Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- plastid 3
- mitochondrion 4
- cytosol 1
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Os05t0510200-01 | Rice | cytosol, nucleus, plasma membrane | 8.32 | 10.8 |
| Os11t0116500-01 | Rice | cytosol | 11.94 | 8.48 |
| Os03t0271200-01 | Rice | plastid | 13.86 | 7.96 |
| Os02t0196300-01 | Rice | mitochondrion, plasma membrane, plastid | 10.66 | 7.95 |
| Os12t0115950-00 | Rice | nucleus, plasma membrane | 3.62 | 7.0 |
| Bra018198.1-P | Field mustard | cytosol | 4.26 | 5.78 |
Protein Annotations
| Gene3D:1.25.40.10 | MapMan:35.1 | EntrezGene:4332390 | ProteinID:ABF95212.1 | ProteinID:BAS83478.1 | GO:GO:0003674 |
| GO:GO:0003676 | GO:GO:0003723 | GO:GO:0003824 | GO:GO:0004518 | GO:GO:0004519 | GO:GO:0005488 |
| GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0006139 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009451 | GO:GO:0009987 | GO:GO:0016787 | GO:GO:0043231 | GO:GO:0090305 |
| InterPro:IPR002885 | InterPro:IPR011990 | EnsemblPlantsGene:Os03g0271300 | EnsemblPlants:Os03t0271300-01 | PFAM:PF01535 | PFAM:PF13041 |
| PFscan:PS51375 | PANTHER:PTHR24015 | PANTHER:PTHR24015:SF157 | InterPro:Pentatricopeptide_repeat | UniProt:Q10NF1 | SUPFAM:SSF48452 |
| TIGRFAMs:TIGR00756 | InterPro:TPR-like_helical_dom_sf | UniParc:UPI0000DB459B | RefSeq:XP_015630562.1 | SEG:seg | : |
Description
Similar to Pentatricopeptide repeat protein PPR868-14. (Os03t0271300-01)
Coordinates
chr3:+:9074313..9076182
Molecular Weight (calculated)
50652.7 Da
IEP (calculated)
8.727
GRAVY (calculated)
0.161
Length
469 amino acids
Sequence
(BLAST)
(BLAST)
001: MCPAKTSSWM RQLTSSSRQG HHGDVLRLFF TGVRLQAGSR GTVDPWPGAV PTALRACAHL ADVASGRLIH ALVLTRPALA SDAVAATALL DMYSKCGLVA
101: SARKVFDEMA SRGDPVVWNA LLACYARHGL PEHALALAVK MRGIGLCPDL VTWNIVVSGF ALAGDDLMAG DLVGAMKDDG FQPDVVTWTS RVSGSVLNFQ
201: YGRARALFRA MMVAGGRVLP SSATISTILP AFANVADVKH GKEVHGYSVV AGVEQELTVS SALVDMYAKC GLVLEARRLF DKMPQRSTVT WNSMIFGLAN
301: SGHCQEAVGL FDRMLRDGAK PDHLTFTAVL TACSYGGMVE VGKILYRAMQ VEYGVEPRLE HYACMVHLLG RAGRLDEAYG FIRAMPLEPD RFVWGALLGA
401: CRSHGNIELA ELAASRLLAV EPDNAASCLL LSSALANAGK QDDVFKIKRL VKRRRLKKLD SYSWVETSL
101: SARKVFDEMA SRGDPVVWNA LLACYARHGL PEHALALAVK MRGIGLCPDL VTWNIVVSGF ALAGDDLMAG DLVGAMKDDG FQPDVVTWTS RVSGSVLNFQ
201: YGRARALFRA MMVAGGRVLP SSATISTILP AFANVADVKH GKEVHGYSVV AGVEQELTVS SALVDMYAKC GLVLEARRLF DKMPQRSTVT WNSMIFGLAN
301: SGHCQEAVGL FDRMLRDGAK PDHLTFTAVL TACSYGGMVE VGKILYRAMQ VEYGVEPRLE HYACMVHLLG RAGRLDEAYG FIRAMPLEPD RFVWGALLGA
401: CRSHGNIELA ELAASRLLAV EPDNAASCLL LSSALANAGK QDDVFKIKRL VKRRRLKKLD SYSWVETSL
001: MKKLTIVPSS FRLLSIGSYV ELIEANGRDR LFCRGRVLHA HLVTSGIARL TRIAAKLVTF YVECGKVLDA RKVFDEMPKR DISGCVVMIG ACARNGYYQE
101: SLDFFREMYK DGLKLDAFIV PSLLKASRNL LDREFGKMIH CLVLKFSYES DAFIVSSLID MYSKFGEVGN ARKVFSDLGE QDLVVFNAMI SGYANNSQAD
201: EALNLVKDMK LLGIKPDVIT WNALISGFSH MRNEEKVSEI LELMCLDGYK PDVVSWTSII SGLVHNFQNE KAFDAFKQML THGLYPNSAT IITLLPACTT
301: LAYMKHGKEI HGYSVVTGLE DHGFVRSALL DMYGKCGFIS EAMILFRKTP KKTTVTFNSM IFCYANHGLA DKAVELFDQM EATGEKLDHL TFTAILTACS
401: HAGLTDLGQN LFLLMQNKYR IVPRLEHYAC MVDLLGRAGK LVEAYEMIKA MRMEPDLFVW GALLAACRNH GNMELARIAA KHLAELEPEN SGNGLLLTSL
501: YANAGSWESV VRMKKMIKKK RFRRFLGSSW VETV
101: SLDFFREMYK DGLKLDAFIV PSLLKASRNL LDREFGKMIH CLVLKFSYES DAFIVSSLID MYSKFGEVGN ARKVFSDLGE QDLVVFNAMI SGYANNSQAD
201: EALNLVKDMK LLGIKPDVIT WNALISGFSH MRNEEKVSEI LELMCLDGYK PDVVSWTSII SGLVHNFQNE KAFDAFKQML THGLYPNSAT IITLLPACTT
301: LAYMKHGKEI HGYSVVTGLE DHGFVRSALL DMYGKCGFIS EAMILFRKTP KKTTVTFNSM IFCYANHGLA DKAVELFDQM EATGEKLDHL TFTAILTACS
401: HAGLTDLGQN LFLLMQNKYR IVPRLEHYAC MVDLLGRAGK LVEAYEMIKA MRMEPDLFVW GALLAACRNH GNMELARIAA KHLAELEPEN SGNGLLLTSL
501: YANAGSWESV VRMKKMIKKK RFRRFLGSSW VETV
Arabidopsis Description
PCMP-E1Pentatricopeptide repeat-containing protein At5g59600 [Source:UniProtKB/Swiss-Prot;Acc:Q9FGR2]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.