Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS1D01G102500.3 | Wheat | cytosol, nucleus, plastid | 94.67 | 94.74 |
| TraesCS1A01G093900.3 | Wheat | cytosol, nucleus, plastid | 94.46 | 94.59 |
| TraesCS1B01G122000.4 | Wheat | cytosol, nucleus, plastid | 94.46 | 93.87 |
| Os05t0151400-01 | Rice | plastid | 71.67 | 78.25 |
| Zm00001d010852_P002 | Maize | plastid | 64.94 | 76.72 |
| OQU77419 | Sorghum | nucleus | 69.28 | 74.01 |
| Zm00001d035812_P003 | Maize | plastid | 67.18 | 73.64 |
| KRH30746 | Soybean | cytosol | 5.96 | 64.89 |
| CDY50376 | Canola | cytosol | 31.7 | 64.85 |
| CDX97269 | Canola | cytosol | 2.88 | 62.12 |
| GSMUA_Achr9P31010_001 | Banana | cytosol | 42.5 | 61.27 |
| GSMUA_Achr9P31000_001 | Banana | cytosol | 43.2 | 56.41 |
| PGSC0003DMT400029640 | Potato | cytosol | 38.78 | 55.63 |
| HORVU1Hr1G053280.1 | Barley | mitochondrion | 26.16 | 53.52 |
| CDX97270 | Canola | cytosol | 16.27 | 52.85 |
| CDX91288 | Canola | cytosol | 26.79 | 48.6 |
| KRH43000 | Soybean | nucleus | 39.76 | 47.85 |
| Bra018546.1-P | Field mustard | mitochondrion | 29.52 | 47.2 |
| KRH59116 | Soybean | nucleus | 40.74 | 46.85 |
| Solyc01g080780.2.1 | Tomato | nucleus | 34.5 | 44.65 |
| VIT_07s0005g00180.t01 | Wine grape | plastid | 44.95 | 43.75 |
| Solyc09g074940.1.1 | Tomato | plastid | 41.37 | 42.05 |
| GSMUA_Achr6P20360_001 | Banana | cytosol | 33.31 | 42.0 |
| AT4G02510.4 | Thale cress | nucleus | 42.92 | 40.72 |
| VIT_05s0020g01290.t01 | Wine grape | cytosol | 35.97 | 39.74 |
| Bra036261.1-P | Field mustard | nucleus | 43.27 | 39.7 |
| HORVU5Hr1G117690.19 | Barley | plastid | 31.91 | 38.96 |
| PGSC0003DMT400016119 | Potato | cytosol, nucleus, plastid | 37.17 | 38.94 |
| HORVU5Hr1G031380.1 | Barley | mitochondrion | 20.55 | 37.14 |
| HORVU4Hr1G064110.2 | Barley | cytosol | 7.08 | 28.37 |
| KRH02257 | Soybean | cytosol | 15.71 | 26.05 |
| Bra033515.1-P | Field mustard | cytosol | 14.87 | 19.24 |
| AT4G15810.1 | Thale cress | cytosol | 11.71 | 18.19 |
| CDY44175 | Canola | cytosol | 10.94 | 16.88 |
| CDY22896 | Canola | cytosol | 11.5 | 16.19 |
Protein Annotations
| MapMan:23.1.2.2 | Gene3D:3.40.50.300 | UniProt:A0A287EVM0 | ncoils:Coil | GO:GO:0000166 | GO:GO:0003674 |
| GO:GO:0003824 | GO:GO:0005488 | GO:GO:0005525 | GO:GO:0016787 | GO:GO:0016817 | InterPro:G_AIG1 |
| EnsemblPlantsGene:HORVU1Hr1G021840 | EnsemblPlants:HORVU1Hr1G021840.9 | InterPro:IPR006703 | InterPro:P-loop_NTPase | PFAM:PF04548 | PFAM:PF11886 |
| PFscan:PS51720 | PANTHER:PTHR10903 | PANTHER:PTHR10903:SF39 | SUPFAM:SSF52540 | TIGRFAMs:TIGR00993 | InterPro:TOC159_MAD |
| InterPro:Toc86_159 | UniParc:UPI000B471A6D | SEG:seg | : | : | : |
Description
No Description!
