Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 4
- mitochondrion 3
- nucleus 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH19528 | Soybean | plastid | 20.99 | 89.41 |
| KRH26702 | Soybean | cytosol | 48.62 | 48.89 |
| KRH22619 | Soybean | cytosol | 48.07 | 48.33 |
| KRH10192 | Soybean | plastid | 30.66 | 16.4 |
| KRH23145 | Soybean | cytosol, nucleus, plastid | 30.66 | 16.2 |
| KRH10219 | Soybean | plastid | 19.34 | 8.82 |
| KRH23106 | Soybean | endoplasmic reticulum | 19.34 | 8.75 |
Protein Annotations
| EMBL:ACUP02006096 | EnsemblPlants:KRH32153 | EnsemblPlantsGene:GLYMA_10G034900 | EntrezGene:100820500 | Gene3D:2.40.160.50 | GO:GO:0005575 |
| GO:GO:0016020 | GO:GO:0019867 | InterPro:Bac_surfAg_D15 | PANTHER:PTHR12815 | PANTHER:PTHR12815:SF10 | PFAM:PF01103 |
| ProteinID:KRH32153 | ProteinID:KRH32153.1 | SEG:seg | UniParc:UPI000233C807 | UniProt:K7LH85 | MapMan:19.2.5.2 |
Description
hypothetical protein
Coordinates
chr10:-:3036333..3041422
Molecular Weight (calculated)
39405.3 Da
IEP (calculated)
9.734
GRAVY (calculated)
-0.139
Length
362 amino acids
Sequence
(BLAST)
(BLAST)
001: MGANKSIHTG RSKLDVGVDF TRKLCSSCML SPRRLSSILV SMATGSLRLK HPGLFYFRDL LDMSWHKGLH DSDLLLTYRY HRPLHIGPPS LTIKHSVSPE
101: VGIHGIPMNK FSHSLSRGVR LSKLSIGFDY IAPSESDSSK AKATGVYFKR FHFTHDGGRS ISTDQDGFQL TRSGGPSDNI IVISQESRYE DESDHGFTNF
201: SVQMELGTPI PPILLSYYRF EVSAARGIKL GPTIFFSRMS GGTVMGSFAP YQAFAIGGPS SVRGYGEGAV GVGQSCLVST SELSIPLNKK LTGVIFLDCG
301: SDLWSSYKVP NNPGERRGKP GIGFGIGGGI RFKTPLAQIQ VDYAINAFQQ GTTYFGISDL IL
101: VGIHGIPMNK FSHSLSRGVR LSKLSIGFDY IAPSESDSSK AKATGVYFKR FHFTHDGGRS ISTDQDGFQL TRSGGPSDNI IVISQESRYE DESDHGFTNF
201: SVQMELGTPI PPILLSYYRF EVSAARGIKL GPTIFFSRMS GGTVMGSFAP YQAFAIGGPS SVRGYGEGAV GVGQSCLVST SELSIPLNKK LTGVIFLDCG
301: SDLWSSYKVP NNPGERRGKP GIGFGIGGGI RFKTPLAQIQ VDYAINAFQQ GTTYFGISDL IL
001: MGAQKSIHAG RAKIDVNVDF THKLCTSLMF PAFRDTSSPL SLVIGSLCIK HPNLFGGSEK LDVSWDKGLY DSNVLVAFRR PRPEWRPQQC FFIQHSLSPE
101: IGVHGTPVDN FSRSGSGGVN LSKLALGLDL SEPASSKWSS TTSIKFEHVR PINDDGRAIT RDLDGFPITC SGNTHDSMVV LKQESRFAKA TDQGLSHFSM
201: QIEQGIPVVS KWLIFNRFKF VASKGVRFGP AFLLASLTGG SIVGDMAPYQ AFAIGGLGSV RGYGEGAVGS GRSCLVANTE LALPLNKMTE GTIFLDCGTD
301: LGSSRLVPGN PSMRQGKPGF GYGFGYGLRF KSPLGHLQVD YAINAFNQKT LYFGVTNLAS ST
101: IGVHGTPVDN FSRSGSGGVN LSKLALGLDL SEPASSKWSS TTSIKFEHVR PINDDGRAIT RDLDGFPITC SGNTHDSMVV LKQESRFAKA TDQGLSHFSM
201: QIEQGIPVVS KWLIFNRFKF VASKGVRFGP AFLLASLTGG SIVGDMAPYQ AFAIGGLGSV RGYGEGAVGS GRSCLVANTE LALPLNKMTE GTIFLDCGTD
301: LGSSRLVPGN PSMRQGKPGF GYGFGYGLRF KSPLGHLQVD YAINAFNQKT LYFGVTNLAS ST
Arabidopsis Description
At3g44160 [Source:UniProtKB/TrEMBL;Acc:Q5PP51]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.