Factsheet for Os03t0271200-01

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 8
mitochondrion 1

Predictors

GFP

MS/MS

Papers

plastid: 17189339
nucleus: 19621931
plastid: 21433289
plasma membrane: 27800704
plastid: 27992503

msms PMID: 27800704 doi

J Cao, C Yang, L Li, L Jiang, Y Wu, C Wu, Q Bu, G Xia, X Liu, Y Luo, J Liu

Huai'an Institute of Agricultural Sciences, Huai'an, 223001, China., Institute of Analytical Chemistry and Synthetic and Functional Biomolecules Center, College of Chemistry and Molecular Engineering, Peking University, Beijing, 100871, China; and., Northeast Institute of Geography and Agroecology, Key Laboratory of Soybean Molecular Design Breeding, Chinese Academy of Sciences, Harbin, 150081, China., State Key Laboratory of Plant Genomics, Institute of Microbiology, Chinese Academy of Sciences, Beijing, 100101, China.

msms PMID: 27992503 doi

S Xing, X Meng, L Zhou, H Mujahid, C Zhao, Y Zhang, C Wang, Z Peng

Department of Biochemistry, Molecular Biology, Entomology and Plant Pathology, Mississippi State University, Starkville, Mississippi, United States of America., Institute of Food Crops, Jiangsu Academy of Agricultural Sciences, Jiangsu High Quality Rice Research and Development Center, Nanjing Branch of China National Center for Rice Improvement, Nanjing, Jiangsu, China.

msms PMID: 21433289 doi

S Reiland, J Grossmann, K Baerenfaller, P Gehrig, A Nunes-Nesi, AR Fernie, W Gruissem, S Baginsky

Department of Biology, Plant Biotechnology, ETH Zurich, Zurich, Switzerland.

msms PMID: 17189339 doi

T Kleffmann, A von Zychlinski, D Russenberger, M Hirsch-Hoffmann, P Gehrig, W Gruissem, S Baginsky

Institute of Plant Sciences, Eidgenössische Technische Hochschule Zurich, 8092 Zurich, Switzerland.

msms PMID: 19621931 doi

T Aki, S Yanagisawa

Department of Applied Biological Chemistry, The University of Tokyo, Japan.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4D01G209900.1	Wheat	plastid	88.62	89.6
TraesCS4B01G209200.1	Wheat	plastid, unclear	88.74	89.51
TraesCS4A01G095300.1	Wheat	golgi, plastid	88.62	89.49
HORVU4Hr1G060190.1	Barley	plastid	88.62	89.27
EER95112	Sorghum	plastid	85.56	82.24
Zm00001d047828_P001	Maize	plasma membrane	85.43	81.83
Zm00001d028586_P001	Maize	plastid	84.58	81.1
Os11t0116500-01	Rice	cytosol	56.3	69.7
Os12t0115950-00	Rice	nucleus, plasma membrane	13.46	45.27
Os05t0510200-01	Rice	cytosol, nucleus, plasma membrane	9.42	21.33
Os02t0196300-01	Rice	mitochondrion, plasma membrane, plastid	15.06	19.55
Os03t0271300-01	Rice	mitochondrion	7.96	13.86

Protein Annotations

Gene3D:2.40.160.50	MapMan:23.1.2.1	Gene3D:3.10.20.310	EntrezGene:4332389	ProteinID:AAP06869.1	ProteinID:ABF95211.1
EMBL:AK120241	ProteinID:BAF11603.1	ProteinID:BAS83476.1	ProteinID:BAS83477.1	InterPro:Bac_surfAg_D15	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0006810	GO:GO:0008150	GO:GO:0009507
GO:GO:0009527	GO:GO:0009536	GO:GO:0009707	GO:GO:0015031	GO:GO:0016020	GO:GO:0016021
GO:GO:0019867	EnsemblPlantsGene:Os03g0271200	EnsemblPlants:Os03t0271200-01	PFAM:PF01103	PANTHER:PTHR12815	PANTHER:PTHR12815:SF14
UniProt:Q84Q83	UniParc:UPI00005E270B	RefSeq:XP_015630560.1	SEG:seg	:	:

Description

TOC75Similar to Chloroplastic outer envelope membrane protein (OEP75) precursor (Outer membrane protein). (Os03t0271200-01);Similar to Protein TOC75, chloroplastic. (Os03t0271200-02)

Coordinates

chr3:+:9068392..9073951

Molecular Weight (calculated)