Coordinates
chrchr1H:+:89367151..89372260
Molecular Weight (calculated)
152481.0 Da
IEP (calculated)
4.133
GRAVY (calculated)
-0.555
Length
1426 amino acids
Sequence
(BLAST)
(BLAST)
0001: MATTDARAAP VADERPPAAD ADEVAAAEGT KSAGAAPEEV GGVGEGEEVR FEGKDRSFTG SEANNGGAEE AEDGGEVEPA VRDGKDASEG EGEGKEEAAA
0101: AAKEQEEGDR GLTVEDVKAA LLVQAPVAVK PESDNGELGE GAASLPSPDA PVGEEKPELT GEPEESATLE VKEVSNVAVD AELSEEKPEA EKLAEVATGG
0201: EDDGEFDSEK AVTASTRSME AAEPEDKVAP TAEANGNLGG EAEEPAEMVA VGGEEAKEAS LENEADVEDK PAKQEPESDA SPVVTDGGNR VDVEDEAVKP
0301: EPESTASPVV VDNGTVENHA NVEEEAAKPD LVNDASPVQN HANVEDEAAK PDPVNDASPV VIDNGSLDYQ ANEKDEAAKP EPENDASPEV SVINDISSES
0401: LVKLAPSSAD IPLTESNEKA QNAEDQVVAS GSVENVGVEK PTEVESVVAG GDDVILSREL APEPVKENND YVDENEPAAE VISHKEEAGD DEIVMVAAAD
0501: DQKTVDAADE EDTGGEENDG AEDVADHEVE AVDDEIVLAA ADEEDGSGNE GDEDDDEVSF DRSPARVAII ENSEAAKQIM KELGEGSSSG SPVSGLSSSR
0601: EYTNSMDGQI VLDDSEDDDD DDDNEDDDEK GFDSAALAAL LKAATGASPD GNITVSSQDG SRIFSMDRPA GLGSSAPSLR PTAPRQPARS NLFSPSELAV
0701: TAEPNDEMTE EEKKLHDKVE LIRVKFLRLV YKLGATPEET VAAQVLYRLS LAEGIRHGRQ TNRAFSLENA RKKALLLEAE GKEDLSFSCN ILVLGKIGVG
0801: KSATINSIFG EVKSKTDAFG AATTSVREIV GNVDGVKIRI IDTPGLRPNV MDQGANRKIL SSVKKYTKRC PPDIVLYVDR LDSLSRDLND LPLLKTITSV
0901: LGSSIWFNAI VALTHAASAP PEGLNGAPMT YEVLMAQRSH IIQQSIRQAA GDMRLMNPVA LVENHPSCRK NREGQKVLPN GQSWRHQMLL LCYSSKILSE
1001: ANSLLKLQDP SPGKLFGFRF RSPPLPFLLS SLLQSRAHPK LSPDQGGNEG DSDIDLDEYS DIEQDEDEEE YDQLPPFKPL TKAQLARLTK EQKNAYFDEY
1101: DYRVKLLQKK QWKDELRRLK EMKKRGKSDM DAYGYASIAG ENDQDPPPEN VSVPLPDMVL PPSFDCDNPT YRYRFLEPTS TVLARPVLDA HGWDHDCGYD
1201: GVSVEESLAL LNKFPGTVAV QVTKDKKEFS IHLDSSISAK HGEDASSLAG FDIQTVGRQL AYILRGETKF KSIKKNKTTG GFSVTFLGDI VATGLKVEDQ
1301: LSVGKRLALV ASTGAMRAQG DTAYGANLEA RLKDKDYPIG QSLSTLGLSL MKWRRDLALG ANLQSQFSIG RGSKMAVRLG LNNKLSGQIT VRTSTSEQVQ
1401: IALLGLVPVI ASIYRSFRPG EPSFAY
0101: AAKEQEEGDR GLTVEDVKAA LLVQAPVAVK PESDNGELGE GAASLPSPDA PVGEEKPELT GEPEESATLE VKEVSNVAVD AELSEEKPEA EKLAEVATGG
0201: EDDGEFDSEK AVTASTRSME AAEPEDKVAP TAEANGNLGG EAEEPAEMVA VGGEEAKEAS LENEADVEDK PAKQEPESDA SPVVTDGGNR VDVEDEAVKP
0301: EPESTASPVV VDNGTVENHA NVEEEAAKPD LVNDASPVQN HANVEDEAAK PDPVNDASPV VIDNGSLDYQ ANEKDEAAKP EPENDASPEV SVINDISSES
0401: LVKLAPSSAD IPLTESNEKA QNAEDQVVAS GSVENVGVEK PTEVESVVAG GDDVILSREL APEPVKENND YVDENEPAAE VISHKEEAGD DEIVMVAAAD
