Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 2
- mitochondrion 1
- plasma membrane 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY44175 | Canola | cytosol | 78.18 | 85.71 |
| Bra033515.1-P | Field mustard | cytosol | 90.03 | 82.76 |
| AT4G15810.1 | Thale cress | cytosol | 53.6 | 59.15 |
| CDX70657 | Canola | cytosol | 5.63 | 19.66 |
| CDY50376 | Canola | cytosol | 11.25 | 16.36 |
| CDX70551 | Canola | cytosol | 5.73 | 16.11 |
| CDY52130 | Canola | cytosol, plastid | 4.74 | 15.34 |
| CDX98810 | Canola | cytosol | 4.74 | 15.34 |
| CDX80936 | Canola | cytosol | 4.74 | 15.34 |
| CDX89987 | Canola | cytosol | 4.44 | 15.1 |
| CDY15228 | Canola | cytosol | 4.44 | 15.1 |
| CDY55323 | Canola | cytosol | 4.34 | 14.81 |
| CDY32453 | Canola | cytosol | 4.24 | 14.48 |
| CDX91288 | Canola | cytosol | 10.96 | 14.12 |
| CDX70658 | Canola | cytosol | 1.78 | 14.06 |
| GSMUA_Achr9P31010_001 | Banana | cytosol | 13.33 | 13.65 |
| KRH02257 | Soybean | cytosol | 11.35 | 13.37 |
| CDX78660 | Canola | cytosol | 8.69 | 13.27 |
| OQU90674 | Sorghum | nucleus | 12.04 | 13.17 |
| Zm00001d010852_P002 | Maize | plastid | 15.7 | 13.17 |
| Solyc01g080780.2.1 | Tomato | nucleus | 14.02 | 12.89 |
| PGSC0003DMT400016119 | Potato | cytosol, nucleus, plastid | 17.18 | 12.78 |
| GSMUA_Achr6P20360_001 | Banana | cytosol | 14.12 | 12.64 |
| GSMUA_Achr9P31000_001 | Banana | cytosol | 13.62 | 12.64 |
| Os03t0835100-00 | Rice | cytosol, plastid | 15.0 | 12.6 |
| CDY35813 | Canola | cytosol | 9.67 | 12.52 |
| TraesCS4A01G358400.1 | Wheat | plastid | 14.51 | 12.33 |
| Os05t0151400-01 | Rice | plastid | 15.79 | 12.25 |
| CDY66172 | Canola | cytosol | 11.85 | 12.17 |
| CDX92471 | Canola | cytosol | 9.38 | 12.13 |
| Zm00001d034755_P001 | Maize | cytosol | 13.82 | 12.13 |
| Zm00001d035812_P003 | Maize | plastid | 15.5 | 12.07 |
| OQU77419 | Sorghum | nucleus | 15.89 | 12.06 |
| Zm00001d012893_P002 | Maize | cytosol, plastid | 13.52 | 12.04 |
| HORVU5Hr1G117690.19 | Barley | plastid | 13.72 | 11.9 |
| CDX92086 | Canola | cytosol, endoplasmic reticulum, vacuole | 12.44 | 11.85 |
| TraesCS5D01G514500.1 | Wheat | cytosol, plastid | 14.12 | 11.83 |
| VIT_05s0020g01290.t01 | Wine grape | cytosol | 14.91 | 11.7 |
| HORVU1Hr1G021840.9 | Barley | nucleus | 16.19 | 11.5 |
| TraesCS5B01G514000.1 | Wheat | cytosol | 13.82 | 11.48 |
| TraesCS1A01G093900.3 | Wheat | cytosol, nucleus, plastid | 15.89 | 11.31 |
| TraesCS1D01G102500.3 | Wheat | cytosol, nucleus, plastid | 15.89 | 11.3 |
| TraesCS1B01G122000.4 | Wheat | cytosol, nucleus, plastid | 15.99 | 11.29 |
| CDY43117 | Canola | cytosol | 12.24 | 11.23 |
| CDX70641 | Canola | cytosol | 8.69 | 10.97 |
| CDX70550 | Canola | cytosol | 3.06 | 10.95 |
| CDX92087 | Canola | cytosol | 12.64 | 10.83 |
| CDX97270 | Canola | cytosol | 4.64 | 10.71 |
