Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- plastid 1
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX92471 | Canola | cytosol | 96.55 | 96.55 |
| AT5G20300.4 | Thale cress | cytosol | 82.5 | 81.46 |
| VIT_11s0118g00260.t01 | Wine grape | cytosol, mitochondrion, plastid | 55.04 | 54.01 |
| Solyc07g007650.1.1 | Tomato | cytosol | 36.78 | 53.04 |
| KRH20190 | Soybean | cytosol | 51.98 | 51.2 |
| KRH03616 | Soybean | mitochondrion | 51.98 | 51.13 |
| PGSC0003DMT400078922 | Potato | endoplasmic reticulum | 53.77 | 50.3 |
| GSMUA_Achr1P09910_001 | Banana | mitochondrion | 45.47 | 46.97 |
| CDX97269 | Canola | cytosol | 3.83 | 45.45 |
| Os12t0197400-01 | Rice | mitochondrion | 44.96 | 44.73 |
| EES15811 | Sorghum | mitochondrion | 44.57 | 44.4 |
| Zm00001d035254_P001 | Maize | plastid | 44.32 | 44.26 |
| HORVU5Hr1G031380.1 | Barley | mitochondrion | 43.93 | 43.6 |
| TraesCS5D01G120200.1 | Wheat | mitochondrion | 43.68 | 43.57 |
| TraesCS5A01G112900.1 | Wheat | mitochondrion | 43.55 | 43.49 |
| TraesCS5B01G109100.1 | Wheat | mitochondrion | 43.55 | 43.38 |
| CDX70657 | Canola | cytosol | 13.54 | 36.55 |
| CDY50376 | Canola | cytosol | 30.78 | 34.58 |
| CDX97270 | Canola | cytosol | 19.28 | 34.4 |
| CDX91288 | Canola | cytosol | 31.55 | 31.42 |
| CDX78660 | Canola | cytosol | 25.42 | 30.02 |
| CDX70551 | Canola | cytosol | 13.54 | 29.44 |
| CDY66172 | Canola | cytosol | 35.76 | 28.4 |
| CDY52130 | Canola | cytosol, plastid | 10.6 | 26.52 |
| CDX80936 | Canola | cytosol | 10.47 | 26.2 |
| CDX98810 | Canola | cytosol | 10.47 | 26.2 |
| CDX70641 | Canola | cytosol | 26.56 | 25.94 |
| CDX70658 | Canola | cytosol | 4.21 | 25.78 |
| CDY43117 | Canola | cytosol | 36.14 | 25.63 |
| CDX92086 | Canola | cytosol, endoplasmic reticulum, vacuole | 34.35 | 25.31 |
| CDY32453 | Canola | cytosol | 9.58 | 25.25 |
| CDX89987 | Canola | cytosol | 9.58 | 25.17 |
| CDY15228 | Canola | cytosol | 9.58 | 25.17 |
| CDY55323 | Canola | cytosol | 9.45 | 24.92 |
| CDX92087 | Canola | cytosol | 36.27 | 24.03 |
| CDX70550 | Canola | cytosol | 8.17 | 22.61 |
| CDX70659 | Canola | cytosol | 3.07 | 22.22 |
| CDX70178 | Canola | cytosol | 12.26 | 12.65 |
| CDY44175 | Canola | cytosol | 11.75 | 9.96 |
