Factsheet for Zm00001d053664_P001

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 2
mitochondrion 5

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	mitochondrion, plastid
ChloroP:	plastid
iPSORT:	mitochondrion
MultiLoc:	mitochondrion
PProwler:	mitochondrion
TargetP:	plastid
WoLF PSORT:	mitochondrion
YLoc:	mitochondrion

extracellular: 20408568
plastid: 22065420
plastid: 23198870
plasma membrane: 23508561
plasma membrane: 27341663

msms PMID: 23198870 doi

M Huang, G Friso, K Nishimura, X Qu, PD Olinares, W Majeran, Q Sun, KJ van Wijk

Department of Plant Biology, Cornell University, Ithaca, New York 14853, United States.

msms PMID: 27341663 doi

P Voothuluru, JC Anderson, RE Sharp, SC Peck

Bond Life Sciences Center, University of Missouri, Columbia, MO, 65211, USA., Division of Biochemistry, University of Missouri, Columbia, MO, 65211, USA., Division of Plant Sciences, University of Missouri, Columbia, MO, 65211, USA., Interdisciplinary Plant Group, University of Missouri, Columbia, MO, 65211, USA.

msms PMID: 20408568 doi

W Ma, N Muthreich, C Liao, M Franz-Wachtel, W Schütz, F Zhang, F Hochholdinger, C Li

Department of Plant Nutrition, China Agricultural University, Beijing, PR China.

msms PMID: 22065420 doi

W Majeran, G Friso, Y Asakura, X Qu, M Huang, L Ponnala, KP Watkins, A Barkan, KJ van Wijk

Department of Plant Biology, Cornell University, Ithaca, New York 14853, USA.

msms PMID: 23508561 doi

Z Zhang, P Voothuluru, M Yamaguchi, RE Sharp, SC Peck

Division of Biochemistry, University of Missouri Columbia, MO, USA ; Christopher S. Bond Life Sciences Center, University of Missouri Columbia, MO, USA ; Interdisciplinary Plant Group, University of Missouri Columbia, MO, USA.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES06452	Sorghum	mitochondrion	94.83	94.54
Zm00001d015837_P001	Maize	plastid	91.93	91.38
HORVU6Hr1G033430.4	Barley	cytosol	74.58	88.45
Os02t0196300-01	Rice	mitochondrion, plasma membrane, plastid	83.41	87.12
TraesCS6A01G158800.1	Wheat	plastid	82.5	82.5
TraesCS6B01G192500.1	Wheat	mitochondrion	82.5	82.25
TraesCS6D01G153700.1	Wheat	golgi	82.19	81.94
CDX92514	Canola	cytosol	45.66	77.12
GSMUA_Achr9P19020_001	Banana	plastid	71.23	70.27
VIT_06s0004g01880.t01	Wine grape	plastid	68.65	67.01
KRH10192	Soybean	plastid	66.67	64.7
KRH23145	Soybean	cytosol, nucleus, plastid	66.82	64.09
CDY58968	Canola	nucleus, plastid	69.56	62.52
Solyc11g062070.1.1	Tomato	plastid	66.36	62.46
Solyc10g079290.1.1	Tomato	plastid	66.21	61.97
Bra002250.1-P	Field mustard	cytosol, plastid	69.1	61.77
AT5G19620.1	Thale cress	plastid	67.73	60.79
PGSC0003DMT400021030	Potato	cytosol, nucleus, peroxisome, plastid	63.32	59.43
CDX92515	Canola	nucleus, plastid	38.97	53.56
Zm00001d000311_P003	Maize	cytosol	18.87	34.35
Zm00001d047828_P001	Maize	plasma membrane	19.33	14.89
Zm00001d028586_P001	Maize	plastid	19.18	14.79

Protein Annotations

EMBL:BT034093	EnsemblPlants:Zm00001d053664_P001	EnsemblPlants:Zm00001d053664_T001	EnsemblPlantsGene:Zm00001d053664	EntrezGene:100191859	Gene3D:2.40.160.50
Gene3D:3.10.20.310	GO:GO:0005575	GO:GO:0016020	GO:GO:0019031	GO:GO:0019867	InterPro:Bac_surfAg_D15
InterPro:IPR034746	InterPro:POTRA	PANTHER:PTHR12815	PANTHER:PTHR12815:SF32	PFAM:PF01103	PFscan:PS51779
ProteinID:AQK60068.1	SEG:seg	UniParc:UPI00017B6310	UniProt:B4FAF5	MapMan:35.1	:

Description

Outer envelope protein 80 chloroplastic

Coordinates

chr4:+:238418653..238426106

Molecular Weight (calculated)

70783.1 Da

IEP (calculated)

8.285

GRAVY (calculated)

-0.286

Length

657 amino acids

Sequence
(BLAST)

001: MGCSRHVRFV SSGVKLPSAS APSPFPAPAP ALLSAALPFA HIGRAIDAAA RRLGACLPRV PVARADTAPP PPRRHGKDGG GAEERVLISE VAVRGKDGEP
101: LERPELEAEA AAALRACRPN AALTVREVQE DVHRIVESGL FRSCMPVAVD TRDGIRLVFE VEPNQDFHGL VCEGANLLPS KFLEDAFCVR HGKIINIRHL
201: DQVIKSVNGW YQERGLTGLV SYAEILSGGI LRLEVSEAEV NNISIRFLDR KTGEPTLGKT QPETILRQLT TRKGQAYNRA QVKRDVETIL TMGIMEDVTI
301: IPQPVGDSSK VDLVMNLVER PSGGFSAGGG ISSGITNGPL SGLIGSFAYS HRNVFGRNKK LNLSLERGQI DSIFRLNFTD PWIDGDNKRT SRTVMVQNSR
401: TPGTLVHGGD HPDHGPITIG RVTAGLEYSR PFRPKWSGTL GLIFQHAGAR DDKGNPAIRD FYNSQLTASG HDYDDTLLAK FESIYTDSGD HSSAMFVFSV
501: EQGLPVLPEW LSFNRVTTRL RQGYEIGPAR LLLSASGGHV EGNFPPHEAF AIGGTNSVRG YEEGAVGSGR SYAVGSGEVS CRMFGPLEGV VFGDYGSDLG
601: SGPKVPGDPA GARGKPGSGY GYGVGVRVDS PLGPLRLEYA FNDRQARRFH FGVGYRN

Best Arabidopsis Sequence Match ( AT5G19620.1 )
(BLAST)

001: MHCHNDDVRF SSSSIRIHSP SPKEQHSLLT NLQSCSKTFV SHLSNTRNSL NQMLQSLKNR HTPPPRSVRR PNLPTQMLNS VTQLMIGKSS PISLSLIQST
101: QFNWSESRDE NVETIRGLSS PLLCCASLSL TRPNESTQSV EGKDTVQQQK GHSVSRNAEE RVLISEVLVR TKDGEELERK DLEMEALAAL KACRANSALT
201: IREVQEDVHR IIESGYFCSC TPVAVDTRDG IRLMFQVEPN QEFRGLVCEN ANVLPSKFIH EAFRDGFGKV INIKRLEEAI TSINGWYMER GLFGIVSDID
301: TLSGGIVRLQ VAEAEVNNIS IRFLDRKTGE PTKGKTSPET ILRQLTTKKG QVYSMLQGKR DVDTVLAMGI MEDVSIIPQP AGDSGKVDLI MNCVERPSGG
401: FSAGGGISSG ITSGPLSGLI GSFAYSHRNL FGRNQKLNVS LERGQIDSIF RINYTDPWIE GDDKRTSRSI MVQNSRTPGN LVHGNQPDNS SLTIGRVTAG
501: VEYSRPFRPK WNGTAGLIFQ HAGARDEQGN PIIKDFYSSP LTASGKPHDE TMLAKLESIY TGSGDQGSTM FAFNMEQGLP VLPEWLCFNR VTGRARKGIH
601: IGPARFLFSL SGGHVVGKFS PHEAFVIGGT NSVRGYEEGA VGSGRSYVVG SGELSFPVRG PVEGVIFTDY GTDMGSGSTV PGDPAGARLK PGSGYGYGLG
701: VRVDSPLGPL RLEYAFNDQH AGRFHFGVGL RN

Arabidopsis Description

OEP80Outer envelope protein 80, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9C5J8]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.