| CDX70659 | Canola | cytosol | 0.89 | 8.33 |
| CDX70178 | Canola | cytosol | 6.02 | 8.04 |
| CDX98809 | Canola | cytosol | 1.38 | 3.11 |
| Os01t0356800-00 | Rice | plastid | 14.02 | 2.66 |
| CDX97269 | Canola | cytosol | 0.0 | 0.0 |
Protein Annotations
| Gene3D:1.20.5.430 | Gene3D:3.40.50.300 | MapMan:35.1 | GO:A0A078GBZ3 | UniProt:A0A078GBZ3 | EnsemblPlants:CDY22896 |
| ProteinID:CDY22896 | ProteinID:CDY22896.1 | ncoils:Coil | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003714 |
| GO:GO:0005488 | GO:GO:0005525 | GO:GO:0006139 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 |
| GO:GO:0009987 | GO:GO:1903507 | EnsemblPlantsGene:GSBRNA2T00021263001 | InterPro:G_AIG1 | InterPro:HS1-bd | InterPro:IPR006703 |
| InterPro:P-loop_NTPase | PFAM:PF04548 | PFAM:PF06825 | PANTHER:PTHR10903 | PANTHER:PTHR10903:SF39 | SUPFAM:SSF52540 |
| UniParc:UPI0004EEE364 | SEG:seg | : | : | : | : |
Description
BnaA01g18340DBnaA01g18340D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GBZ3]
Coordinates
chrLK032137:+:146587..155456
Molecular Weight (calculated)
110214.0 Da
IEP (calculated)
4.021
GRAVY (calculated)
-0.542
Length
1013 amino acids
Sequence
(BLAST)
(BLAST)
0001: MLNMEREKQL RGISIIAAEA VNPDKSRGIA IPAVRAVVAD ALLLTRSLSG TFSSAGSVPI RAPITIDDED DDDDDDGSVT DDGFESVSGD ADDEAELEDV
0101: IRVLGEESVG ENGDDVVEEE ASVNYSPLEE ESESEVSEAK VVIPRASLSL NDDEVLGSSG DEEAEMEVTT DRLEDGLISF GDIEDLSLSV PSGGSDDFMV
0201: QNEGSIGSKQ LIEEDGGGSI QESDALMKPG DVEGVEDSVV QLSEGSDSVT GELVSTEEEM VQVNLSDDAS VSFETTGLGV APGDCSEFVV ESEGNAVDVD
0301: KGLDETVNKL VEQGVGQESA SKESDDKIDD GSACEADESM IQGEETIGLG SREPEDEDTE FMVGEAKELT KNACGAECEG ELEIGMNSEC SQVTPTLDSA
0401: TTRNLDVSRG IDVDVNGCGS FIQKDDQETE DEGTQESEDI DRKLPLPDED RASSLRSSFE LANESVENGE QIDKERSMPE KSYVTANDVM ENEKQMAGLI
0501: HNHNHTCLEL GEYEGTGDTK EKLSESTFQN HPEELSSDNS VQLISGRVKE RIEKTKLLKE KIQKIIKGID LCNEDSAVTE VESQQSLVGE DHHTSSELDD
0601: DHVYDGTKTK LPEQELPLGL DFSINVLVIG KTGVGKSATI NSIFGETKSA VGAFRVTTKS AEYIVGNVGG ILITILDTPG LMSSATEERY NQDVLVRKMP
0701: GIVLAENNMS ESTCPDWRLN LLILCCSVKI RCKSGSLVEK PDAFDSSQLR SFTLFCSLWN VLLLGSNQGH ASQSPDDLEE KKRRLLESYP EILWDEQSHE
0801: SLEQEETLPV KNQEDEGKRQ EKESVRRRRG RGRLGFQATK RLGIYLDTCD LHTGFSMGNR GSRKVEQEEG KMVVRMRGSL SVLGLVHVLT SVITCFSVDR
0901: RPSRQKKTIK MDGHDSEDAT KQSTADMTAF VQNLLQQMQS RFQTMSDSII TKNILFLSST LYSFAWISLD DMGGRINELE QSINDLRAEM GVEGTPPAAS
1001: KSGDEPKTPP SST
0101: IRVLGEESVG ENGDDVVEEE ASVNYSPLEE ESESEVSEAK VVIPRASLSL NDDEVLGSSG DEEAEMEVTT DRLEDGLISF GDIEDLSLSV PSGGSDDFMV
0201: QNEGSIGSKQ LIEEDGGGSI QESDALMKPG DVEGVEDSVV QLSEGSDSVT GELVSTEEEM VQVNLSDDAS VSFETTGLGV APGDCSEFVV ESEGNAVDVD
0301: KGLDETVNKL VEQGVGQESA SKESDDKIDD GSACEADESM IQGEETIGLG SREPEDEDTE FMVGEAKELT KNACGAECEG ELEIGMNSEC SQVTPTLDSA
0401: TTRNLDVSRG IDVDVNGCGS FIQKDDQETE DEGTQESEDI DRKLPLPDED RASSLRSSFE LANESVENGE QIDKERSMPE KSYVTANDVM ENEKQMAGLI
