Factsheet for Os02t0196300-01

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, plasma membrane, plastid

Predictor Summary:

plastid 2
mitochondrion 5

Predictors

GFP

MS/MS

Papers

plastid: 21433289
plasma membrane: 27800704

msms PMID: 27800704 doi

J Cao, C Yang, L Li, L Jiang, Y Wu, C Wu, Q Bu, G Xia, X Liu, Y Luo, J Liu

Huai'an Institute of Agricultural Sciences, Huai'an, 223001, China., Institute of Analytical Chemistry and Synthetic and Functional Biomolecules Center, College of Chemistry and Molecular Engineering, Peking University, Beijing, 100871, China; and., Northeast Institute of Geography and Agroecology, Key Laboratory of Soybean Molecular Design Breeding, Chinese Academy of Sciences, Harbin, 150081, China., State Key Laboratory of Plant Genomics, Institute of Microbiology, Chinese Academy of Sciences, Beijing, 100101, China.

msms PMID: 21433289 doi

S Reiland, J Grossmann, K Baerenfaller, P Gehrig, A Nunes-Nesi, AR Fernie, W Gruissem, S Baginsky

Department of Biology, Plant Biotechnology, ETH Zurich, Zurich, Switzerland.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU6Hr1G033430.4	Barley	cytosol	80.45	91.34
EES06452	Sorghum	mitochondrion	87.92	83.92
TraesCS6A01G158800.1	Wheat	plastid	87.6	83.87
TraesCS6D01G153700.1	Wheat	golgi	87.76	83.76
TraesCS6B01G192500.1	Wheat	mitochondrion	87.76	83.76
Zm00001d053664_P001	Maize	plastid	87.12	83.41
Zm00001d015837_P001	Maize	plastid	87.6	83.36
CDX92514	Canola	cytosol	48.17	77.89
GSMUA_Achr9P19020_001	Banana	plastid	76.15	71.92
VIT_06s0004g01880.t01	Wine grape	plastid	70.43	65.82
KRH10192	Soybean	plastid	70.59	65.58
KRH23145	Soybean	cytosol, nucleus, plastid	70.91	65.11
Solyc11g062070.1.1	Tomato	plastid	69.48	62.61
Solyc10g079290.1.1	Tomato	plastid	68.36	61.25
CDY58968	Canola	nucleus, plastid	70.91	61.01
Bra002250.1-P	Field mustard	cytosol, plastid	71.07	60.82
AT5G19620.1	Thale cress	plastid	69.95	60.11
PGSC0003DMT400021030	Potato	cytosol, nucleus, peroxisome, plastid	65.5	58.86
CDX92515	Canola	nucleus, plastid	38.95	51.26
Os05t0510200-01	Rice	cytosol, nucleus, plasma membrane	18.6	32.41
Os11t0116500-01	Rice	cytosol	18.6	17.73
Os03t0271200-01	Rice	plastid	19.55	15.06
Os12t0115950-00	Rice	nucleus, plasma membrane	4.61	11.93
Os03t0271300-01	Rice	mitochondrion	7.95	10.66

Protein Annotations

Gene3D:2.40.160.50	Gene3D:3.10.20.310	MapMan:35.1	UniProt:A0A0N7KEV3	ProteinID:BAS77457.1	InterPro:Bac_surfAg_D15
InterPro:BamA/TamA_POTRA	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005739
GO:GO:0008150	GO:GO:0009507	GO:GO:0009527	GO:GO:0009536	GO:GO:0009658	GO:GO:0009707
GO:GO:0009941	GO:GO:0009987	GO:GO:0016020	GO:GO:0016043	GO:GO:0019867	InterPro:IPR034746
EnsemblPlantsGene:Os02g0196300	EnsemblPlants:Os02t0196300-01	PFAM:PF01103	PFAM:PF07244	InterPro:POTRA	PFscan:PS51779
PANTHER:PTHR12815	PANTHER:PTHR12815:SF32	UniParc:UPI0003938820	SEG:seg	:	:

Description

Similar to Outer envelope protein of 80 kDa. (Os02t0196300-01)

Coordinates

chr2:-:5373070..5380161

Molecular Weight (calculated)

68166.1 Da

IEP (calculated)

8.543

GRAVY (calculated)

-0.313

Length

629 amino acids

Sequence
(BLAST)

001: IPFSLFRRRL LLLRIAHGGG NPLLVAAETL NPSSIPAPIA LPRRQKDGGG GGGGEERVLI SEVAVRGKDG EPLERPELEA AAAAALRACR PNAALTVREV
101: QEDVHRVVES GLFRSCMPVA VDTRDGIRLV FEVEPNQDFH GLVCEGANML PSKFLEDAFH DRHGKIINIR HLDQVIKSVN GWYQERGLTG LVSYAEILSG
201: GILRLQVSEA EVNNINIRFL DRRTGEPTVG KTQPETILRH LTTKKGQAYN RAQVKRDVET ILTMGIMEDV TIIPQPVGDS NKVDLVMNLV ERPSGGFSAG
301: GGISSGITNG PLSGLIGSFA YSHRNVFGRN KKLNLSLERG QIDSIFRLNY TDPWIDGDNK RTSRTIMVQN SRTPGTLIHG GDHPDHGPIT IGRVTAGIEY
401: SRPFRPKWSG TLGLIFQHAG ARDDKGNPII RDFYNSQLTA SGNAYDDTLL AKLESVYTDS GDRSSTMFVF NIEQGLPILP EWLSFNRVTA RLRQGYEIGP
501: ARLLLSASGG HVEGNFSPHE AFAIGGTNSV RGYEEGAVGS GRSYAVGSGE VSCRMFGPLE GVVFGDYGSD LSSGPKVPGD PAGARGKPGS GYGYGVGVRV
601: DSPLGPLRLE YAFNDKQARR FHFGVGYRN

Best Arabidopsis Sequence Match ( AT5G19620.1 )
(BLAST)

001: MHCHNDDVRF SSSSIRIHSP SPKEQHSLLT NLQSCSKTFV SHLSNTRNSL NQMLQSLKNR HTPPPRSVRR PNLPTQMLNS VTQLMIGKSS PISLSLIQST
101: QFNWSESRDE NVETIRGLSS PLLCCASLSL TRPNESTQSV EGKDTVQQQK GHSVSRNAEE RVLISEVLVR TKDGEELERK DLEMEALAAL KACRANSALT
201: IREVQEDVHR IIESGYFCSC TPVAVDTRDG IRLMFQVEPN QEFRGLVCEN ANVLPSKFIH EAFRDGFGKV INIKRLEEAI TSINGWYMER GLFGIVSDID
301: TLSGGIVRLQ VAEAEVNNIS IRFLDRKTGE PTKGKTSPET ILRQLTTKKG QVYSMLQGKR DVDTVLAMGI MEDVSIIPQP AGDSGKVDLI MNCVERPSGG
401: FSAGGGISSG ITSGPLSGLI GSFAYSHRNL FGRNQKLNVS LERGQIDSIF RINYTDPWIE GDDKRTSRSI MVQNSRTPGN LVHGNQPDNS SLTIGRVTAG
501: VEYSRPFRPK WNGTAGLIFQ HAGARDEQGN PIIKDFYSSP LTASGKPHDE TMLAKLESIY TGSGDQGSTM FAFNMEQGLP VLPEWLCFNR VTGRARKGIH
601: IGPARFLFSL SGGHVVGKFS PHEAFVIGGT NSVRGYEEGA VGSGRSYVVG SGELSFPVRG PVEGVIFTDY GTDMGSGSTV PGDPAGARLK PGSGYGYGLG
701: VRVDSPLGPL RLEYAFNDQH AGRFHFGVGL RN

Arabidopsis Description

OEP80Outer envelope protein 80, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9C5J8]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.