| CDY22896 | Canola | cytosol | 12.52 | 9.67 |
| CDX98809 | Canola | cytosol | 2.04 | 3.56 |
Protein Annotations
| MapMan:23.1.2.2 | Gene3D:3.40.50.300 | GO:A0A078HG65 | UniProt:A0A078HG65 | EnsemblPlants:CDY35813 | ProteinID:CDY35813 |
| ProteinID:CDY35813.1 | ncoils:Coil | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005525 |
| EnsemblPlantsGene:GSBRNA2T00059317001 | InterPro:G_AIG1 | InterPro:IPR006703 | InterPro:P-loop_NTPase | PFAM:PF04548 | PFAM:PF11886 |
| PFscan:PS51720 | PANTHER:PTHR10903 | PANTHER:PTHR10903:SF68 | SUPFAM:SSF52540 | InterPro:TOC159_MAD | UniParc:UPI0004EEBD0C |
| SEG:seg | : | : | : | : | : |
Description
BnaC09g37450DBnaC09g37450D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HG65]
Coordinates
chrLK032362:+:45243..48686
Molecular Weight (calculated)
87693.9 Da
IEP (calculated)
6.649
GRAVY (calculated)
-0.508
Length
783 amino acids
Sequence
(BLAST)
(BLAST)
001: MKGFIDWVFD LSNSMASSSR PLLGSAPFSR DHEAHDSQSQ DPALPEPVAR SEPPCSTSGD VETHPPISQQ QTPLESLHQS SLDLNDKKHN PLAKIGDLQV
101: QFLRLVQRFG QSQNNILVSK VLYRVYLAML IRAEESELKT VKLKQDKAKT LAKEQESSGV PELDFSIRIL VLGKTGVGKS ATINSIFGQS KSETDAFQPA
201: TDRIEEVNGT VNGVKVTFID TPGLHQPSPS SARKNRKTLL SIKRYVKKRP PDVVLYLDRL DTIDLRYSDY PLLSLITETL GAALWLNTIL VMTHSSVASE
301: GRNMNYESYV GQRMDVVQHY IHQAVSDTKL ENPVLLVENH PSCRKNHAGE CVLPNGLVWK PQFMFLCVCT KVLGDVQSLL RFRDSIGLGQ ASGTRTASLP
401: HLLSVFLRRR LSSGGDEAER EIDELMDSEL EEEEEDEYDQ LPAIRILGKT RFEKLSKSQK REYLDELDYR ETLYLKKQLK EECRRRKDEK LNEEEEEKSD
501: QAAVPLPEMA GPDSFDSDFP SHRYRSIASG DQWLVRPVYD PQGWDHDVGF DGINIETAVK VKKNLFASAN GQVCRDKQRF TIHSETNAAY TTDSKLQTFS
601: VAADVQSSGD DLVYTFHGGT KLKTFKHNTT DLGVGLTSFG GKYYLAGKIE DSLMVGKRVK LTVNAGQMNG SGGTAHGGSF EACIRGRDYP VRNEQIGVTV
701: TALSFNKELV LNWGLQTQVR PSRDTNVDVS VNMNNRKMGK INVKLNSSEH WEIALISAFT LFKALIRRKK AVSEITNENE EEL
101: QFLRLVQRFG QSQNNILVSK VLYRVYLAML IRAEESELKT VKLKQDKAKT LAKEQESSGV PELDFSIRIL VLGKTGVGKS ATINSIFGQS KSETDAFQPA
201: TDRIEEVNGT VNGVKVTFID TPGLHQPSPS SARKNRKTLL SIKRYVKKRP PDVVLYLDRL DTIDLRYSDY PLLSLITETL GAALWLNTIL VMTHSSVASE
301: GRNMNYESYV GQRMDVVQHY IHQAVSDTKL ENPVLLVENH PSCRKNHAGE CVLPNGLVWK PQFMFLCVCT KVLGDVQSLL RFRDSIGLGQ ASGTRTASLP
401: HLLSVFLRRR LSSGGDEAER EIDELMDSEL EEEEEDEYDQ LPAIRILGKT RFEKLSKSQK REYLDELDYR ETLYLKKQLK EECRRRKDEK LNEEEEEKSD