0501: DQKTVDAADE EDTGGEENDG AEDVADHEVE AVDDEIVLAA ADEEDGSGNE GDEDDDEVSF DRSPARVAII ENSEAAKQIM KELGEGSSSG SPVSGLSSSR
0601: EYTNSMDGQI VLDDSEDDDD DDDNEDDDEK GFDSAALAAL LKAATGASPD GNITVSSQDG SRIFSMDRPA GLGSSAPSLR PTAPRQPARS NLFSPSELAV
0701: TAEPNDEMTE EEKKLHDKVE LIRVKFLRLV YKLGATPEET VAAQVLYRLS LAEGIRHGRQ TNRAFSLENA RKKALLLEAE GKEDLSFSCN ILVLGKIGVG
0801: KSATINSIFG EVKSKTDAFG AATTSVREIV GNVDGVKIRI IDTPGLRPNV MDQGANRKIL SSVKKYTKRC PPDIVLYVDR LDSLSRDLND LPLLKTITSV
0901: LGSSIWFNAI VALTHAASAP PEGLNGAPMT YEVLMAQRSH IIQQSIRQAA GDMRLMNPVA LVENHPSCRK NREGQKVLPN GQSWRHQMLL LCYSSKILSE
1001: ANSLLKLQDP SPGKLFGFRF RSPPLPFLLS SLLQSRAHPK LSPDQGGNEG DSDIDLDEYS DIEQDEDEEE YDQLPPFKPL TKAQLARLTK EQKNAYFDEY
1101: DYRVKLLQKK QWKDELRRLK EMKKRGKSDM DAYGYASIAG ENDQDPPPEN VSVPLPDMVL PPSFDCDNPT YRYRFLEPTS TVLARPVLDA HGWDHDCGYD
1201: GVSVEESLAL LNKFPGTVAV QVTKDKKEFS IHLDSSISAK HGEDASSLAG FDIQTVGRQL AYILRGETKF KSIKKNKTTG GFSVTFLGDI VATGLKVEDQ
1301: LSVGKRLALV ASTGAMRAQG DTAYGANLEA RLKDKDYPIG QSLSTLGLSL MKWRRDLALG ANLQSQFSIG RGSKMAVRLG LNNKLSGQIT VRTSTSEQVQ
1401: IALLGLVPVI ASIYRSFRPG EPSFAY
0001: MDSKSVTPEP TNPFYASSGQ SGKTYASVVA AAAAAAADKE DGGAVSSAKE LDSSSEAVSG NSDKVGADDL SDSEKEKPNL VGDGKVSDEV DGSLKEDSTT
0101: PEATPKPEVV SGETIGVDDV SSLSPKPEAV SDGVGVVEEN KKVKEDVEDI KDDGESKIEN GSVDVDVKQA STDGESESKV KDVEEEDVGT KKDDEGESEL
0201: GGKVDVDDKS DNVIEEEGVE LTDKGDVIVN SSPVESVHVD VAKPGVVVVG DAEGSEELKI NADAETLEVA NKFDQIGDDD SGEFEPVSDK AIEEVEEKFT
0301: SESDSIADSS KLESVDTSAV EPEVVAAESG SEPKDVEKAN GLEKGMTYAE VIKAASAVAD NGTKEEESVL GGIVDDAEEG VKLNNKGDFV VDSSAIEAVN
0401: VDVAKPGVVV VGDVEVSEVL ETDGNIPDVH NKFDPIGQGE GGEVELESDK ATEEGGGKLV SEGDSMVDSS VVDSVDADIN VAEPGVVVVG AAKEAVIKED
0501: DKDDEVDKTI SNIEEPDDLT AAYDGNFELA VKEISEAAKV EPDEPKVGVE VEELPVSESL KVGSVDAEED SIPAAESQFE VRKVVEGDSA EEDENKLPVE
0601: DIVSSREFSF GGKEVDQEPS GEGVTRVDGS ESEEETEEMI FGSSEAAKQF LAELEKASSG IEAHSDEANI SNNMSDRIDG QIVTDSDEDV DTEDEGEEKM
0701: FDTAALAALL KAATGGGSSE GGNFTITSQD GTKLFSMDRP AGLSSSLRPL KPAAAPRANR SNIFSNSNVT MADETEINLS EEEKQKLEKL QSLRVKFLRL
0801: LQRLGHSAED SIAAQVLYRL ALLAGRQAGQ LFSLDAAKKK AVESEAEGNE ELIFSLNILV LGKAGVGKSA TINSILGNQI ASIDAFGLST TSVREISGTV
0901: NGVKITFIDT PGLKSAAMDQ STNAKMLSSV KKVMKKCPPD IVLYVDRLDT QTRDLNNLPL LRTITASLGT SIWKNAIVTL THAASAPPDG PSGTPLSYDV
1001: FVAQCSHIVQ QSIGQAVGDL RLMNPSLMNP VSLVENHPLC RKNREGVKVL PNGQTWRSQL LLLCYSLKVL SETNSLLRPQ EPLDHRKVFG FRVRSPPLPY