0501: HNHNHTCLEL GEYEGTGDTK EKLSESTFQN HPEELSSDNS VQLISGRVKE RIEKTKLLKE KIQKIIKGID LCNEDSAVTE VESQQSLVGE DHHTSSELDD
0601: DHVYDGTKTK LPEQELPLGL DFSINVLVIG KTGVGKSATI NSIFGETKSA VGAFRVTTKS AEYIVGNVGG ILITILDTPG LMSSATEERY NQDVLVRKMP
0701: GIVLAENNMS ESTCPDWRLN LLILCCSVKI RCKSGSLVEK PDAFDSSQLR SFTLFCSLWN VLLLGSNQGH ASQSPDDLEE KKRRLLESYP EILWDEQSHE
0801: SLEQEETLPV KNQEDEGKRQ EKESVRRRRG RGRLGFQATK RLGIYLDTCD LHTGFSMGNR GSRKVEQEEG KMVVRMRGSL SVLGLVHVLT SVITCFSVDR
0901: RPSRQKKTIK MDGHDSEDAT KQSTADMTAF VQNLLQQMQS RFQTMSDSII TKNILFLSST LYSFAWISLD DMGGRINELE QSINDLRAEM GVEGTPPAAS
1001: KSGDEPKTPP SST
001: MESEKPGIVS ILAAATVDSE KPRVSISAVR AIAAARADSF LLTPSSEASS YSNGLDFETD EDETVLEDVV LDGVRVDRLL GEELGGDGSE FQVGVGFIDH
101: LQSEVSGDER GSMKAKVVIP RAVLSLDDDE FDEILGSDVD SEEVRMNYSD KLDDGLMSFG NIEESSLGVP PEGSSDFMAE NEGNSSEASI ELGQNFKQLI
201: EKGDSKSTIN KEDSGGSIHE FDALMKPSDV ERVEDSAVEL AKMGMNDKPE YAGSNIGELV SIEEVMVQEK SSDNVLVSFE SSLGVMTGEC KEFLVESEGN
301: AVDEDKGLDE TVSSLVEQGV GQASTSKESN NRTDVGSVCD ADELIIPRDE SIGSESRDSG DKDAGNMIGK AEEHCENDRG AVSELEKLEC ADEPEIGMSS
401: ESFQLTPTSD SEMIMNLEVA GGIDVVVIGC GSSDQKAEEE SENEGNQESD DTDRKLSLPD EDRASSLISS FETANETVED GNQLISRTMP ENSSVIAYDI
501: MENETMARLI HNHTFMELDE YEGTGDTSEK LTGSSFQNSS ELLSSNHSVE LISERVKERV EKTQLLKEKL QRIIRRTCLS RENSTVTKVA SKMSLAGGEH
601: PTSLGLDHMF DGTKIVLPEQ EFPADLDFSI NVLVIGKTGV GKSATVNSIF GETKSAVGAF GVTTNSANYV VGNVGGIQIS ILDTPGLLSS ATEEQFNQEV
701: LIARCLGIVL AENNMSFFSA NKSSESTCSD WRLNLLILCC SVKIRSKAGS LQKQNTDVEK AGVFGSQLSS FTLFCSLWNV LLNSGHTSHS HDDLEEKKRK
801: LLDSYPEIIW DEQSQECLEQ ETLLVENQES EDVERQHEKG TVLGRVRTRR GRLGFQATKR FGIYLDTSDV HAGFSIGSRD CRRNVQEEGK ILVRMRGSMS
901: VLGLVPMLIS VFTSGKDI
101: LQSEVSGDER GSMKAKVVIP RAVLSLDDDE FDEILGSDVD SEEVRMNYSD KLDDGLMSFG NIEESSLGVP PEGSSDFMAE NEGNSSEASI ELGQNFKQLI
201: EKGDSKSTIN KEDSGGSIHE FDALMKPSDV ERVEDSAVEL AKMGMNDKPE YAGSNIGELV SIEEVMVQEK SSDNVLVSFE SSLGVMTGEC KEFLVESEGN
301: AVDEDKGLDE TVSSLVEQGV GQASTSKESN NRTDVGSVCD ADELIIPRDE SIGSESRDSG DKDAGNMIGK AEEHCENDRG AVSELEKLEC ADEPEIGMSS
401: ESFQLTPTSD SEMIMNLEVA GGIDVVVIGC GSSDQKAEEE SENEGNQESD DTDRKLSLPD EDRASSLISS FETANETVED GNQLISRTMP ENSSVIAYDI
501: MENETMARLI HNHTFMELDE YEGTGDTSEK LTGSSFQNSS ELLSSNHSVE LISERVKERV EKTQLLKEKL QRIIRRTCLS RENSTVTKVA SKMSLAGGEH
601: PTSLGLDHMF DGTKIVLPEQ EFPADLDFSI NVLVIGKTGV GKSATVNSIF GETKSAVGAF GVTTNSANYV VGNVGGIQIS ILDTPGLLSS ATEEQFNQEV
701: LIARCLGIVL AENNMSFFSA NKSSESTCSD WRLNLLILCC SVKIRSKAGS LQKQNTDVEK AGVFGSQLSS FTLFCSLWNV LLNSGHTSHS HDDLEEKKRK
801: LLDSYPEIIW DEQSQECLEQ ETLLVENQES EDVERQHEKG TVLGRVRTRR GRLGFQATKR FGIYLDTSDV HAGFSIGSRD CRRNVQEEGK ILVRMRGSMS
901: VLGLVPMLIS VFTSGKDI
Arabidopsis Description
P-loop containing nucleoside triphosphate hydrolases superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4JKW7]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.