5G19620.1EMBL:AY040053Unigene:At.25139InterPro:Bac_surfAg_D15
ncoils:CoilSymbol:EMB213GO:GO:0003674GO:GO:0005575GO:GO:0005622GO:GO:0005623
GO:GO:0005737GO:GO:0005739GO:GO:0008150GO:GO:0009507GO:GO:0009527GO:GO:0009536
GO:GO:0009658GO:GO:0009707GO:GO:0009941GO:GO:0009987GO:GO:0016020GO:GO:0016043
GO:GO:0019867InterPro:IPR034746RefSeq:NP_568378.1ProteinID:OAO91628.1PFAM:PF01103PO:PO:0000013
PO:PO:0000037PO:PO:0000230PO:PO:0000293PO:PO:0001054PO:PO:0001078PO:PO:0001081
PO:PO:0001185PO:PO:0004507PO:PO:0005052PO:PO:0007064PO:PO:0007095PO:PO:0007098
PO:PO:0007103PO:PO:0007115PO:PO:0007123PO:PO:0007611PO:PO:0007616PO:PO:0008019
PO:PO:0009005PO:PO:0009006PO:PO:0009009PO:PO:0009010PO:PO:0009025PO:PO:0009029
PO:PO:0009030PO:PO:0009031PO:PO:0009032PO:PO:0009046PO:PO:0009047PO:PO:0009052
PO:PO:0020030PO:PO:0020038PO:PO:0020100PO:PO:0020137PO:PO:0025022PO:PO:0025281
InterPro:POTRAPFscan:PS51779PANTHER:PTHR12815PANTHER:PTHR12815:SF32UniProt:Q9C5J8UniParc:UPI00000A2C63
SEG:seg:::::
Description
OEP80Outer envelope protein 80, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9C5J8]
Coordinates
chr5:+:6623197..6627894
Molecular Weight (calculated)
79941.0 Da
IEP (calculated)
8.269
GRAVY (calculated)
-0.366
Length
732 amino acids
Sequence
(BLAST)
001: MHCHNDDVRF SSSSIRIHSP SPKEQHSLLT NLQSCSKTFV SHLSNTRNSL NQMLQSLKNR HTPPPRSVRR PNLPTQMLNS VTQLMIGKSS PISLSLIQST
101: QFNWSESRDE NVETIRGLSS PLLCCASLSL TRPNESTQSV EGKDTVQQQK GHSVSRNAEE RVLISEVLVR TKDGEELERK DLEMEALAAL KACRANSALT
201: IREVQEDVHR IIESGYFCSC TPVAVDTRDG IRLMFQVEPN QEFRGLVCEN ANVLPSKFIH EAFRDGFGKV INIKRLEEAI TSINGWYMER GLFGIVSDID
301: TLSGGIVRLQ VAEAEVNNIS IRFLDRKTGE PTKGKTSPET ILRQLTTKKG QVYSMLQGKR DVDTVLAMGI MEDVSIIPQP AGDSGKVDLI MNCVERPSGG
401: FSAGGGISSG ITSGPLSGLI GSFAYSHRNL FGRNQKLNVS LERGQIDSIF RINYTDPWIE GDDKRTSRSI MVQNSRTPGN LVHGNQPDNS SLTIGRVTAG
501: VEYSRPFRPK WNGTAGLIFQ HAGARDEQGN PIIKDFYSSP LTASGKPHDE TMLAKLESIY TGSGDQGSTM FAFNMEQGLP VLPEWLCFNR VTGRARKGIH
601: IGPARFLFSL SGGHVVGKFS PHEAFVIGGT NSVRGYEEGA VGSGRSYVVG SGELSFPVRG PVEGVIFTDY GTDMGSGSTV PGDPAGARLK PGSGYGYGLG
701: VRVDSPLGPL RLEYAFNDQH AGRFHFGVGL RN
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.