1101: LLSWLLQSRA HPKLPGDQGG DSVDSDIEID DVSDSEQEDG EDDEYDQLPP FKPLRKTQLA KLSNEQRKAY FEEYDYRVKL LQKKQWREEL KRMKEMKKNG
1201: KKLGESEFGY PGEEDDPENG APAAVPVPLP DMVLPPSFDS DNSAYRYRYL EPTSQLLTRP VLDTHGWDHD CGYDGVNAEH SLALASRFPA TATVQVTKDK
1301: KEFNIHLDSS VSAKHGENGS TMAGFDIQNV GKQLAYVVRG ETKFKNLRKN KTTVGGSVTF LGENIATGVK LEDQIALGKR LVLVGSTGTM RSQGDSAYGA
1401: NLEVRLREAD FPIGQDQSSF GLSLVKWRGD LALGANLQSQ VSVGRNSKIA LRAGLNNKMS GQITVRTSSS DQLQIALTAI LPIAMSIYKS IRPEATNDKY
1501: SMY
0101: PEATPKPEVV SGETIGVDDV SSLSPKPEAV SDGVGVVEEN KKVKEDVEDI KDDGESKIEN GSVDVDVKQA STDGESESKV KDVEEEDVGT KKDDEGESEL
0201: GGKVDVDDKS DNVIEEEGVE LTDKGDVIVN SSPVESVHVD VAKPGVVVVG DAEGSEELKI NADAETLEVA NKFDQIGDDD SGEFEPVSDK AIEEVEEKFT
0301: SESDSIADSS KLESVDTSAV EPEVVAAESG SEPKDVEKAN GLEKGMTYAE VIKAASAVAD NGTKEEESVL GGIVDDAEEG VKLNNKGDFV VDSSAIEAVN
0401: VDVAKPGVVV VGDVEVSEVL ETDGNIPDVH NKFDPIGQGE GGEVELESDK ATEEGGGKLV SEGDSMVDSS VVDSVDADIN VAEPGVVVVG AAKEAVIKED
0501: DKDDEVDKTI SNIEEPDDLT AAYDGNFELA VKEISEAAKV EPDEPKVGVE VEELPVSESL KVGSVDAEED SIPAAESQFE VRKVVEGDSA EEDENKLPVE
0601: DIVSSREFSF GGKEVDQEPS GEGVTRVDGS ESEEETEEMI FGSSEAAKQF LAELEKASSG IEAHSDEANI SNNMSDRIDG QIVTDSDEDV DTEDEGEEKM
0701: FDTAALAALL KAATGGGSSE GGNFTITSQD GTKLFSMDRP AGLSSSLRPL KPAAAPRANR SNIFSNSNVT MADETEINLS EEEKQKLEKL QSLRVKFLRL
0801: LQRLGHSAED SIAAQVLYRL ALLAGRQAGQ LFSLDAAKKK AVESEAEGNE ELIFSLNILV LGKAGVGKSA TINSILGNQI ASIDAFGLST TSVREISGTV
0901: NGVKITFIDT PGLKSAAMDQ STNAKMLSSV KKVMKKCPPD IVLYVDRLDT QTRDLNNLPL LRTITASLGT SIWKNAIVTL THAASAPPDG PSGTPLSYDV
1001: FVAQCSHIVQ QSIGQAVGDL RLMNPSLMNP VSLVENHPLC RKNREGVKVL PNGQTWRSQL LLLCYSLKVL SETNSLLRPQ EPLDHRKVFG FRVRSPPLPY
1101: LLSWLLQSRA HPKLPGDQGG DSVDSDIEID DVSDSEQEDG EDDEYDQLPP FKPLRKTQLA KLSNEQRKAY FEEYDYRVKL LQKKQWREEL KRMKEMKKNG
1201: KKLGESEFGY PGEEDDPENG APAAVPVPLP DMVLPPSFDS DNSAYRYRYL EPTSQLLTRP VLDTHGWDHD CGYDGVNAEH SLALASRFPA TATVQVTKDK
1301: KEFNIHLDSS VSAKHGENGS TMAGFDIQNV GKQLAYVVRG ETKFKNLRKN KTTVGGSVTF LGENIATGVK LEDQIALGKR LVLVGSTGTM RSQGDSAYGA
1401: NLEVRLREAD FPIGQDQSSF GLSLVKWRGD LALGANLQSQ VSVGRNSKIA LRAGLNNKMS GQITVRTSSS DQLQIALTAI LPIAMSIYKS IRPEATNDKY
1501: SMY
Arabidopsis Description
TOC159Translocase of chloroplast 159, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:O81283]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.