501: QAAVPLPEMA GPDSFDSDFP SHRYRSIASG DQWLVRPVYD PQGWDHDVGF DGINIETAVK VKKNLFASAN GQVCRDKQRF TIHSETNAAY TTDSKLQTFS
601: VAADVQSSGD DLVYTFHGGT KLKTFKHNTT DLGVGLTSFG GKYYLAGKIE DSLMVGKRVK LTVNAGQMNG SGGTAHGGSF EACIRGRDYP VRNEQIGVTV
701: TALSFNKELV LNWGLQTQVR PSRDTNVDVS VNMNNRKMGK INVKLNSSEH WEIALISAFT LFKALIRRKK AVSEITNENE EEL
001: MKGFKDWVFA LSNSMASSRP LLGSDPFFRD PHQEQDNHSQ APAAPQPVTL SEPPCSTSSD LEILPPLSQQ QVPLESLYQS SIDLNGKKHN PLAKIGGLQV
101: QFLRLVQRFG QSQNNILVSK VLYRVHLAML IRAEESELKN VKLRQDRAKA LAREQESSGI PELDFSLRIL VLGKTGVGKS ATINSIFGQP KSETDAFRPG
201: TDRIEEVMGT VSGVKVTFID TPGFHPLSSS STRKNRKILL SIKRYVKKRP PDVVLYLDRL DMIDMRYSDF SLLQLITEIF GAAIWLNTIL VMTHSAATTE
301: GRNGQSVNYE SYVGQRMDVV QHYIHQAVSD TKLENPVLLV ENHPSCKKNL AGEYVLPNGV VWKPQFMFLC VCTKVLGDVQ SLLRFRDSIG LGQPSSTRTA
401: SLPHLLSVFL RRRLSSGADE TEKEIDKLLN LDLEEEDEYD QLPTIRILGK SRFEKLSKSQ KKEYLDELDY RETLYLKKQL KEECRRRRDE KLVEEENLED
501: TEQRDQAAVP LPDMAGPDSF DSDFPAHRYR CVSAGDQWLV RPVYDPQGWD RDVGFDGINI ETAAKINRNL FASATGQVSR DKQRFTIQSE TNAAYTRNFR
601: EQTFSVAVDL QSSGEDLVYS FQGGTKLQTF KHNTTDVGVG LTSFGGKYYV GGKLEDTLLV GKRVKLTANA GQMRGSGQTA NGGSFEACIR GRDYPVRNEQ
701: IGLTMTALSF KRELVLNYGL QTQFRPARGT NIDVNINMNN RKMGKINVKL NSSEHWEIAL ISALTMFKAL VRRSKTEMTE ENEEEKIVNF LVS
101: QFLRLVQRFG QSQNNILVSK VLYRVHLAML IRAEESELKN VKLRQDRAKA LAREQESSGI PELDFSLRIL VLGKTGVGKS ATINSIFGQP KSETDAFRPG
201: TDRIEEVMGT VSGVKVTFID TPGFHPLSSS STRKNRKILL SIKRYVKKRP PDVVLYLDRL DMIDMRYSDF SLLQLITEIF GAAIWLNTIL VMTHSAATTE
301: GRNGQSVNYE SYVGQRMDVV QHYIHQAVSD TKLENPVLLV ENHPSCKKNL AGEYVLPNGV VWKPQFMFLC VCTKVLGDVQ SLLRFRDSIG LGQPSSTRTA
401: SLPHLLSVFL RRRLSSGADE TEKEIDKLLN LDLEEEDEYD QLPTIRILGK SRFEKLSKSQ KKEYLDELDY RETLYLKKQL KEECRRRRDE KLVEEENLED
501: TEQRDQAAVP LPDMAGPDSF DSDFPAHRYR CVSAGDQWLV RPVYDPQGWD RDVGFDGINI ETAAKINRNL FASATGQVSR DKQRFTIQSE TNAAYTRNFR
601: EQTFSVAVDL QSSGEDLVYS FQGGTKLQTF KHNTTDVGVG LTSFGGKYYV GGKLEDTLLV GKRVKLTANA GQMRGSGQTA NGGSFEACIR GRDYPVRNEQ
701: IGLTMTALSF KRELVLNYGL QTQFRPARGT NIDVNINMNN RKMGKINVKL NSSEHWEIAL ISALTMFKAL VRRSKTEMTE ENEEEKIVNF LVS
Arabidopsis Description
TOC90Translocase of chloroplast 90, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q6S5G3]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.