87691.8 Da

IEP (calculated)

8.443

GRAVY (calculated)

-0.327

Length

817 amino acids

Sequence
(BLAST)

001: MALTSQSLFF SPLAAGPSRR VRGRGRSTSV SAAASASSHN SQPHGHPQQP LAVASSSSKS ESKGSKTFAL ASAITAAASG AFLLASSGGG FGGGAGGPLG
101: GGGGGWGAGG GGGGGGGGGG GGFWSRIFSG GAAHADEKSS GDWDPHGLPA NINVPMTKLS GLKRYKISEL KFFDRAAGGG GAFTGPEDSF FEMVTLQPGG
201: VYTKSQLLKE LETLVSCGMF ERVDLEGKAK PDGTLGLTVS FVESVWSAAK QFKCINVGLM SQSGQVDFDQ DMTEREKMDY LRKQERDYQQ RVRGAKPCIL
301: PDNVRGEVLG MMKKQEKVSA RLLQRIRDHV QKWYHNEGFV CAQVVNFGNL NTSEVVCEVV EGDITKVEYQ FQDKLGNFVE GNTQIPIIDR ELPQQLRPGH
401: IFNIGAGKQA LKNINSLALF SNIEVNPRPD ETKEGGIVVE IKLKELEPKS AEVSTEWSIV PGREGRPTLA SIQPGGTVSF EHRNIYGLNR SIVGSVTSSN
501: LLNPQDDLSF KLEYVHPYLD GVDDRNKNRT FKTSCFNTRK LSPVFVAGPN MDEAPPVWVD RVGFKANITE SFTRQSKFTY GLVVEEITTR DETNSICTHG
601: SRAMPSGGLS MDGPPTTLSG TGIDRMAFLQ ANITRDNTEF VNGAVIGDRC IFQLDQGLGI GSKNPFFNRH QLTLTKFVNL NKQEKGAGKP LPAVLVLHGH
701: YAGCVGDLPS YDAFTLGGPY SVRGYGMGEL GASRNVLEVA SELRIPVRNT YVYGFVEHGT DLGSSKDVKG NPTEFFRRVG HGSSYGLGVK LGLVRGEYIV
801: DHNAGTGTVF FRFGERF

Best Arabidopsis Sequence Match ( AT3G46740.1 )
(BLAST)

001: MAAFSVNGQL IPTATSSTAS TSLSSRRKFL SPSSSRLPRI STQSPRVPSI KCSKSLPNRD TETSSKDSLL KNLAKPLAVA SVSSAASFFL FRISNLPSVL
101: TGGGGGGDGN FGGFGGGGGG GDGNDGGFWG KLFSPSPAVA DEEQSPDWDS HGLPANIVVQ LNKLSGFKKY KVSDIMFFDR RRQTTIGTED SFFEMVSIRP
201: GGVYTKAQLQ KELETLATCG MFEKVDLEGK TKPDGTLGVT ISFAESTWQS ADRFRCINVG LMVQSKPIEM DSDMTDKEKL EYYRSLEKDY KRRIDRARPC
301: LLPAPVYGEV MQMLRDQGKV SARLLQRIRD RVQKWYHDEG YACAQVVNFG NLNTKEVVCE VVEGDITQLV IQFQDKLGNV VEGNTQVPVV RRELPKQLRQ
401: GYVFNIEAGK KALSNINSLG LFSNIEVNPR PDEKNEGGII VEIKLKELEQ KSAEVSTEWS IVPGRGGAPT LASFQPGGSV TFEHRNLQGL NRSLMGSVTT
501: SNFLNPQDDL SFKLEYVHPY LDGVYNPRNR TFKTSCFNSR KLSPVFTGGP GVEEVPPIWV DRAGVKANIT ENFTRQSKFT YGLVMEEITT RDESSHIAAN
601: GQRLLPSGGI SADGPPTTLS GTGVDRMAFL QANITRDNTK FVNGAVVGQR TVFQVDQGLG IGSKFPFFNR HQLTMTKFIQ LREVEQGAGK SPPPVLVLHG
701: HYGGCVGDLP SYDAFVLGGP YSVRGYNMGE LGAARNIAEV GAEIRIPVKN THVYAFVEHG NDLGSSKDVK GNPTAVYRRT GQGSSYGAGV KLGLVRAEYA
801: VDHNNGTGAL FFRFGERY

Arabidopsis Description

TOC75-3Protein TOC75-3, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9STE8]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.